RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 PHF20L1A8MW92 1017 aa25.47■■□□□ 1.67
VPS36-203ENST00000475375 ADCY3O60266 1144 aa25.47■■□□□ 1.67
VPS36-203ENST00000475375 UBTFL1P0CB47 393 aaPredicted RBP25.47■■□□□ 1.67
VPS36-203ENST00000475375 PTPRAP18433 802 aa25.47■■□□□ 1.67
VPS36-203ENST00000475375 PHKA1P46020 1223 aa25.47■■□□□ 1.67
VPS36-203ENST00000475375 UBE2Q1Q7Z7E8 422 aa25.47■■□□□ 1.67
VPS36-203ENST00000475375 SMCR8Q8TEV9 937 aaPredicted RBP25.47■■□□□ 1.67
VPS36-203ENST00000475375 SEMA3EO15041 775 aa25.46■■□□□ 1.67
VPS36-203ENST00000475375 ENTPD3O75355 529 aa25.46■■□□□ 1.67
VPS36-203ENST00000475375 CIAO1O76071 339 aa25.46■■□□□ 1.67
VPS36-203ENST00000475375 DZIP1Q86YF9 867 aaKnown RBP25.46■■□□□ 1.67
VPS36-203ENST00000475375 TAOK2Q9UL54 1235 aa25.46■■□□□ 1.67
VPS36-203ENST00000475375 TNPO2O14787 897 aaKnown RBP25.45■■□□□ 1.66
VPS36-203ENST00000475375 ELNP15502 786 aa25.45■■□□□ 1.66
VPS36-203ENST00000475375 FLT3LGP49771 235 aa25.45■■□□□ 1.66
VPS36-203ENST00000475375 ZGPATQ8N5A5 531 aaKnown RBP25.45■■□□□ 1.66
VPS36-203ENST00000475375 IDI2Q9BXS1 227 aa25.45■■□□□ 1.66
VPS36-203ENST00000475375 FBXO3Q9UK99 471 aa25.45■■□□□ 1.66
VPS36-203ENST00000475375 AFG3L2Q9Y4W6 797 aa25.45■■□□□ 1.66
VPS36-203ENST00000475375 ATRNL1Q5VV63 1379 aa25.44■■□□□ 1.66
VPS36-203ENST00000475375 TRIM75PA6NK02 468 aa25.44■■□□□ 1.66
VPS36-203ENST00000475375 E9PSI1 815 aa25.44■■□□□ 1.66
VPS36-203ENST00000475375 SGPL1O95470 568 aa25.44■■□□□ 1.66
VPS36-203ENST00000475375 TFRCP02786 760 aaKnown RBP25.44■■□□□ 1.66
VPS36-203ENST00000475375 SMC4Q9NTJ3 1288 aa25.44■■□□□ 1.66
VPS36-203ENST00000475375 ABCF2Q9UG63 623 aa25.44■■□□□ 1.66
VPS36-203ENST00000475375 DOCK2Q92608 1830 aa25.43■■□□□ 1.66
VPS36-203ENST00000475375 INHAP05111 366 aa25.43■■□□□ 1.66
VPS36-203ENST00000475375 PICALMQ13492 652 aa25.43■■□□□ 1.66
VPS36-203ENST00000475375 SLF2Q8IX21 1173 aa25.43■■□□□ 1.66
VPS36-203ENST00000475375 SLC45A1Q9Y2W3 748 aa25.43■■□□□ 1.66
VPS36-203ENST00000475375 ZBTB7BO15156 539 aaPredicted RBP25.42■■□□□ 1.66
VPS36-203ENST00000475375 EVI5O60447 810 aa25.42■■□□□ 1.66
VPS36-203ENST00000475375 ADORA1P30542 326 aa25.42■■□□□ 1.66
VPS36-203ENST00000475375 IL15P40933 162 aaPredicted RBP25.42■■□□□ 1.66
VPS36-203ENST00000475375 CCDC102BQ68D86 513 aa25.42■■□□□ 1.66
VPS36-203ENST00000475375 SH3BP5LQ7L8J4 393 aa25.42■■□□□ 1.66
VPS36-203ENST00000475375 DEFB118Q96PH6 123 aa25.42■■□□□ 1.66
VPS36-203ENST00000475375 PA2G4Q9UQ80 394 aaKnown RBP25.42■■□□□ 1.66
VPS36-203ENST00000475375 MGAMO43451 1857 aa25.42■■□□□ 1.66
VPS36-203ENST00000475375 GAKO14976 1311 aa25.41■■□□□ 1.66
VPS36-203ENST00000475375 DDTLA6NHG4 134 aaPredicted RBP25.41■■□□□ 1.66
VPS36-203ENST00000475375 CTNND1O60716 968 aaKnown RBP25.41■■□□□ 1.66
VPS36-203ENST00000475375 SLURP2P0DP57 97 aa25.41■■□□□ 1.66
VPS36-203ENST00000475375 BTDP43251 543 aa25.4■■□□□ 1.66
VPS36-203ENST00000475375 COA7Q96BR5 231 aa25.4■■□□□ 1.66
VPS36-203ENST00000475375 DDX4Q9NQI0 724 aaKnown RBP25.4■■□□□ 1.66
VPS36-203ENST00000475375 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.4■■□□□ 1.66
VPS36-203ENST00000475375 MYH2Q9UKX2 1941 aa25.39■■□□□ 1.66
VPS36-203ENST00000475375 RASGRF1Q13972 1273 aa25.39■■□□□ 1.66
VPS36-203ENST00000475375 ALDH1L2Q3SY69 923 aa25.39■■□□□ 1.66
VPS36-203ENST00000475375 SPTY2D1Q68D10 685 aaPredicted RBP25.39■■□□□ 1.66
VPS36-203ENST00000475375 CCDC84Q86UT8 332 aaPredicted RBP25.39■■□□□ 1.66
VPS36-203ENST00000475375 ANKRD13CQ8N6S4 541 aa25.39■■□□□ 1.66
VPS36-203ENST00000475375 PXYLP1Q8TE99 480 aa25.39■■□□□ 1.66
VPS36-203ENST00000475375 IRF5Q13568 498 aa25.38■■□□□ 1.65
VPS36-203ENST00000475375 PRO3102Q9H379 93 aa25.38■■□□□ 1.65
VPS36-203ENST00000475375 AGTPBP1Q9UPW5 1226 aa25.38■■□□□ 1.65
VPS36-203ENST00000475375 HDAC5Q9UQL6 1122 aa25.38■■□□□ 1.65
VPS36-203ENST00000475375 RFX7Q2KHR2 1363 aa25.38■■□□□ 1.65
VPS36-203ENST00000475375 MAP3K10Q02779 954 aa25.37■■□□□ 1.65
VPS36-203ENST00000475375 PNMA3Q9UL41 463 aa25.37■■□□□ 1.65
VPS36-203ENST00000475375 TIMM10P62072 90 aa25.36■■□□□ 1.65
VPS36-203ENST00000475375 DOCK1Q14185 1865 aa25.36■■□□□ 1.65
VPS36-203ENST00000475375 MROH7-TTC4A0A0A0MT08 1334 aa25.36■■□□□ 1.65
VPS36-203ENST00000475375 CAPN2P17655 700 aa25.35■■□□□ 1.65
VPS36-203ENST00000475375 SLFN5Q08AF3 891 aa25.35■■□□□ 1.65
VPS36-203ENST00000475375 TREML2Q5T2D2 321 aa25.35■■□□□ 1.65
VPS36-203ENST00000475375 ERICH6Q7L0X2 663 aa25.35■■□□□ 1.65
VPS36-203ENST00000475375 FAM163AQ96GL9 167 aaPredicted RBP25.35■■□□□ 1.65
VPS36-203ENST00000475375 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.35■■□□□ 1.65
VPS36-203ENST00000475375 ZNF316A6NFI3 1004 aaPredicted RBP25.34■■□□□ 1.65
VPS36-203ENST00000475375 FAM196BA6NMK8 535 aa25.34■■□□□ 1.65
VPS36-203ENST00000475375 COPRSQ9NQ92 184 aa25.34■■□□□ 1.65
VPS36-203ENST00000475375 PAK6Q9NQU5 681 aaPredicted RBP25.34■■□□□ 1.65
VPS36-203ENST00000475375 MECOMQ03112 1051 aa25.33■■□□□ 1.65
VPS36-203ENST00000475375 FAM110CQ1W6H9 321 aa25.33■■□□□ 1.65
VPS36-203ENST00000475375 PAWRQ96IZ0 340 aaKnown RBP25.33■■□□□ 1.65
VPS36-203ENST00000475375 STAP2Q9UGK3 403 aa25.33■■□□□ 1.65
VPS36-203ENST00000475375 NOB1Q9ULX3 412 aaKnown RBP25.33■■□□□ 1.65
VPS36-203ENST00000475375 PDS5AQ29RF7 1337 aaKnown RBP25.33■■□□□ 1.64
VPS36-203ENST00000475375 PTPRFP10586 1907 aa25.32■■□□□ 1.64
VPS36-203ENST00000475375 A0A1B0GUL7 405 aa25.32■■□□□ 1.64
VPS36-203ENST00000475375 A0A1W2PPC1 479 aa25.32■■□□□ 1.64
VPS36-203ENST00000475375 SPP2Q13103 211 aa25.32■■□□□ 1.64
VPS36-203ENST00000475375 MVPQ14764 893 aaKnown RBP25.32■■□□□ 1.64
VPS36-203ENST00000475375 XAGE2Q96GT9 111 aa25.32■■□□□ 1.64
VPS36-203ENST00000475375 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.32■■□□□ 1.64
VPS36-203ENST00000475375 AKAP2Q9Y2D5 859 aa25.32■■□□□ 1.64
VPS36-203ENST00000475375 LAMA3Q16787 3333 aa25.31■■□□□ 1.64
VPS36-203ENST00000475375 GPR75-ASB3A0A0A6YYF3 556 aa25.31■■□□□ 1.64
VPS36-203ENST00000475375 ZBTB22O15209 634 aa25.31■■□□□ 1.64
VPS36-203ENST00000475375 TBC1D12O60347 775 aa25.31■■□□□ 1.64
VPS36-203ENST00000475375 NECAB2Q7Z6G3 386 aa25.31■■□□□ 1.64
VPS36-203ENST00000475375 PROCA1Q8NCQ7 364 aaPredicted RBP25.31■■□□□ 1.64
VPS36-203ENST00000475375 SLC17A8Q8NDX2 589 aa25.31■■□□□ 1.64
VPS36-203ENST00000475375 API5Q9BZZ5 524 aaKnown RBP25.31■■□□□ 1.64
VPS36-203ENST00000475375 CRISPLD2Q9H0B8 497 aa25.31■■□□□ 1.64
VPS36-203ENST00000475375 RHBDL3P58872 404 aa25.3■■□□□ 1.64
VPS36-203ENST00000475375 TFCP2Q12800 502 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms