RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 IL25Q9H293 177 aa11.45□□□□□ -0.58
DDX39B-217ENST00000474961 HELLSQ9NRZ9 838 aa11.45□□□□□ -0.58
DDX39B-217ENST00000474961 RNF181Q9P0P0 153 aa11.45□□□□□ -0.58
DDX39B-217ENST00000474961 ADAMTSL1Q8N6G6 1762 aa11.44□□□□□ -0.58
DDX39B-217ENST00000474961 F8W031 263 aaPredicted RBP11.44□□□□□ -0.58
DDX39B-217ENST00000474961 M0R2C6 588 aa11.44□□□□□ -0.58
DDX39B-217ENST00000474961 SGSM2O43147 1006 aa11.44□□□□□ -0.58
DDX39B-217ENST00000474961 LDHCP07864 332 aa11.44□□□□□ -0.58
DDX39B-217ENST00000474961 GSTO1P78417 241 aa11.44□□□□□ -0.58
DDX39B-217ENST00000474961 TNIP1Q15025 636 aa11.44□□□□□ -0.58
DDX39B-217ENST00000474961 MCMDC2Q4G0Z9 681 aa11.44□□□□□ -0.58
DDX39B-217ENST00000474961 VARS2Q5ST30 1063 aaKnown RBP11.44□□□□□ -0.58
DDX39B-217ENST00000474961 C9orf131Q5VYM1 1079 aa11.44□□□□□ -0.58
DDX39B-217ENST00000474961 TMED8Q6PL24 325 aaPredicted RBP11.44□□□□□ -0.58
DDX39B-217ENST00000474961 GMLQ99445 158 aa11.44□□□□□ -0.58
DDX39B-217ENST00000474961 PUS7LQ9H0K6 701 aaKnown RBP11.44□□□□□ -0.58
DDX39B-217ENST00000474961 TTF2Q9UNY4 1162 aaKnown RBP11.44□□□□□ -0.58
DDX39B-217ENST00000474961 MAST3O60307 1309 aa11.43□□□□□ -0.58
DDX39B-217ENST00000474961 MYO3BQ8WXR4 1341 aa11.43□□□□□ -0.58
DDX39B-217ENST00000474961 RAD50Q92878 1312 aa11.43□□□□□ -0.58
DDX39B-217ENST00000474961 ZNF541Q9H0D2 1346 aa11.43□□□□□ -0.58
DDX39B-217ENST00000474961 CDK5RAP2Q96SN8 1893 aa11.43□□□□□ -0.58
DDX39B-217ENST00000474961 DIXDC1Q155Q3 683 aa11.43□□□□□ -0.58
DDX39B-217ENST00000474961 CCDC129Q6ZRS4 1044 aa11.43□□□□□ -0.58
DDX39B-217ENST00000474961 ADGRA1Q86SQ6 560 aa11.43□□□□□ -0.58
DDX39B-217ENST00000474961 ZNF589Q86UQ0 364 aaPredicted RBP11.43□□□□□ -0.58
DDX39B-217ENST00000474961 KIAA0825Q8IV33 1275 aa11.43□□□□□ -0.58
DDX39B-217ENST00000474961 SLF2Q8IX21 1173 aa11.43□□□□□ -0.58
DDX39B-217ENST00000474961 PCDH10Q9P2E7 1040 aa11.43□□□□□ -0.58
DDX39B-217ENST00000474961 ECM29Q5VYK3 1845 aa11.42□□□□□ -0.58
DDX39B-217ENST00000474961 MROH7-TTC4A0A0A0MT08 1334 aa11.42□□□□□ -0.58
DDX39B-217ENST00000474961 CCDC171Q6TFL3 1326 aa11.42□□□□□ -0.58
DDX39B-217ENST00000474961 MAGEB6P1A0A0J9YX57 407 aa11.42□□□□□ -0.58
DDX39B-217ENST00000474961 MBD4O95243 580 aa11.42□□□□□ -0.58
DDX39B-217ENST00000474961 SCNN1DP51172 638 aa11.42□□□□□ -0.58
DDX39B-217ENST00000474961 MFAP1P55081 439 aaKnown RBP11.42□□□□□ -0.58
DDX39B-217ENST00000474961 MIGA1Q8NAN2 632 aa11.42□□□□□ -0.58
DDX39B-217ENST00000474961 AGBL3Q8NEM8 1001 aa11.42□□□□□ -0.58
DDX39B-217ENST00000474961 GJA3Q9Y6H8 435 aa11.42□□□□□ -0.58
DDX39B-217ENST00000474961 GAKO14976 1311 aa11.41□□□□□ -0.58
DDX39B-217ENST00000474961 GPAA1O43292 621 aa11.41□□□□□ -0.58
DDX39B-217ENST00000474961 EIF5BO60841 1220 aaKnown RBP11.41□□□□□ -0.58
DDX39B-217ENST00000474961 DYNLL1P63167 89 aaKnown RBP11.41□□□□□ -0.58
DDX39B-217ENST00000474961 HDLBPQ00341 1268 aaKnown RBP11.41□□□□□ -0.58
DDX39B-217ENST00000474961 KIAA1211Q6ZU35 1233 aa11.41□□□□□ -0.58
DDX39B-217ENST00000474961 AIDAQ96BJ3 306 aa11.41□□□□□ -0.58
DDX39B-217ENST00000474961 STRBPQ96SI9 672 aaKnown RBP11.41□□□□□ -0.58
DDX39B-217ENST00000474961 MRIQ9BWK5 157 aa11.41□□□□□ -0.58
DDX39B-217ENST00000474961 ARMT1Q9H993 441 aa11.41□□□□□ -0.58
DDX39B-217ENST00000474961 ANO2Q9NQ90 1003 aa11.41□□□□□ -0.58
DDX39B-217ENST00000474961 DAGLAQ9Y4D2 1042 aa11.41□□□□□ -0.58
DDX39B-217ENST00000474961 BAZ2AQ9UIF9 1905 aaKnown RBP11.41□□□□□ -0.58
DDX39B-217ENST00000474961 FOCADQ5VW36 1801 aa11.4□□□□□ -0.58
DDX39B-217ENST00000474961 GPR75-ASB3A0A0A6YYF3 556 aa11.4□□□□□ -0.58
DDX39B-217ENST00000474961 REC8O95072 547 aa11.4□□□□□ -0.58
DDX39B-217ENST00000474961 USP17L8P0C7I0 530 aa11.4□□□□□ -0.58
DDX39B-217ENST00000474961 RPS12P25398 132 aaKnown RBP11.4□□□□□ -0.58
DDX39B-217ENST00000474961 BTDP43251 543 aa11.4□□□□□ -0.58
DDX39B-217ENST00000474961 CRKP46108 304 aa11.4□□□□□ -0.58
DDX39B-217ENST00000474961 GMPSP49915 693 aaPredicted RBP11.4□□□□□ -0.58
DDX39B-217ENST00000474961 PPP4CP60510 307 aa11.4□□□□□ -0.58
DDX39B-217ENST00000474961 PTH1RQ03431 593 aa11.4□□□□□ -0.58
DDX39B-217ENST00000474961 PPP4R3BQ5MIZ7 849 aa11.4□□□□□ -0.58
DDX39B-217ENST00000474961 HHIPL2Q6UWX4 724 aa11.4□□□□□ -0.58
DDX39B-217ENST00000474961 LCORLQ8N3X6 602 aa11.4□□□□□ -0.58
DDX39B-217ENST00000474961 KCNV2Q8TDN2 545 aa11.4□□□□□ -0.58
DDX39B-217ENST00000474961 TEKT1Q969V4 418 aa11.4□□□□□ -0.58
DDX39B-217ENST00000474961 RIOK1Q9BRS2 568 aaKnown RBP11.4□□□□□ -0.58
DDX39B-217ENST00000474961 NOL10Q9BSC4 688 aaKnown RBP11.4□□□□□ -0.58
DDX39B-217ENST00000474961 LSG1Q9H089 658 aaKnown RBP11.4□□□□□ -0.58
DDX39B-217ENST00000474961 AATFQ9NY61 560 aaKnown RBP eCLIP11.4□□□□□ -0.58
DDX39B-217ENST00000474961 SERPINA10Q9UK55 444 aa11.4□□□□□ -0.58
DDX39B-217ENST00000474961 HDAC9Q9UKV0 1011 aa11.4□□□□□ -0.58
DDX39B-217ENST00000474961 BAG3O95817 575 aa11.39□□□□□ -0.59
DDX39B-217ENST00000474961 RBM5P52756 815 aaKnown RBP eCLIP11.39□□□□□ -0.59
DDX39B-217ENST00000474961 CFAP100Q494V2 611 aa11.39□□□□□ -0.59
DDX39B-217ENST00000474961 VPS53Q5VIR6 699 aa11.39□□□□□ -0.59
DDX39B-217ENST00000474961 GPC2Q8N158 579 aa11.39□□□□□ -0.59
DDX39B-217ENST00000474961 OGFOD1Q8N543 542 aa11.39□□□□□ -0.59
DDX39B-217ENST00000474961 DPF2Q92785 391 aa11.39□□□□□ -0.59
DDX39B-217ENST00000474961 ZDHHC15Q96MV8 337 aa11.39□□□□□ -0.59
DDX39B-217ENST00000474961 USP26Q9BXU7 913 aa11.39□□□□□ -0.59
DDX39B-217ENST00000474961 GOLGB1Q14789 3259 aaKnown RBP11.39□□□□□ -0.59
DDX39B-217ENST00000474961 MYH1P12882 1939 aa11.39□□□□□ -0.59
DDX39B-217ENST00000474961 SHTN1A0MZ66 631 aa11.38□□□□□ -0.59
DDX39B-217ENST00000474961 PATL2C9JE40 543 aaKnown RBP11.38□□□□□ -0.59
DDX39B-217ENST00000474961 PRKAB2O43741 272 aa11.38□□□□□ -0.59
DDX39B-217ENST00000474961 DDNO94850 711 aaPredicted RBP11.38□□□□□ -0.59
DDX39B-217ENST00000474961 HSPD1P10809 573 aaKnown RBP11.38□□□□□ -0.59
DDX39B-217ENST00000474961 GNAT2P19087 354 aa11.38□□□□□ -0.59
DDX39B-217ENST00000474961 MMP14P50281 582 aa11.38□□□□□ -0.59
DDX39B-217ENST00000474961 ZNF280AP59817 542 aaPredicted RBP11.38□□□□□ -0.59
DDX39B-217ENST00000474961 APOBEC3HQ6NTF7 200 aaKnown RBP11.38□□□□□ -0.59
DDX39B-217ENST00000474961 CERS3Q8IU89 383 aa11.38□□□□□ -0.59
DDX39B-217ENST00000474961 CDAN1Q8IWY9 1227 aa11.38□□□□□ -0.59
DDX39B-217ENST00000474961 ZNF687Q8N1G0 1237 aa11.38□□□□□ -0.59
DDX39B-217ENST00000474961 ZNF454Q8N9F8 522 aa11.38□□□□□ -0.59
DDX39B-217ENST00000474961 SH3RF3Q8TEJ3 882 aaPredicted RBP11.38□□□□□ -0.59
DDX39B-217ENST00000474961 MAP4K1Q92918 833 aa11.38□□□□□ -0.59
DDX39B-217ENST00000474961 DSCC1Q9BVC3 393 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms