RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 GYG1P46976 350 aa12.79□□□□□ -0.36
CCHCR1-212ENST00000475684 PI4KAP1Q8N8J0 262 aa12.79□□□□□ -0.36
CCHCR1-212ENST00000475684 FAM151AQ8WW52 585 aa12.79□□□□□ -0.36
CCHCR1-212ENST00000475684 TRIB2Q92519 343 aa12.79□□□□□ -0.36
CCHCR1-212ENST00000475684 ZDHHC15Q96MV8 337 aa12.79□□□□□ -0.36
CCHCR1-212ENST00000475684 SENP6Q9GZR1 1112 aaPredicted RBP12.79□□□□□ -0.36
CCHCR1-212ENST00000475684 GJD2Q9UKL4 321 aa12.79□□□□□ -0.36
CCHCR1-212ENST00000475684 RPAP1Q9BWH6 1393 aaPredicted RBP12.79□□□□□ -0.36
CCHCR1-212ENST00000475684 IFIT5Q13325 482 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-212ENST00000475684 FAM110CQ1W6H9 321 aa12.78□□□□□ -0.36
CCHCR1-212ENST00000475684 MAP3K21Q5TCX8 1036 aa12.78□□□□□ -0.36
CCHCR1-212ENST00000475684 APOBEC3HQ6NTF7 200 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-212ENST00000475684 PPM1EQ8WY54 764 aa12.78□□□□□ -0.36
CCHCR1-212ENST00000475684 PCGF6Q9BYE7 350 aa12.78□□□□□ -0.36
CCHCR1-212ENST00000475684 PICK1Q9NRD5 415 aa12.78□□□□□ -0.36
CCHCR1-212ENST00000475684 TRIM35Q9UPQ4 493 aa12.78□□□□□ -0.36
CCHCR1-212ENST00000475684 CYP2B6P20813 491 aa12.77□□□□□ -0.37
CCHCR1-212ENST00000475684 TCP10Q12799 353 aa12.77□□□□□ -0.37
CCHCR1-212ENST00000475684 CHAF1AQ13111 956 aaPredicted RBP12.77□□□□□ -0.37
CCHCR1-212ENST00000475684 GRIN2CQ14957 1233 aa12.77□□□□□ -0.37
CCHCR1-212ENST00000475684 LHX8Q68G74 356 aa12.77□□□□□ -0.37
CCHCR1-212ENST00000475684 IL27Q8NEV9 243 aa12.77□□□□□ -0.37
CCHCR1-212ENST00000475684 FAM84BQ96KN1 310 aaPredicted RBP12.77□□□□□ -0.37
CCHCR1-212ENST00000475684 SNX27Q96L92 541 aa12.77□□□□□ -0.37
CCHCR1-212ENST00000475684 MBIPQ9NS73 344 aa12.77□□□□□ -0.37
CCHCR1-212ENST00000475684 AFG3L2Q9Y4W6 797 aa12.77□□□□□ -0.37
CCHCR1-212ENST00000475684 PTPRAP18433 802 aa12.76□□□□□ -0.37
CCHCR1-212ENST00000475684 ATN1P54259 1190 aaPredicted RBP12.76□□□□□ -0.37
CCHCR1-212ENST00000475684 MRPS5P82675 430 aaKnown RBP12.76□□□□□ -0.37
CCHCR1-212ENST00000475684 SCYL3Q8IZE3 742 aa12.76□□□□□ -0.37
CCHCR1-212ENST00000475684 TBC1D22AQ8WUA7 517 aa12.76□□□□□ -0.37
CCHCR1-212ENST00000475684 MRIQ9BWK5 157 aa12.76□□□□□ -0.37
CCHCR1-212ENST00000475684 CNNM1Q9NRU3 951 aa12.76□□□□□ -0.37
CCHCR1-212ENST00000475684 THEGQ9P2T0 379 aa12.76□□□□□ -0.37
CCHCR1-212ENST00000475684 PNMA3Q9UL41 463 aa12.76□□□□□ -0.37
CCHCR1-212ENST00000475684 IQSEC3Q9UPP2 1182 aaPredicted RBP12.76□□□□□ -0.37
CCHCR1-212ENST00000475684 AGTPBP1Q9UPW5 1226 aa12.76□□□□□ -0.37
CCHCR1-212ENST00000475684 CHMP3Q9Y3E7 222 aa12.76□□□□□ -0.37
CCHCR1-212ENST00000475684 A0A1B0GUL6 1792 aa12.76□□□□□ -0.37
CCHCR1-212ENST00000475684 FRAT2O75474 233 aaPredicted RBP12.75□□□□□ -0.37
CCHCR1-212ENST00000475684 CACNB2Q08289 660 aaPredicted RBP12.75□□□□□ -0.37
CCHCR1-212ENST00000475684 TRIM26Q12899 539 aaPredicted RBP12.75□□□□□ -0.37
CCHCR1-212ENST00000475684 GCKRQ14397 625 aa12.75□□□□□ -0.37
CCHCR1-212ENST00000475684 PDE3AQ14432 1141 aa12.75□□□□□ -0.37
CCHCR1-212ENST00000475684 CCDC30Q5VVM6 783 aa12.75□□□□□ -0.37
CCHCR1-212ENST00000475684 LDHAL6AQ6ZMR3 332 aa12.75□□□□□ -0.37
CCHCR1-212ENST00000475684 ALYREFQ86V81 257 aaKnown RBP12.75□□□□□ -0.37
CCHCR1-212ENST00000475684 TRIM75PA6NK02 468 aa12.74□□□□□ -0.37
CCHCR1-212ENST00000475684 CCND3P30281 292 aaPredicted RBP12.74□□□□□ -0.37
CCHCR1-212ENST00000475684 GCLCP48506 637 aaPredicted RBP12.74□□□□□ -0.37
CCHCR1-212ENST00000475684 CASP7P55210 303 aa12.74□□□□□ -0.37
CCHCR1-212ENST00000475684 UBE4AQ14139 1066 aa12.74□□□□□ -0.37
CCHCR1-212ENST00000475684 TAF7LQ5H9L4 462 aa12.74□□□□□ -0.37
CCHCR1-212ENST00000475684 TREML2Q5T2D2 321 aa12.74□□□□□ -0.37
CCHCR1-212ENST00000475684 VPS37DQ86XT2 251 aa12.74□□□□□ -0.37
CCHCR1-212ENST00000475684 CCDC146Q8IYE0 955 aa12.74□□□□□ -0.37
CCHCR1-212ENST00000475684 BADQ92934 168 aa12.74□□□□□ -0.37
CCHCR1-212ENST00000475684 ZNF594Q96JF6 807 aaPredicted RBP12.74□□□□□ -0.37
CCHCR1-212ENST00000475684 PRDM5Q9NQX1 630 aaPredicted RBP12.74□□□□□ -0.37
CCHCR1-212ENST00000475684 ATP11BQ9Y2G3 1177 aa12.74□□□□□ -0.37
CCHCR1-212ENST00000475684 PHF20L1A8MW92 1017 aa12.73□□□□□ -0.37
CCHCR1-212ENST00000475684 ZKSCAN1P17029 563 aaPredicted RBP12.73□□□□□ -0.37
CCHCR1-212ENST00000475684 RTP1P59025 263 aa12.73□□□□□ -0.37
CCHCR1-212ENST00000475684 HHIPL2Q6UWX4 724 aa12.73□□□□□ -0.37
CCHCR1-212ENST00000475684 TRMT44Q8IYL2 757 aaKnown RBP12.73□□□□□ -0.37
CCHCR1-212ENST00000475684 LRFN3Q9BTN0 628 aa12.73□□□□□ -0.37
CCHCR1-212ENST00000475684 CHMP4AQ9BY43 222 aa12.73□□□□□ -0.37
CCHCR1-212ENST00000475684 MAST2Q6P0Q8 1798 aa12.73□□□□□ -0.37
CCHCR1-212ENST00000475684 LTBP2Q14767 1821 aa12.72□□□□□ -0.37
CCHCR1-212ENST00000475684 MAST3O60307 1309 aa12.72□□□□□ -0.37
CCHCR1-212ENST00000475684 XRCC5P13010 732 aaKnown RBP12.72□□□□□ -0.37
CCHCR1-212ENST00000475684 C8orf58Q8NAV2 365 aa12.72□□□□□ -0.37
CCHCR1-212ENST00000475684 NUDT12Q9BQG2 462 aa12.72□□□□□ -0.37
CCHCR1-212ENST00000475684 MYH16Q9H6N6 1097 aa12.72□□□□□ -0.37
CCHCR1-212ENST00000475684 LRRFIP2Q9Y608 721 aaKnown RBP12.72□□□□□ -0.37
CCHCR1-212ENST00000475684 FOXO4P98177 505 aa12.71□□□□□ -0.37
CCHCR1-212ENST00000475684 NFIAQ12857 509 aa12.71□□□□□ -0.37
CCHCR1-212ENST00000475684 CCDC57Q2TAC2 916 aa12.71□□□□□ -0.37
CCHCR1-212ENST00000475684 POTEEQ6S8J3 1075 aa12.71□□□□□ -0.37
CCHCR1-212ENST00000475684 RNPC3Q96LT9 517 aaKnown RBP12.71□□□□□ -0.37
CCHCR1-212ENST00000475684 NECAB3Q96P71 396 aaPredicted RBP12.71□□□□□ -0.37
CCHCR1-212ENST00000475684 GAS2L1Q99501 681 aaPredicted RBP12.71□□□□□ -0.37
CCHCR1-212ENST00000475684 ZNF576Q9H609 170 aa12.71□□□□□ -0.37
CCHCR1-212ENST00000475684 BDP1A6H8Y1 2624 aa12.71□□□□□ -0.38
CCHCR1-212ENST00000475684 DNAJB2P25686 324 aa12.7□□□□□ -0.38
CCHCR1-212ENST00000475684 PABPC4Q13310 644 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCHCR1-212ENST00000475684 CCDC85BQ15834 202 aaPredicted RBP12.7□□□□□ -0.38
CCHCR1-212ENST00000475684 CDC42EP5Q6NZY7 148 aa12.7□□□□□ -0.38
CCHCR1-212ENST00000475684 FBXO33Q7Z6M2 555 aa12.7□□□□□ -0.38
CCHCR1-212ENST00000475684 ZFPM1Q8IX07 1006 aa12.7□□□□□ -0.38
CCHCR1-212ENST00000475684 SOCS4Q8WXH5 440 aa12.7□□□□□ -0.38
CCHCR1-212ENST00000475684 FAM198AQ9UFP1 575 aa12.7□□□□□ -0.38
CCHCR1-212ENST00000475684 DOCK3Q8IZD9 2030 aa12.7□□□□□ -0.38
CCHCR1-212ENST00000475684 PLXNB2O15031 1838 aa12.69□□□□□ -0.38
CCHCR1-212ENST00000475684 ZNF853P0CG23 659 aa12.69□□□□□ -0.38
CCHCR1-212ENST00000475684 CCL14Q16627 93 aa12.69□□□□□ -0.38
CCHCR1-212ENST00000475684 CAVIN4Q5BKX8 364 aa12.69□□□□□ -0.38
CCHCR1-212ENST00000475684 AKNAD1Q5T1N1 836 aa12.69□□□□□ -0.38
CCHCR1-212ENST00000475684 LMBR1LQ6UX01 489 aa12.69□□□□□ -0.38
CCHCR1-212ENST00000475684 CCDC84Q86UT8 332 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms