RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 TM4SF4P48230 202 aa8.45□□□□□ -1.06
SHQ1-207ENST00000475558 FBXO46Q6PJ61 603 aaPredicted RBP8.45□□□□□ -1.06
SHQ1-207ENST00000475558 PODNQ7Z5L7 613 aa8.45□□□□□ -1.06
SHQ1-207ENST00000475558 ZGPATQ8N5A5 531 aaKnown RBP8.45□□□□□ -1.06
SHQ1-207ENST00000475558 DDRGK1Q96HY6 314 aa8.45□□□□□ -1.06
SHQ1-207ENST00000475558 GMLQ99445 158 aa8.45□□□□□ -1.06
SHQ1-207ENST00000475558 DBNDD2Q9BQY9 259 aa8.45□□□□□ -1.06
SHQ1-207ENST00000475558 BCL11AQ9H165 835 aa8.45□□□□□ -1.06
SHQ1-207ENST00000475558 BOLA2Q9H3K6 86 aa8.45□□□□□ -1.06
SHQ1-207ENST00000475558 MYOZ2Q9NPC6 264 aa8.45□□□□□ -1.06
SHQ1-207ENST00000475558 DIAPH3Q9NSV4 1193 aa8.45□□□□□ -1.06
SHQ1-207ENST00000475558 DENND2AQ9ULE3 1009 aa8.45□□□□□ -1.06
SHQ1-207ENST00000475558 XDHP47989 1333 aa8.45□□□□□ -1.06
SHQ1-207ENST00000475558 PDS5AQ29RF7 1337 aaKnown RBP8.45□□□□□ -1.06
SHQ1-207ENST00000475558 RFX7Q2KHR2 1363 aa8.45□□□□□ -1.06
SHQ1-207ENST00000475558 PAPPA2Q9BXP8 1791 aa8.45□□□□□ -1.06
SHQ1-207ENST00000475558 USP17L3A6NCW0 530 aa8.44□□□□□ -1.06
SHQ1-207ENST00000475558 USP17L4A6NCW7 530 aa8.44□□□□□ -1.06
SHQ1-207ENST00000475558 UBE2Q2LH0YL09 131 aa8.44□□□□□ -1.06
SHQ1-207ENST00000475558 GPR25O00155 361 aa8.44□□□□□ -1.06
SHQ1-207ENST00000475558 GSPT1P15170 499 aaKnown RBP8.44□□□□□ -1.06
SHQ1-207ENST00000475558 CHMLP26374 656 aa8.44□□□□□ -1.06
SHQ1-207ENST00000475558 ARID4AP29374 1257 aaPredicted RBP8.44□□□□□ -1.06
SHQ1-207ENST00000475558 HIBADHP31937 336 aaKnown RBP8.44□□□□□ -1.06
SHQ1-207ENST00000475558 NF2P35240 595 aa8.44□□□□□ -1.06
SHQ1-207ENST00000475558 SREBF2Q12772 1141 aa8.44□□□□□ -1.06
SHQ1-207ENST00000475558 MAP3K12Q12852 859 aa8.44□□□□□ -1.06
SHQ1-207ENST00000475558 SPTY2D1Q68D10 685 aaPredicted RBP8.44□□□□□ -1.06
SHQ1-207ENST00000475558 TMEM92Q6UXU6 159 aa8.44□□□□□ -1.06
SHQ1-207ENST00000475558 TBC1D9Q6ZT07 1266 aa8.44□□□□□ -1.06
SHQ1-207ENST00000475558 USP17L1Q7RTZ2 530 aa8.44□□□□□ -1.06
SHQ1-207ENST00000475558 FBXO33Q7Z6M2 555 aa8.44□□□□□ -1.06
SHQ1-207ENST00000475558 KBTBD3Q8NAB2 608 aa8.44□□□□□ -1.06
SHQ1-207ENST00000475558 OTUD7AQ8TE49 926 aaPredicted RBP8.44□□□□□ -1.06
SHQ1-207ENST00000475558 TSHZ2Q9NRE2 1034 aa8.44□□□□□ -1.06
SHQ1-207ENST00000475558 HELLSQ9NRZ9 838 aa8.44□□□□□ -1.06
SHQ1-207ENST00000475558 PAG1Q9NWQ8 432 aa8.44□□□□□ -1.06
SHQ1-207ENST00000475558 RBM19Q9Y4C8 960 aaKnown RBP8.44□□□□□ -1.06
SHQ1-207ENST00000475558 ZNF804BA4D1E1 1349 aa8.44□□□□□ -1.06
SHQ1-207ENST00000475558 RAD50Q92878 1312 aa8.44□□□□□ -1.06
SHQ1-207ENST00000475558 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.43□□□□□ -1.06
SHQ1-207ENST00000475558 FKTNO75072 461 aa8.43□□□□□ -1.06
SHQ1-207ENST00000475558 MMP14P50281 582 aa8.43□□□□□ -1.06
SHQ1-207ENST00000475558 TTLL12Q14166 644 aaPredicted RBP8.43□□□□□ -1.06
SHQ1-207ENST00000475558 CCDC102BQ68D86 513 aa8.43□□□□□ -1.06
SHQ1-207ENST00000475558 MOB2Q70IA6 237 aa8.43□□□□□ -1.06
SHQ1-207ENST00000475558 ZNF804AQ7Z570 1209 aa8.43□□□□□ -1.06
SHQ1-207ENST00000475558 CERS3Q8IU89 383 aa8.43□□□□□ -1.06
SHQ1-207ENST00000475558 ZNF687Q8N1G0 1237 aa8.43□□□□□ -1.06
SHQ1-207ENST00000475558 OGFOD1Q8N543 542 aa8.43□□□□□ -1.06
SHQ1-207ENST00000475558 ZFP91Q96JP5 570 aaPredicted RBP8.43□□□□□ -1.06
SHQ1-207ENST00000475558 FSD1Q9BTV5 496 aa8.43□□□□□ -1.06
SHQ1-207ENST00000475558 CFHR5Q9BXR6 569 aa8.43□□□□□ -1.06
SHQ1-207ENST00000475558 C22orf23Q9BZE7 217 aa8.43□□□□□ -1.06
SHQ1-207ENST00000475558 PSME4Q14997 1843 aa8.43□□□□□ -1.06
SHQ1-207ENST00000475558 RNF113AO15541 343 aaKnown RBP8.42□□□□□ -1.06
SHQ1-207ENST00000475558 FRAT2O75474 233 aaPredicted RBP8.42□□□□□ -1.06
SHQ1-207ENST00000475558 TAF5LO75529 589 aa8.42□□□□□ -1.06
SHQ1-207ENST00000475558 ALDH1A1P00352 501 aa8.42□□□□□ -1.06
SHQ1-207ENST00000475558 PRKCSHP14314 528 aaPredicted RBP8.42□□□□□ -1.06
SHQ1-207ENST00000475558 RBM25P49756 843 aaKnown RBP8.42□□□□□ -1.06
SHQ1-207ENST00000475558 ANAPC15P60006 121 aa8.42□□□□□ -1.06
SHQ1-207ENST00000475558 UBE3CQ15386 1083 aa8.42□□□□□ -1.06
SHQ1-207ENST00000475558 MCMDC2Q4G0Z9 681 aa8.42□□□□□ -1.06
SHQ1-207ENST00000475558 RNF20Q5VTR2 975 aa8.42□□□□□ -1.06
SHQ1-207ENST00000475558 ARMC9Q7Z3E5 817 aa8.42□□□□□ -1.06
SHQ1-207ENST00000475558 SLF2Q8IX21 1173 aa8.42□□□□□ -1.06
SHQ1-207ENST00000475558 SPATA5Q8NB90 893 aa8.42□□□□□ -1.06
SHQ1-207ENST00000475558 WDR66Q8TBY9 1149 aa8.42□□□□□ -1.06
SHQ1-207ENST00000475558 FAM84BQ96KN1 310 aaPredicted RBP8.42□□□□□ -1.06
SHQ1-207ENST00000475558 ESYT1Q9BSJ8 1104 aa8.42□□□□□ -1.06
SHQ1-207ENST00000475558 USP26Q9BXU7 913 aa8.42□□□□□ -1.06
SHQ1-207ENST00000475558 SUGT1Q9Y2Z0 365 aa8.42□□□□□ -1.06
SHQ1-207ENST00000475558 COL4A1P02462 1669 aa8.41□□□□□ -1.06
SHQ1-207ENST00000475558 MYO3BQ8WXR4 1341 aa8.41□□□□□ -1.06
SHQ1-207ENST00000475558 SGSM2O43147 1006 aa8.41□□□□□ -1.06
SHQ1-207ENST00000475558 LDHCP07864 332 aa8.41□□□□□ -1.06
SHQ1-207ENST00000475558 INHBEP58166 350 aa8.41□□□□□ -1.06
SHQ1-207ENST00000475558 BECN1Q14457 450 aa8.41□□□□□ -1.06
SHQ1-207ENST00000475558 NBPF9Q3BBW0 867 aa8.41□□□□□ -1.06
SHQ1-207ENST00000475558 STRIP1Q5VSL9 837 aa8.41□□□□□ -1.06
SHQ1-207ENST00000475558 PRAMEF18Q5VWM3 479 aa8.41□□□□□ -1.06
SHQ1-207ENST00000475558 GPR153Q6NV75 609 aa8.41□□□□□ -1.06
SHQ1-207ENST00000475558 SKAP1Q86WV1 359 aa8.41□□□□□ -1.06
SHQ1-207ENST00000475558 HELBQ8NG08 1087 aaPredicted RBP8.41□□□□□ -1.06
SHQ1-207ENST00000475558 TBC1D22AQ8WUA7 517 aa8.41□□□□□ -1.06
SHQ1-207ENST00000475558 DNAJC2Q99543 621 aaKnown RBP8.41□□□□□ -1.06
SHQ1-207ENST00000475558 COA1Q9GZY4 146 aa8.41□□□□□ -1.06
SHQ1-207ENST00000475558 SNRKQ9NRH2 765 aa8.41□□□□□ -1.06
SHQ1-207ENST00000475558 CTNNA3Q9UI47 895 aa8.41□□□□□ -1.06
SHQ1-207ENST00000475558 GOLIM4O00461 696 aa8.4□□□□□ -1.06
SHQ1-207ENST00000475558 WNT10BO00744 389 aa8.4□□□□□ -1.06
SHQ1-207ENST00000475558 ZKSCAN1P17029 563 aaPredicted RBP8.4□□□□□ -1.06
SHQ1-207ENST00000475558 GNAT2P19087 354 aa8.4□□□□□ -1.06
SHQ1-207ENST00000475558 NT5C2P49902 561 aa8.4□□□□□ -1.06
SHQ1-207ENST00000475558 GSTO1P78417 241 aa8.4□□□□□ -1.06
SHQ1-207ENST00000475558 SPRYD7Q5W111 196 aa8.4□□□□□ -1.06
SHQ1-207ENST00000475558 APOBEC3FQ8IUX4 373 aaKnown RBP8.4□□□□□ -1.06
SHQ1-207ENST00000475558 MS4A4AQ96JQ5 239 aa8.4□□□□□ -1.06
SHQ1-207ENST00000475558 TBC1D32Q96NH3 1257 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms