RNA–Protein interactions for RNA: ENST00000475980.1

COL11A1-209, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-209ENST00000475980 MORC1Q86VD1 984 aa8.61□□□□□ -1.03
COL11A1-209ENST00000475980 APOBEC3FQ8IUX4 373 aaKnown RBP8.61□□□□□ -1.03
COL11A1-209ENST00000475980 RAPGEFL1Q9UHV5 662 aa8.61□□□□□ -1.03
COL11A1-209ENST00000475980 ANGEL1Q9UNK9 670 aaKnown RBP8.61□□□□□ -1.03
COL11A1-209ENST00000475980 NSFL1CQ9UNZ2 370 aaKnown RBP8.61□□□□□ -1.03
COL11A1-209ENST00000475980 SOBPA7XYQ1 873 aa8.6□□□□□ -1.03
COL11A1-209ENST00000475980 C6orf229H3BNL8 230 aa8.6□□□□□ -1.03
COL11A1-209ENST00000475980 WNT10BO00744 389 aa8.6□□□□□ -1.03
COL11A1-209ENST00000475980 TTLL7Q6ZT98 887 aa8.6□□□□□ -1.03
COL11A1-209ENST00000475980 TBC1D16Q8TBP0 767 aa8.6□□□□□ -1.03
COL11A1-209ENST00000475980 ZBTB3Q9H5J0 574 aa8.6□□□□□ -1.03
COL11A1-209ENST00000475980 ZFYVE28Q9HCC9 887 aa8.6□□□□□ -1.03
COL11A1-209ENST00000475980 PODXL2Q9NZ53 605 aa8.6□□□□□ -1.03
COL11A1-209ENST00000475980 SCAF8Q9UPN6 1271 aaKnown RBP8.6□□□□□ -1.03
COL11A1-209ENST00000475980 FAM205AQ6ZU69 1335 aa8.59□□□□□ -1.03
COL11A1-209ENST00000475980 CCL5P13501 91 aa8.59□□□□□ -1.03
COL11A1-209ENST00000475980 GPSM2P81274 684 aa8.59□□□□□ -1.03
COL11A1-209ENST00000475980 LACTBP83111 547 aaPredicted RBP8.59□□□□□ -1.03
COL11A1-209ENST00000475980 FUT2Q10981 343 aa8.59□□□□□ -1.03
COL11A1-209ENST00000475980 U2AF1L4Q8WU68 220 aaKnown RBP8.59□□□□□ -1.03
COL11A1-209ENST00000475980 CLMNQ96JQ2 1002 aa8.59□□□□□ -1.03
COL11A1-209ENST00000475980 SNX27Q96L92 541 aa8.59□□□□□ -1.03
COL11A1-209ENST00000475980 ZC3H12CQ9C0D7 883 aaKnown RBP8.59□□□□□ -1.03
COL11A1-209ENST00000475980 ZCCHC17Q9NP64 241 aaKnown RBP8.59□□□□□ -1.03
COL11A1-209ENST00000475980 COL3A1P02461 1466 aaPredicted RBP8.58□□□□□ -1.04
COL11A1-209ENST00000475980 K7ELQ4 463 aaPredicted RBP8.58□□□□□ -1.04
COL11A1-209ENST00000475980 PPP1R12BO60237 982 aaPredicted RBP8.58□□□□□ -1.04
COL11A1-209ENST00000475980 GRK4P32298 578 aa8.58□□□□□ -1.04
COL11A1-209ENST00000475980 GJA5P36382 358 aa8.58□□□□□ -1.04
COL11A1-209ENST00000475980 PRKG1Q13976 671 aa8.58□□□□□ -1.04
COL11A1-209ENST00000475980 KIF22Q14807 665 aa8.58□□□□□ -1.04
COL11A1-209ENST00000475980 TAF1CQ15572 869 aaPredicted RBP8.58□□□□□ -1.04
COL11A1-209ENST00000475980 SVOPQ8N4V2 548 aa8.58□□□□□ -1.04
COL11A1-209ENST00000475980 CNTNAP3BQ96NU0 1288 aa8.58□□□□□ -1.04
COL11A1-209ENST00000475980 SPOCK3Q9BQ16 436 aa8.58□□□□□ -1.04
COL11A1-209ENST00000475980 CNTNAP3Q9BZ76 1288 aa8.58□□□□□ -1.04
COL11A1-209ENST00000475980 PPP2R3BQ9Y5P8 575 aa8.58□□□□□ -1.04
COL11A1-209ENST00000475980 SH3TC1Q8TE82 1336 aa8.57□□□□□ -1.04
COL11A1-209ENST00000475980 MYO3BQ8WXR4 1341 aa8.57□□□□□ -1.04
COL11A1-209ENST00000475980 IRS2Q9Y4H2 1338 aa8.57□□□□□ -1.04
COL11A1-209ENST00000475980 USP17L3A6NCW0 530 aa8.57□□□□□ -1.04
COL11A1-209ENST00000475980 USP17L4A6NCW7 530 aa8.57□□□□□ -1.04
COL11A1-209ENST00000475980 TLR2O60603 784 aa8.57□□□□□ -1.04
COL11A1-209ENST00000475980 DIAPH1O60610 1272 aaKnown RBP8.57□□□□□ -1.04
COL11A1-209ENST00000475980 PPFIA3O75145 1194 aa8.57□□□□□ -1.04
COL11A1-209ENST00000475980 SGPL1O95470 568 aa8.57□□□□□ -1.04
COL11A1-209ENST00000475980 HCLS1P14317 486 aaPredicted RBP8.57□□□□□ -1.04
COL11A1-209ENST00000475980 MARSP56192 900 aaKnown RBP8.57□□□□□ -1.04
COL11A1-209ENST00000475980 KRT76Q01546 638 aa8.57□□□□□ -1.04
COL11A1-209ENST00000475980 MAP3K12Q12852 859 aa8.57□□□□□ -1.04
COL11A1-209ENST00000475980 E2F4Q16254 413 aa8.57□□□□□ -1.04
COL11A1-209ENST00000475980 USP17L1Q7RTZ2 530 aa8.57□□□□□ -1.04
COL11A1-209ENST00000475980 PODNQ7Z5L7 613 aa8.57□□□□□ -1.04
COL11A1-209ENST00000475980 OGFOD1Q8N543 542 aa8.57□□□□□ -1.04
COL11A1-209ENST00000475980 HELBQ8NG08 1087 aaPredicted RBP8.57□□□□□ -1.04
COL11A1-209ENST00000475980 MAFAQ8NHW3 353 aaPredicted RBP8.57□□□□□ -1.04
COL11A1-209ENST00000475980 ARHGAP39Q9C0H5 1083 aa8.57□□□□□ -1.04
COL11A1-209ENST00000475980 RNF208Q9H0X6 261 aa8.57□□□□□ -1.04
COL11A1-209ENST00000475980 SRRDQ9UH36 339 aa8.57□□□□□ -1.04
COL11A1-209ENST00000475980 MGAMO43451 1857 aa8.57□□□□□ -1.04
COL11A1-209ENST00000475980 WDHD1O75717 1129 aaPredicted RBP8.56□□□□□ -1.04
COL11A1-209ENST00000475980 MAGEA10P43363 369 aaPredicted RBP8.56□□□□□ -1.04
COL11A1-209ENST00000475980 MMP16P51512 607 aa8.56□□□□□ -1.04
COL11A1-209ENST00000475980 UBXN2AP68543 259 aa8.56□□□□□ -1.04
COL11A1-209ENST00000475980 SF3B3Q15393 1217 aaKnown RBP8.56□□□□□ -1.04
COL11A1-209ENST00000475980 ZNF385CQ66K41 422 aaPredicted RBP8.56□□□□□ -1.04
COL11A1-209ENST00000475980 MRPL14Q6P1L8 145 aaKnown RBP8.56□□□□□ -1.04
COL11A1-209ENST00000475980 NLRP10Q86W26 655 aa8.56□□□□□ -1.04
COL11A1-209ENST00000475980 ANKRD13AQ8IZ07 590 aa8.56□□□□□ -1.04
COL11A1-209ENST00000475980 NGEFQ8N5V2 710 aa8.56□□□□□ -1.04
COL11A1-209ENST00000475980 BRI3BPQ8WY22 251 aa8.56□□□□□ -1.04
COL11A1-209ENST00000475980 CELF1Q92879 486 aaKnown RBP8.56□□□□□ -1.04
COL11A1-209ENST00000475980 ZBED3Q96IU2 234 aaPredicted RBP8.56□□□□□ -1.04
COL11A1-209ENST00000475980 DEFB129Q9H1M3 183 aa8.56□□□□□ -1.04
COL11A1-209ENST00000475980 RIPOR2Q9Y4F9 1068 aa8.56□□□□□ -1.04
COL11A1-209ENST00000475980 TMEM265A0A087WTH1 108 aa8.55□□□□□ -1.04
COL11A1-209ENST00000475980 IREB2P48200 963 aaKnown RBP8.55□□□□□ -1.04
COL11A1-209ENST00000475980 PTGDRQ13258 359 aa8.55□□□□□ -1.04
COL11A1-209ENST00000475980 PLA2G4EQ3MJ16 856 aa8.55□□□□□ -1.04
COL11A1-209ENST00000475980 HSP90AB3PQ58FF7 597 aa8.55□□□□□ -1.04
COL11A1-209ENST00000475980 SCARF2Q96GP6 870 aaPredicted RBP8.55□□□□□ -1.04
COL11A1-209ENST00000475980 PURBQ96QR8 312 aaKnown RBP8.55□□□□□ -1.04
COL11A1-209ENST00000475980 FZD1Q9UP38 647 aa8.55□□□□□ -1.04
COL11A1-209ENST00000475980 ADGRA2Q96PE1 1338 aa8.54□□□□□ -1.04
COL11A1-209ENST00000475980 DNAH12Q6ZR08 3092 aa8.54□□□□□ -1.04
COL11A1-209ENST00000475980 UFL1O94874 794 aa8.54□□□□□ -1.04
COL11A1-209ENST00000475980 SASH1O94885 1247 aa8.54□□□□□ -1.04
COL11A1-209ENST00000475980 HOXD10P28358 340 aa8.54□□□□□ -1.04
COL11A1-209ENST00000475980 GTF2A2P52657 109 aa8.54□□□□□ -1.04
COL11A1-209ENST00000475980 SUPT20HL1Q3ZLR7 823 aa8.54□□□□□ -1.04
COL11A1-209ENST00000475980 DACT2Q5SW24 774 aa8.54□□□□□ -1.04
COL11A1-209ENST00000475980 RNF19BQ6ZMZ0 732 aa8.54□□□□□ -1.04
COL11A1-209ENST00000475980 LRP10Q7Z4F1 713 aa8.54□□□□□ -1.04
COL11A1-209ENST00000475980 NECAB2Q7Z6G3 386 aa8.54□□□□□ -1.04
COL11A1-209ENST00000475980 RAET1EQ8TD07 263 aa8.54□□□□□ -1.04
COL11A1-209ENST00000475980 OPTNQ96CV9 577 aa8.54□□□□□ -1.04
COL11A1-209ENST00000475980 UBE2OQ9C0C9 1292 aaKnown RBP8.54□□□□□ -1.04
COL11A1-209ENST00000475980 PANK3Q9H999 370 aa8.54□□□□□ -1.04
COL11A1-209ENST00000475980 PAK6Q9NQU5 681 aaPredicted RBP8.54□□□□□ -1.04
COL11A1-209ENST00000475980 GGA1Q9UJY5 639 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms