RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 COL1A1P02452 1464 aaPredicted RBP13.36□□□□□ -0.27
KCNIP3-206ENST00000475491 RPAP1Q9BWH6 1393 aaPredicted RBP13.36□□□□□ -0.27
KCNIP3-206ENST00000475491 PTMAP06454 111 aaKnown RBP13.36□□□□□ -0.27
KCNIP3-206ENST00000475491 TMX4Q9H1E5 349 aaPredicted RBP13.36□□□□□ -0.27
KCNIP3-206ENST00000475491 TBC1D16Q8TBP0 767 aa13.35□□□□□ -0.27
KCNIP3-206ENST00000475491 ANKRD2Q9GZV1 360 aa13.35□□□□□ -0.27
KCNIP3-206ENST00000475491 CD209Q9NNX6 404 aa13.35□□□□□ -0.27
KCNIP3-206ENST00000475491 STK32BQ9NY57 414 aa13.35□□□□□ -0.27
KCNIP3-206ENST00000475491 NLGN1Q8N2Q7 840 aa13.35□□□□□ -0.27
KCNIP3-206ENST00000475491 NSUN4Q96CB9 384 aaKnown RBP13.35□□□□□ -0.27
KCNIP3-206ENST00000475491 CTDNEP1O95476 244 aa13.35□□□□□ -0.27
KCNIP3-206ENST00000475491 FBXO33Q7Z6M2 555 aa13.35□□□□□ -0.27
KCNIP3-206ENST00000475491 GTF3C6Q969F1 213 aa13.35□□□□□ -0.27
KCNIP3-206ENST00000475491 TM6SF1Q9BZW5 370 aa13.35□□□□□ -0.27
KCNIP3-206ENST00000475491 XDHP47989 1333 aa13.34□□□□□ -0.27
KCNIP3-206ENST00000475491 PPARAQ07869 468 aa13.34□□□□□ -0.27
KCNIP3-206ENST00000475491 GNL2Q13823 731 aaKnown RBP13.34□□□□□ -0.27
KCNIP3-206ENST00000475491 BICD2Q8TD16 824 aa13.34□□□□□ -0.27
KCNIP3-206ENST00000475491 ORC3Q9UBD5 711 aaPredicted RBP13.34□□□□□ -0.27
KCNIP3-206ENST00000475491 CDC27P30260 824 aa13.34□□□□□ -0.27
KCNIP3-206ENST00000475491 ZSCAN31Q96LW9 406 aaPredicted RBP13.34□□□□□ -0.27
KCNIP3-206ENST00000475491 SLC26A6Q9BXS9 759 aa13.34□□□□□ -0.27
KCNIP3-206ENST00000475491 CCDC69A6NI79 296 aa13.34□□□□□ -0.27
KCNIP3-206ENST00000475491 SMAP1Q8IYB5 467 aaPredicted RBP13.34□□□□□ -0.27
KCNIP3-206ENST00000475491 UBAC1Q9BSL1 405 aa13.34□□□□□ -0.27
KCNIP3-206ENST00000475491 SLC15A2Q16348 729 aa13.33□□□□□ -0.28
KCNIP3-206ENST00000475491 AOC3Q16853 763 aa13.33□□□□□ -0.28
KCNIP3-206ENST00000475491 ZNF804AQ7Z570 1209 aa13.33□□□□□ -0.28
KCNIP3-206ENST00000475491 SH2B1Q9NRF2 756 aaPredicted RBP13.33□□□□□ -0.28
KCNIP3-206ENST00000475491 STX8Q9UNK0 236 aa13.33□□□□□ -0.28
KCNIP3-206ENST00000475491 N4BP2Q86UW6 1770 aaPredicted RBP13.33□□□□□ -0.28
KCNIP3-206ENST00000475491 METAP2P50579 478 aaKnown RBP eCLIP13.33□□□□□ -0.28
KCNIP3-206ENST00000475491 ANKRD1Q15327 319 aa13.33□□□□□ -0.28
KCNIP3-206ENST00000475491 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.33□□□□□ -0.28
KCNIP3-206ENST00000475491 ZNF830Q96NB3 372 aaPredicted RBP13.33□□□□□ -0.28
KCNIP3-206ENST00000475491 KCNJ14Q9UNX9 436 aa13.33□□□□□ -0.28
KCNIP3-206ENST00000475491 GOLGA8AA7E2F4 631 aa13.33□□□□□ -0.28
KCNIP3-206ENST00000475491 USP17L3A6NCW0 530 aa13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 USP17L4A6NCW7 530 aa13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 RAD17O75943 681 aa13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 EXOSC10Q01780 885 aaKnown RBP13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 R3HDM1Q15032 1099 aaKnown RBP13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 RBM26Q5T8P6 1007 aaKnown RBP13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 USP17L1Q7RTZ2 530 aa13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 ZSCAN29Q8IWY8 852 aaPredicted RBP13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 MB21D2Q8IYB1 491 aaPredicted RBP13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 NSUN7Q8NE18 718 aaKnown RBP13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 UIMC1Q96RL1 719 aa13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 VAT1LQ9HCJ6 419 aa13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 SLC12A7Q9Y666 1083 aa13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 SRGNP10124 158 aa13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 GUCY1A2P33402 732 aa13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 AKNAD1Q5T1N1 836 aa13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 AKT1S1Q96B36 256 aa13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 TTF2Q9UNY4 1162 aaKnown RBP13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 BRWD3Q6RI45 1802 aa13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 H0YIN7 160 aa13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 BTDP43251 543 aa13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 PLCD1P51178 756 aa13.32□□□□□ -0.28
KCNIP3-206ENST00000475491 TSPY2A6NKD2 308 aa13.31□□□□□ -0.28
KCNIP3-206ENST00000475491 GOLGA8HP0CJ92 632 aa13.31□□□□□ -0.28
KCNIP3-206ENST00000475491 SPATA32Q96LK8 384 aa13.31□□□□□ -0.28
KCNIP3-206ENST00000475491 MKNK2Q9HBH9 465 aa13.31□□□□□ -0.28
KCNIP3-206ENST00000475491 USP25Q9UHP3 1055 aa13.31□□□□□ -0.28
KCNIP3-206ENST00000475491 ERICH2A1L162 156 aa13.31□□□□□ -0.28
KCNIP3-206ENST00000475491 TTC6Q86TZ1 520 aa13.31□□□□□ -0.28
KCNIP3-206ENST00000475491 ZBTB12Q9Y330 459 aaPredicted RBP13.31□□□□□ -0.28
KCNIP3-206ENST00000475491 ADRA2BP18089 450 aa13.31□□□□□ -0.28
KCNIP3-206ENST00000475491 RIOK1Q9BRS2 568 aaKnown RBP13.31□□□□□ -0.28
KCNIP3-206ENST00000475491 NOL10Q9BSC4 688 aaKnown RBP13.31□□□□□ -0.28
KCNIP3-206ENST00000475491 ZNF277Q9NRM2 450 aaPredicted RBP13.31□□□□□ -0.28
KCNIP3-206ENST00000475491 ZBTB43O43298 467 aa13.3□□□□□ -0.28
KCNIP3-206ENST00000475491 PTMSP20962 102 aa13.3□□□□□ -0.28
KCNIP3-206ENST00000475491 WTAPQ15007 396 aa13.3□□□□□ -0.28
KCNIP3-206ENST00000475491 PPP4R3BQ5MIZ7 849 aa13.3□□□□□ -0.28
KCNIP3-206ENST00000475491 CTR9Q6PD62 1173 aa13.3□□□□□ -0.28
KCNIP3-206ENST00000475491 TEX11Q8IYF3 940 aa13.3□□□□□ -0.28
KCNIP3-206ENST00000475491 ANGEL1Q9UNK9 670 aaKnown RBP13.3□□□□□ -0.28
KCNIP3-206ENST00000475491 WNK3Q9BYP7 1800 aa13.3□□□□□ -0.28
KCNIP3-206ENST00000475491 MBD3O95983 291 aa13.3□□□□□ -0.28
KCNIP3-206ENST00000475491 LIG1P18858 919 aa13.3□□□□□ -0.28
KCNIP3-206ENST00000475491 MARCKSP29966 332 aaPredicted RBP13.3□□□□□ -0.28
KCNIP3-206ENST00000475491 SHROOM1Q2M3G4 852 aaPredicted RBP13.3□□□□□ -0.28
KCNIP3-206ENST00000475491 SPECC1Q5M775 1068 aa13.3□□□□□ -0.28
KCNIP3-206ENST00000475491 KCNB2Q92953 911 aa13.3□□□□□ -0.28
KCNIP3-206ENST00000475491 DCP1AQ9NPI6 582 aaPredicted RBP13.3□□□□□ -0.28
KCNIP3-206ENST00000475491 CRNKL1Q9BZJ0 848 aaKnown RBP13.29□□□□□ -0.28
KCNIP3-206ENST00000475491 ATP6V1DQ9Y5K8 247 aa13.29□□□□□ -0.28
KCNIP3-206ENST00000475491 C4BP0C0L5 1744 aa13.29□□□□□ -0.28
KCNIP3-206ENST00000475491 MYH3P11055 1940 aa13.29□□□□□ -0.28
KCNIP3-206ENST00000475491 MPHOSPH10O00566 681 aaKnown RBP13.29□□□□□ -0.28
KCNIP3-206ENST00000475491 KRT85P78386 507 aa13.29□□□□□ -0.28
KCNIP3-206ENST00000475491 SYNE3Q6ZMZ3 975 aa13.29□□□□□ -0.28
KCNIP3-206ENST00000475491 C8orf76Q96K31 380 aa13.29□□□□□ -0.28
KCNIP3-206ENST00000475491 TSPY26PQ9H489 355 aa13.29□□□□□ -0.28
KCNIP3-206ENST00000475491 HPS5Q9UPZ3 1129 aa13.29□□□□□ -0.28
KCNIP3-206ENST00000475491 TNKSO95271 1327 aa13.29□□□□□ -0.28
KCNIP3-206ENST00000475491 UQCRHLA0A096LP55 91 aa13.29□□□□□ -0.28
KCNIP3-206ENST00000475491 PLSCR1O15162 318 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms