RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 NFIAQ12857 509 aa15.72■□□□□ 0.11
SKA3-206ENST00000475251 DIXDC1Q155Q3 683 aa15.72■□□□□ 0.11
SKA3-206ENST00000475251 GPAT2Q6NUI2 795 aa15.72■□□□□ 0.11
SKA3-206ENST00000475251 PRRT2Q7Z6L0 340 aaPredicted RBP15.72■□□□□ 0.11
SKA3-206ENST00000475251 PXYLP1Q8TE99 480 aa15.72■□□□□ 0.11
SKA3-206ENST00000475251 FAM198AQ9UFP1 575 aa15.72■□□□□ 0.11
SKA3-206ENST00000475251 DENND2AQ9ULE3 1009 aa15.72■□□□□ 0.11
SKA3-206ENST00000475251 ZHX2Q9Y6X8 837 aa15.72■□□□□ 0.11
SKA3-206ENST00000475251 TRIOBPQ9H2D6 2365 aa15.71■□□□□ 0.11
SKA3-206ENST00000475251 TNPO2O14787 897 aaKnown RBP15.71■□□□□ 0.11
SKA3-206ENST00000475251 ZBTB7BO15156 539 aaPredicted RBP15.71■□□□□ 0.11
SKA3-206ENST00000475251 ADCY3O60266 1144 aa15.71■□□□□ 0.11
SKA3-206ENST00000475251 EVI5O60447 810 aa15.71■□□□□ 0.11
SKA3-206ENST00000475251 ENTPD3O75355 529 aa15.71■□□□□ 0.11
SKA3-206ENST00000475251 PRDX5P30044 214 aa15.71■□□□□ 0.11
SKA3-206ENST00000475251 IRF5Q13568 498 aa15.71■□□□□ 0.11
SKA3-206ENST00000475251 SLF2Q8IX21 1173 aa15.71■□□□□ 0.11
SKA3-206ENST00000475251 MRPL50Q8N5N7 158 aaKnown RBP15.71■□□□□ 0.11
SKA3-206ENST00000475251 SMCR8Q8TEV9 937 aaPredicted RBP15.71■□□□□ 0.11
SKA3-206ENST00000475251 USP44Q9H0E7 712 aa15.71■□□□□ 0.11
SKA3-206ENST00000475251 LRRFIP2Q9Y608 721 aaKnown RBP15.71■□□□□ 0.11
SKA3-206ENST00000475251 DOCK2Q92608 1830 aa15.71■□□□□ 0.1
SKA3-206ENST00000475251 CEP290O15078 2479 aa15.7■□□□□ 0.1
SKA3-206ENST00000475251 PTPRAP18433 802 aa15.7■□□□□ 0.1
SKA3-206ENST00000475251 IDI2Q9BXS1 227 aa15.7■□□□□ 0.1
SKA3-206ENST00000475251 UNC93B1Q9H1C4 597 aa15.7■□□□□ 0.1
SKA3-206ENST00000475251 PRO3102Q9H379 93 aa15.7■□□□□ 0.1
SKA3-206ENST00000475251 CEP126Q9P2H0 1117 aa15.7■□□□□ 0.1
SKA3-206ENST00000475251 PHF20L1A8MW92 1017 aa15.69■□□□□ 0.1
SKA3-206ENST00000475251 CIAO1O76071 339 aa15.69■□□□□ 0.1
SKA3-206ENST00000475251 TFRCP02786 760 aaKnown RBP15.69■□□□□ 0.1
SKA3-206ENST00000475251 INHAP05111 366 aa15.69■□□□□ 0.1
SKA3-206ENST00000475251 RFX5P48382 616 aaPredicted RBP15.69■□□□□ 0.1
SKA3-206ENST00000475251 FLT3LGP49771 235 aa15.69■□□□□ 0.1
SKA3-206ENST00000475251 ATP2B3Q16720 1220 aa15.69■□□□□ 0.1
SKA3-206ENST00000475251 GADL1Q6ZQY3 521 aa15.69■□□□□ 0.1
SKA3-206ENST00000475251 ZSCAN29Q8IWY8 852 aaPredicted RBP15.69■□□□□ 0.1
SKA3-206ENST00000475251 COA7Q96BR5 231 aa15.69■□□□□ 0.1
SKA3-206ENST00000475251 PNMA3Q9UL41 463 aa15.69■□□□□ 0.1
SKA3-206ENST00000475251 GABRQQ9UN88 632 aa15.69■□□□□ 0.1
SKA3-206ENST00000475251 HDAC5Q9UQL6 1122 aa15.69■□□□□ 0.1
SKA3-206ENST00000475251 AFG3L2Q9Y4W6 797 aa15.69■□□□□ 0.1
SKA3-206ENST00000475251 ATRNL1Q5VV63 1379 aa15.68■□□□□ 0.1
SKA3-206ENST00000475251 CTNND1O60716 968 aaKnown RBP15.68■□□□□ 0.1
SKA3-206ENST00000475251 RGS3P49796 1198 aa15.68■□□□□ 0.1
SKA3-206ENST00000475251 DZIP1Q86YF9 867 aaKnown RBP15.68■□□□□ 0.1
SKA3-206ENST00000475251 MAP3K10Q02779 954 aa15.67■□□□□ 0.1
SKA3-206ENST00000475251 ATG9AQ7Z3C6 839 aa15.67■□□□□ 0.1
SKA3-206ENST00000475251 DEFB118Q96PH6 123 aa15.67■□□□□ 0.1
SKA3-206ENST00000475251 PAK6Q9NQU5 681 aaPredicted RBP15.67■□□□□ 0.1
SKA3-206ENST00000475251 AGTPBP1Q9UPW5 1226 aa15.67■□□□□ 0.1
SKA3-206ENST00000475251 GAKO14976 1311 aa15.67■□□□□ 0.1
SKA3-206ENST00000475251 DOCK1Q14185 1865 aa15.66■□□□□ 0.1
SKA3-206ENST00000475251 ELNP15502 786 aa15.66■□□□□ 0.1
SKA3-206ENST00000475251 IL15P40933 162 aaPredicted RBP15.66■□□□□ 0.1
SKA3-206ENST00000475251 SPTY2D1Q68D10 685 aaPredicted RBP15.66■□□□□ 0.1
SKA3-206ENST00000475251 NECAB2Q7Z6G3 386 aa15.66■□□□□ 0.1
SKA3-206ENST00000475251 ZFPM1Q8IX07 1006 aa15.66■□□□□ 0.1
SKA3-206ENST00000475251 FAM9BQ8IZU0 186 aa15.66■□□□□ 0.1
SKA3-206ENST00000475251 SLC17A8Q8NDX2 589 aa15.66■□□□□ 0.1
SKA3-206ENST00000475251 SIL1Q9H173 461 aa15.66■□□□□ 0.1
SKA3-206ENST00000475251 PDS5AQ29RF7 1337 aaKnown RBP15.66■□□□□ 0.1
SKA3-206ENST00000475251 RFX7Q2KHR2 1363 aa15.65■□□□□ 0.1
SKA3-206ENST00000475251 MYH2Q9UKX2 1941 aa15.65■□□□□ 0.1
SKA3-206ENST00000475251 TRIM75PA6NK02 468 aa15.65■□□□□ 0.1
SKA3-206ENST00000475251 UBTFL1P0CB47 393 aaPredicted RBP15.65■□□□□ 0.1
SKA3-206ENST00000475251 PABPC4Q13310 644 aaKnown RBP eCLIP15.65■□□□□ 0.1
SKA3-206ENST00000475251 FAM110CQ1W6H9 321 aa15.65■□□□□ 0.1
SKA3-206ENST00000475251 ANKLE1Q8NAG6 615 aa15.65■□□□□ 0.1
SKA3-206ENST00000475251 FAM163AQ96GL9 167 aaPredicted RBP15.65■□□□□ 0.1
SKA3-206ENST00000475251 TBC1D2Q9BYX2 928 aa15.65■□□□□ 0.1
SKA3-206ENST00000475251 CRISPLD2Q9H0B8 497 aa15.65■□□□□ 0.1
SKA3-206ENST00000475251 TAOK2Q9UL54 1235 aa15.65■□□□□ 0.1
SKA3-206ENST00000475251 ZNF521Q96K83 1311 aa15.65■□□□□ 0.1
SKA3-206ENST00000475251 SZT2Q5T011 3432 aa15.64■□□□□ 0.09
SKA3-206ENST00000475251 PHKA1P46020 1223 aa15.64■□□□□ 0.09
SKA3-206ENST00000475251 ALDH1L2Q3SY69 923 aa15.64■□□□□ 0.09
SKA3-206ENST00000475251 ANKRD13CQ8N6S4 541 aa15.64■□□□□ 0.09
SKA3-206ENST00000475251 PROCA1Q8NCQ7 364 aaPredicted RBP15.64■□□□□ 0.09
SKA3-206ENST00000475251 SSH1Q8WYL5 1049 aa15.64■□□□□ 0.09
SKA3-206ENST00000475251 PTPRFP10586 1907 aa15.64■□□□□ 0.09
SKA3-206ENST00000475251 DDTLA6NHG4 134 aaPredicted RBP15.63■□□□□ 0.09
SKA3-206ENST00000475251 E9PSI1 815 aa15.63■□□□□ 0.09
SKA3-206ENST00000475251 DLL1O00548 723 aa15.63■□□□□ 0.09
SKA3-206ENST00000475251 TBC1D12O60347 775 aa15.63■□□□□ 0.09
SKA3-206ENST00000475251 MAP4K4O95819 1239 aaPredicted RBP15.63■□□□□ 0.09
SKA3-206ENST00000475251 BTDP43251 543 aa15.63■□□□□ 0.09
SKA3-206ENST00000475251 GCLCP48506 637 aaPredicted RBP15.63■□□□□ 0.09
SKA3-206ENST00000475251 PICALMQ13492 652 aa15.63■□□□□ 0.09
SKA3-206ENST00000475251 CCDC102BQ68D86 513 aa15.63■□□□□ 0.09
SKA3-206ENST00000475251 PAWRQ96IZ0 340 aaKnown RBP15.63■□□□□ 0.09
SKA3-206ENST00000475251 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.63■□□□□ 0.09
SKA3-206ENST00000475251 OSBPL5Q9H0X9 879 aaPredicted RBP15.63■□□□□ 0.09
SKA3-206ENST00000475251 ABCF2Q9UG63 623 aa15.63■□□□□ 0.09
SKA3-206ENST00000475251 HMGCRP04035 888 aa15.62■□□□□ 0.09
SKA3-206ENST00000475251 SH3BP5LQ7L8J4 393 aa15.62■□□□□ 0.09
SKA3-206ENST00000475251 MROH7-TTC4A0A0A0MT08 1334 aa15.62■□□□□ 0.09
SKA3-206ENST00000475251 PHIPQ8WWQ0 1821 aa15.61■□□□□ 0.09
SKA3-206ENST00000475251 RANBP2P49792 3224 aaKnown RBP15.61■□□□□ 0.09
SKA3-206ENST00000475251 BMP8BP34820 402 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms