RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 HDLBPQ00341 1268 aaKnown RBP8.53□□□□□ -1.04
LSAMP-204ENST00000475403 CAVIN4Q5BKX8 364 aa8.53□□□□□ -1.04
LSAMP-204ENST00000475403 FKBP1CQ5VVH2 108 aa8.53□□□□□ -1.04
LSAMP-204ENST00000475403 ZDHHC15Q96MV8 337 aa8.53□□□□□ -1.04
LSAMP-204ENST00000475403 PRKAG2Q9UGJ0 569 aa8.53□□□□□ -1.04
LSAMP-204ENST00000475403 PNMA3Q9UL41 463 aa8.53□□□□□ -1.04
LSAMP-204ENST00000475403 IQSEC3Q9UPP2 1182 aaPredicted RBP8.53□□□□□ -1.04
LSAMP-204ENST00000475403 A0A0G2JLL6 359 aaPredicted RBP8.52□□□□□ -1.05
LSAMP-204ENST00000475403 POTEB2H3BUK9 544 aa8.52□□□□□ -1.05
LSAMP-204ENST00000475403 TCP10Q12799 353 aa8.52□□□□□ -1.05
LSAMP-204ENST00000475403 FKBP5Q13451 457 aaPredicted RBP8.52□□□□□ -1.05
LSAMP-204ENST00000475403 MOGSQ13724 837 aa8.52□□□□□ -1.05
LSAMP-204ENST00000475403 UBE4AQ14139 1066 aa8.52□□□□□ -1.05
LSAMP-204ENST00000475403 NOL9Q5SY16 702 aaKnown RBP8.52□□□□□ -1.05
LSAMP-204ENST00000475403 GPAT2Q6NUI2 795 aa8.52□□□□□ -1.05
LSAMP-204ENST00000475403 PRRT2Q7Z6L0 340 aaPredicted RBP8.52□□□□□ -1.05
LSAMP-204ENST00000475403 C8orf58Q8NAV2 365 aa8.52□□□□□ -1.05
LSAMP-204ENST00000475403 CDX2Q99626 313 aaPredicted RBP8.52□□□□□ -1.05
LSAMP-204ENST00000475403 SLC45A1Q9Y2W3 748 aa8.52□□□□□ -1.05
LSAMP-204ENST00000475403 ZHX2Q9Y6X8 837 aa8.52□□□□□ -1.05
LSAMP-204ENST00000475403 PRUNE2Q8WUY3 3088 aa8.52□□□□□ -1.05
LSAMP-204ENST00000475403 LAMA2P24043 3122 aaKnown RBP8.51□□□□□ -1.05
LSAMP-204ENST00000475403 TRIM75PA6NK02 468 aa8.51□□□□□ -1.05
LSAMP-204ENST00000475403 TNFRSF10AO00220 468 aa8.51□□□□□ -1.05
LSAMP-204ENST00000475403 PLA2G5P39877 138 aa8.51□□□□□ -1.05
LSAMP-204ENST00000475403 HNRNPUQ00839 825 aaKnown RBP eCLIP8.51□□□□□ -1.05
LSAMP-204ENST00000475403 FAM110CQ1W6H9 321 aa8.51□□□□□ -1.05
LSAMP-204ENST00000475403 FAM151AQ8WW52 585 aa8.51□□□□□ -1.05
LSAMP-204ENST00000475403 ZNF594Q96JF6 807 aaPredicted RBP8.51□□□□□ -1.05
LSAMP-204ENST00000475403 PFASO15067 1338 aa8.51□□□□□ -1.05
LSAMP-204ENST00000475403 ZNF853P0CG23 659 aa8.5□□□□□ -1.05
LSAMP-204ENST00000475403 PRKAR2AP13861 404 aaKnown RBP8.5□□□□□ -1.05
LSAMP-204ENST00000475403 CASP7P55210 303 aa8.5□□□□□ -1.05
LSAMP-204ENST00000475403 RALBP1Q15311 655 aa8.5□□□□□ -1.05
LSAMP-204ENST00000475403 GRIK5Q16478 980 aa8.5□□□□□ -1.05
LSAMP-204ENST00000475403 TJAP1Q5JTD0 557 aa8.5□□□□□ -1.05
LSAMP-204ENST00000475403 APOBEC3HQ6NTF7 200 aaKnown RBP8.5□□□□□ -1.05
LSAMP-204ENST00000475403 LMBR1LQ6UX01 489 aa8.5□□□□□ -1.05
LSAMP-204ENST00000475403 DOCK3Q8IZD9 2030 aa8.5□□□□□ -1.05
LSAMP-204ENST00000475403 SCYL3Q8IZE3 742 aa8.5□□□□□ -1.05
LSAMP-204ENST00000475403 LINS1Q8NG48 757 aa8.5□□□□□ -1.05
LSAMP-204ENST00000475403 DNAAF4Q8WXU2 420 aa8.5□□□□□ -1.05
LSAMP-204ENST00000475403 MYLIPQ8WY64 445 aa8.5□□□□□ -1.05
LSAMP-204ENST00000475403 FAM84BQ96KN1 310 aaPredicted RBP8.5□□□□□ -1.05
LSAMP-204ENST00000475403 RAPGEFL1Q9UHV5 662 aa8.5□□□□□ -1.05
LSAMP-204ENST00000475403 ZNF112Q9UJU3 913 aa8.5□□□□□ -1.05
LSAMP-204ENST00000475403 OGDHLQ9ULD0 1010 aa8.5□□□□□ -1.05
LSAMP-204ENST00000475403 AGTPBP1Q9UPW5 1226 aa8.5□□□□□ -1.05
LSAMP-204ENST00000475403 LRRFIP2Q9Y608 721 aaKnown RBP8.5□□□□□ -1.05
LSAMP-204ENST00000475403 COL2A1P02458 1487 aaPredicted RBP8.5□□□□□ -1.05
LSAMP-204ENST00000475403 SLC4A2P04920 1241 aa8.49□□□□□ -1.05
LSAMP-204ENST00000475403 PTPRAP18433 802 aa8.49□□□□□ -1.05
LSAMP-204ENST00000475403 FOXO4P98177 505 aa8.49□□□□□ -1.05
LSAMP-204ENST00000475403 FLIIQ13045 1269 aa8.49□□□□□ -1.05
LSAMP-204ENST00000475403 TRIM32Q13049 653 aa8.49□□□□□ -1.05
LSAMP-204ENST00000475403 LRRC26Q2I0M4 334 aa8.49□□□□□ -1.05
LSAMP-204ENST00000475403 HHIPL2Q6UWX4 724 aa8.49□□□□□ -1.05
LSAMP-204ENST00000475403 ZSCAN29Q8IWY8 852 aaPredicted RBP8.49□□□□□ -1.05
LSAMP-204ENST00000475403 TSPYL6Q8N831 410 aa8.49□□□□□ -1.05
LSAMP-204ENST00000475403 SUGT1Q9Y2Z0 365 aa8.49□□□□□ -1.05
LSAMP-204ENST00000475403 MUC3AQ02505 3323 aa8.49□□□□□ -1.05
LSAMP-204ENST00000475403 TTC28Q96AY4 2481 aa8.49□□□□□ -1.05
LSAMP-204ENST00000475403 DOCK2Q92608 1830 aa8.49□□□□□ -1.05
LSAMP-204ENST00000475403 MROH5Q6ZUA9 1318 aa8.49□□□□□ -1.05
LSAMP-204ENST00000475403 CDH23Q9H251 3354 aa8.48□□□□□ -1.05
LSAMP-204ENST00000475403 ZKSCAN1P17029 563 aaPredicted RBP8.48□□□□□ -1.05
LSAMP-204ENST00000475403 CYP2B6P20813 491 aa8.48□□□□□ -1.05
LSAMP-204ENST00000475403 GCLCP48506 637 aaPredicted RBP8.48□□□□□ -1.05
LSAMP-204ENST00000475403 PABPC4Q13310 644 aaKnown RBP eCLIP8.48□□□□□ -1.05
LSAMP-204ENST00000475403 PDE3AQ14432 1141 aa8.48□□□□□ -1.05
LSAMP-204ENST00000475403 GSE1Q14687 1217 aa8.48□□□□□ -1.05
LSAMP-204ENST00000475403 METTL24Q5JXM2 366 aa8.48□□□□□ -1.05
LSAMP-204ENST00000475403 G2E3Q7L622 706 aa8.48□□□□□ -1.05
LSAMP-204ENST00000475403 CCAR1Q8IX12 1150 aaKnown RBP8.48□□□□□ -1.05
LSAMP-204ENST00000475403 TRIB2Q92519 343 aa8.48□□□□□ -1.05
LSAMP-204ENST00000475403 DDRGK1Q96HY6 314 aa8.48□□□□□ -1.05
LSAMP-204ENST00000475403 MRIQ9BWK5 157 aa8.48□□□□□ -1.05
LSAMP-204ENST00000475403 SEMA6BQ9H3T3 888 aa8.48□□□□□ -1.05
LSAMP-204ENST00000475403 AFG3L2Q9Y4W6 797 aa8.48□□□□□ -1.05
LSAMP-204ENST00000475403 PTPRFP10586 1907 aa8.48□□□□□ -1.05
LSAMP-204ENST00000475403 MYH13Q9UKX3 1938 aa8.48□□□□□ -1.05
LSAMP-204ENST00000475403 DOCK1Q14185 1865 aa8.47□□□□□ -1.05
LSAMP-204ENST00000475403 MS4A1P11836 297 aa8.47□□□□□ -1.05
LSAMP-204ENST00000475403 NFIAQ12857 509 aa8.47□□□□□ -1.05
LSAMP-204ENST00000475403 TWISTNBQ3B726 338 aaPredicted RBP8.47□□□□□ -1.05
LSAMP-204ENST00000475403 TREML2Q5T2D2 321 aa8.47□□□□□ -1.05
LSAMP-204ENST00000475403 CDC42EP5Q6NZY7 148 aa8.47□□□□□ -1.05
LSAMP-204ENST00000475403 TRMT44Q8IYL2 757 aaKnown RBP8.47□□□□□ -1.05
LSAMP-204ENST00000475403 SOCS4Q8WXH5 440 aa8.47□□□□□ -1.05
LSAMP-204ENST00000475403 SENP6Q9GZR1 1112 aaPredicted RBP8.47□□□□□ -1.05
LSAMP-204ENST00000475403 CWC22Q9HCG8 908 aaKnown RBP8.47□□□□□ -1.05
LSAMP-204ENST00000475403 RTN4Q9NQC3 1192 aaKnown RBP8.47□□□□□ -1.05
LSAMP-204ENST00000475403 PRDM5Q9NQX1 630 aaPredicted RBP8.47□□□□□ -1.05
LSAMP-204ENST00000475403 C9orf78Q9NZ63 289 aaPredicted RBP8.47□□□□□ -1.05
LSAMP-204ENST00000475403 ADAMTS8Q9UP79 889 aa8.47□□□□□ -1.05
LSAMP-204ENST00000475403 MYBBP1AQ9BQG0 1328 aaKnown RBP8.47□□□□□ -1.05
LSAMP-204ENST00000475403 MAST2Q6P0Q8 1798 aa8.46□□□□□ -1.05
LSAMP-204ENST00000475403 APAF1O14727 1248 aa8.46□□□□□ -1.06
LSAMP-204ENST00000475403 COL6A1P12109 1028 aa8.46□□□□□ -1.06
LSAMP-204ENST00000475403 ATN1P54259 1190 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms