RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 KIAA1211Q6ZU35 1233 aa6.48□□□□□ -1.37
SDHB-204ENST00000475049 AGGF1Q8N302 714 aaeCLIP6.48□□□□□ -1.37
SDHB-204ENST00000475049 FBXO27Q8NI29 283 aa6.48□□□□□ -1.37
SDHB-204ENST00000475049 WDR89Q96FK6 387 aaPredicted RBP6.48□□□□□ -1.37
SDHB-204ENST00000475049 NACC1Q96RE7 527 aa6.48□□□□□ -1.37
SDHB-204ENST00000475049 NT5C1AQ9BXI3 368 aa6.48□□□□□ -1.37
SDHB-204ENST00000475049 CYP4F12Q9HCS2 524 aa6.48□□□□□ -1.37
SDHB-204ENST00000475049 USP35Q9P2H5 1018 aa6.48□□□□□ -1.37
SDHB-204ENST00000475049 CSADQ9Y600 493 aa6.48□□□□□ -1.37
SDHB-204ENST00000475049 ROBO2Q9HCK4 1378 aa6.47□□□□□ -1.37
SDHB-204ENST00000475049 DCDC2CA8MYV0 355 aa6.47□□□□□ -1.37
SDHB-204ENST00000475049 CILPO75339 1184 aa6.47□□□□□ -1.37
SDHB-204ENST00000475049 GJA8P48165 433 aa6.47□□□□□ -1.37
SDHB-204ENST00000475049 MPP2Q14168 576 aa6.47□□□□□ -1.37
SDHB-204ENST00000475049 WIPI1Q5MNZ9 446 aaPredicted RBP6.47□□□□□ -1.37
SDHB-204ENST00000475049 HDXQ7Z353 690 aa6.47□□□□□ -1.37
SDHB-204ENST00000475049 C12orf50Q8NA57 414 aaPredicted RBP6.47□□□□□ -1.37
SDHB-204ENST00000475049 SPATA32Q96LK8 384 aa6.47□□□□□ -1.37
SDHB-204ENST00000475049 WDR18Q9BV38 432 aa6.47□□□□□ -1.37
SDHB-204ENST00000475049 TANGO6Q9C0B7 1094 aa6.47□□□□□ -1.37
SDHB-204ENST00000475049 KCNQ5Q9NR82 932 aa6.47□□□□□ -1.37
SDHB-204ENST00000475049 AP4E1Q9UPM8 1137 aa6.47□□□□□ -1.37
SDHB-204ENST00000475049 FAM221AA4D161 298 aa6.46□□□□□ -1.38
SDHB-204ENST00000475049 ALX3O95076 343 aa6.46□□□□□ -1.38
SDHB-204ENST00000475049 SELPP16109 830 aa6.46□□□□□ -1.38
SDHB-204ENST00000475049 CRKP46108 304 aa6.46□□□□□ -1.38
SDHB-204ENST00000475049 RPL6Q02878 288 aaKnown RBP6.46□□□□□ -1.38
SDHB-204ENST00000475049 SF3A1Q15459 793 aaKnown RBP6.46□□□□□ -1.38
SDHB-204ENST00000475049 KIF4BQ2VIQ3 1234 aa6.46□□□□□ -1.38
SDHB-204ENST00000475049 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.46□□□□□ -1.38
SDHB-204ENST00000475049 SLC43A3Q8NBI5 491 aa6.46□□□□□ -1.38
SDHB-204ENST00000475049 SREK1Q8WXA9 508 aaKnown RBP6.46□□□□□ -1.38
SDHB-204ENST00000475049 PLPPR2Q96GM1 343 aa6.46□□□□□ -1.38
SDHB-204ENST00000475049 TMPRSS13Q9BYE2 586 aa6.46□□□□□ -1.38
SDHB-204ENST00000475049 AKTIPQ9H8T0 292 aa6.46□□□□□ -1.38
SDHB-204ENST00000475049 EFR3BQ9Y2G0 817 aa6.46□□□□□ -1.38
SDHB-204ENST00000475049 PRAMEF27A3QJZ7 478 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 MEGF11A6BM72 1044 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 C9orf172C9J069 976 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 F8W735 103 aaPredicted RBP6.45□□□□□ -1.38
SDHB-204ENST00000475049 SART1O43290 800 aaKnown RBP6.45□□□□□ -1.38
SDHB-204ENST00000475049 GLB1P16278 677 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 NASPP49321 788 aaPredicted RBP6.45□□□□□ -1.38
SDHB-204ENST00000475049 CDK8P49336 464 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 NRG1Q02297 640 aaPredicted RBP6.45□□□□□ -1.38
SDHB-204ENST00000475049 ID3Q02535 119 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 INPP5AQ14642 412 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 XP32Q5T750 250 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 LRFN4Q6PJG9 635 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 DYMQ7RTS9 669 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 REC114Q7Z4M0 266 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 C12orf40Q86WS4 652 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 RASGRP4Q8TDF6 673 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 CPLX3Q8WVH0 158 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 LENG1Q96BZ8 264 aaPredicted RBP6.45□□□□□ -1.38
SDHB-204ENST00000475049 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.45□□□□□ -1.38
SDHB-204ENST00000475049 SEMA6BQ9H3T3 888 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 GINM1Q9NU53 330 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 CACNA2D2Q9NY47 1150 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 PRKAG2Q9UGJ0 569 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 SNCAIPQ9Y6H5 919 aa6.45□□□□□ -1.38
SDHB-204ENST00000475049 GRIN3BO60391 1043 aa6.44□□□□□ -1.38
SDHB-204ENST00000475049 DRD2P14416 443 aa6.44□□□□□ -1.38
SDHB-204ENST00000475049 ATF4P18848 351 aaPredicted RBP6.44□□□□□ -1.38
SDHB-204ENST00000475049 RSPO4Q2I0M5 234 aaPredicted RBP6.44□□□□□ -1.38
SDHB-204ENST00000475049 NKAPLQ5M9Q1 402 aa6.44□□□□□ -1.38
SDHB-204ENST00000475049 FBXW10Q5XX13 1052 aa6.44□□□□□ -1.38
SDHB-204ENST00000475049 ANKRD34AQ69YU3 496 aa6.44□□□□□ -1.38
SDHB-204ENST00000475049 TMEM130Q8N3G9 435 aa6.44□□□□□ -1.38
SDHB-204ENST00000475049 BRMS1Q9HCU9 246 aa6.44□□□□□ -1.38
SDHB-204ENST00000475049 TPSG1Q9NRR2 321 aa6.44□□□□□ -1.38
SDHB-204ENST00000475049 GAS2O43903 313 aaKnown RBP6.43□□□□□ -1.38
SDHB-204ENST00000475049 SSBP05455 408 aaKnown RBP eCLIP6.43□□□□□ -1.38
SDHB-204ENST00000475049 ADH5P11766 374 aa6.43□□□□□ -1.38
SDHB-204ENST00000475049 ATP2B1P20020 1258 aa6.43□□□□□ -1.38
SDHB-204ENST00000475049 IREB2P48200 963 aaKnown RBP6.43□□□□□ -1.38
SDHB-204ENST00000475049 ZNF165P49910 485 aa6.43□□□□□ -1.38
SDHB-204ENST00000475049 SOX4Q06945 474 aaPredicted RBP6.43□□□□□ -1.38
SDHB-204ENST00000475049 COL9A2Q14055 689 aaPredicted RBP6.43□□□□□ -1.38
SDHB-204ENST00000475049 ZC3H12AQ5D1E8 599 aaKnown RBP6.43□□□□□ -1.38
SDHB-204ENST00000475049 PPM1JQ5JR12 505 aa6.43□□□□□ -1.38
SDHB-204ENST00000475049 GK5Q6ZS86 529 aa6.43□□□□□ -1.38
SDHB-204ENST00000475049 SLITRK4Q8IW52 837 aa6.43□□□□□ -1.38
SDHB-204ENST00000475049 SMG8Q8ND04 991 aaKnown RBP6.43□□□□□ -1.38
SDHB-204ENST00000475049 WFDC12Q8WWY7 111 aa6.43□□□□□ -1.38
SDHB-204ENST00000475049 SEC16BQ96JE7 1060 aa6.43□□□□□ -1.38
SDHB-204ENST00000475049 DRC1Q96MC2 740 aa6.43□□□□□ -1.38
SDHB-204ENST00000475049 FERD3LQ96RJ6 166 aa6.43□□□□□ -1.38
SDHB-204ENST00000475049 LRRC3Q9BY71 257 aa6.43□□□□□ -1.38
SDHB-204ENST00000475049 CEP41Q9BYV8 373 aa6.43□□□□□ -1.38
SDHB-204ENST00000475049 SUGCTQ9HAC7 445 aa6.43□□□□□ -1.38
SDHB-204ENST00000475049 PIDD1Q9HB75 910 aa6.43□□□□□ -1.38
SDHB-204ENST00000475049 PPP1R9AQ9ULJ8 1098 aa6.43□□□□□ -1.38
SDHB-204ENST00000475049 TMPRSS2O15393 492 aa6.42□□□□□ -1.38
SDHB-204ENST00000475049 RNGTTO60942 597 aaKnown RBP6.42□□□□□ -1.38
SDHB-204ENST00000475049 ASPAP45381 313 aa6.42□□□□□ -1.38
SDHB-204ENST00000475049 ETF1P62495 437 aaKnown RBP6.42□□□□□ -1.38
SDHB-204ENST00000475049 ADGRE1Q14246 886 aa6.42□□□□□ -1.38
SDHB-204ENST00000475049 ATXN3LQ9H3M9 355 aa6.42□□□□□ -1.38
SDHB-204ENST00000475049 SSU72Q9NP77 194 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms