RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 ZFPM1Q8IX07 1006 aa11.99□□□□□ -0.49
COL8A1-206ENST00000474648 TEX11Q8IYF3 940 aa11.99□□□□□ -0.49
COL8A1-206ENST00000474648 IFNL3Q8IZI9 196 aa11.99□□□□□ -0.49
COL8A1-206ENST00000474648 TGFBRAP1Q8WUH2 860 aa11.99□□□□□ -0.49
COL8A1-206ENST00000474648 SDR42E1Q8WUS8 393 aa11.99□□□□□ -0.49
COL8A1-206ENST00000474648 SPOCK2Q92563 424 aa11.99□□□□□ -0.49
COL8A1-206ENST00000474648 DSCC1Q9BVC3 393 aa11.99□□□□□ -0.49
COL8A1-206ENST00000474648 IDI2Q9BXS1 227 aa11.99□□□□□ -0.49
COL8A1-206ENST00000474648 CRNKL1Q9BZJ0 848 aaKnown RBP11.99□□□□□ -0.49
COL8A1-206ENST00000474648 TAF1DQ9H5J8 278 aaPredicted RBP11.99□□□□□ -0.49
COL8A1-206ENST00000474648 EPB41L4AQ9HCS5 686 aaPredicted RBP11.99□□□□□ -0.49
COL8A1-206ENST00000474648 ANO2Q9NQ90 1003 aa11.99□□□□□ -0.49
COL8A1-206ENST00000474648 DDX4Q9NQI0 724 aaKnown RBP11.99□□□□□ -0.49
COL8A1-206ENST00000474648 FAM198AQ9UFP1 575 aa11.99□□□□□ -0.49
COL8A1-206ENST00000474648 HACL1Q9UJ83 578 aa11.99□□□□□ -0.49
COL8A1-206ENST00000474648 TIAM2Q8IVF5 1701 aa11.98□□□□□ -0.49
COL8A1-206ENST00000474648 RPAP1Q9BWH6 1393 aaPredicted RBP11.98□□□□□ -0.49
COL8A1-206ENST00000474648 CLRN2A0PK11 232 aa11.98□□□□□ -0.49
COL8A1-206ENST00000474648 FGAP02671 866 aa11.98□□□□□ -0.49
COL8A1-206ENST00000474648 EPHX2P34913 555 aa11.98□□□□□ -0.49
COL8A1-206ENST00000474648 GIMAP6Q6P9H5 292 aa11.98□□□□□ -0.49
COL8A1-206ENST00000474648 KIAA1211Q6ZU35 1233 aa11.98□□□□□ -0.49
COL8A1-206ENST00000474648 MAPKAPK5Q8IW41 473 aa11.98□□□□□ -0.49
COL8A1-206ENST00000474648 FAM212AQ96EL1 285 aa11.98□□□□□ -0.49
COL8A1-206ENST00000474648 RRAGCQ9HB90 399 aa11.98□□□□□ -0.49
COL8A1-206ENST00000474648 DCP1AQ9NPI6 582 aaPredicted RBP11.98□□□□□ -0.49
COL8A1-206ENST00000474648 ATP8A2Q9NTI2 1148 aa11.98□□□□□ -0.49
COL8A1-206ENST00000474648 IQCA1LA6NCM1 817 aa11.97□□□□□ -0.49
COL8A1-206ENST00000474648 EPB41L2O43491 1005 aaKnown RBP11.97□□□□□ -0.49
COL8A1-206ENST00000474648 REC8O95072 547 aa11.97□□□□□ -0.49
COL8A1-206ENST00000474648 USP5P45974 858 aa11.97□□□□□ -0.49
COL8A1-206ENST00000474648 NECTIN1Q15223 517 aa11.97□□□□□ -0.49
COL8A1-206ENST00000474648 FKBP1CQ5VVH2 108 aa11.97□□□□□ -0.49
COL8A1-206ENST00000474648 USP50Q70EL3 339 aaPredicted RBP11.97□□□□□ -0.49
COL8A1-206ENST00000474648 PGAP2Q9UHJ9 254 aa11.97□□□□□ -0.49
COL8A1-206ENST00000474648 FLT1P17948 1338 aa11.96□□□□□ -0.49
COL8A1-206ENST00000474648 SMIM22K7EJ46 135 aa11.96□□□□□ -0.49
COL8A1-206ENST00000474648 ENTPD3O75355 529 aa11.96□□□□□ -0.49
COL8A1-206ENST00000474648 APPP05067 770 aa11.96□□□□□ -0.49
COL8A1-206ENST00000474648 VEGFAP15692 232 aaPredicted RBP11.96□□□□□ -0.49
COL8A1-206ENST00000474648 SBK1Q52WX2 424 aa11.96□□□□□ -0.49
COL8A1-206ENST00000474648 CTR9Q6PD62 1173 aa11.96□□□□□ -0.49
COL8A1-206ENST00000474648 SH3BP5LQ7L8J4 393 aa11.96□□□□□ -0.49
COL8A1-206ENST00000474648 KCNB2Q92953 911 aa11.96□□□□□ -0.49
COL8A1-206ENST00000474648 RBM8AQ9Y5S9 174 aaKnown RBP11.96□□□□□ -0.49
COL8A1-206ENST00000474648 MAST2Q6P0Q8 1798 aa11.96□□□□□ -0.49
COL8A1-206ENST00000474648 CNTNAP1P78357 1384 aa11.95□□□□□ -0.5
COL8A1-206ENST00000474648 TCP10L2B9ZVM9 353 aa11.95□□□□□ -0.5
COL8A1-206ENST00000474648 USP17L12C9JPN9 530 aa11.95□□□□□ -0.5
COL8A1-206ENST00000474648 USP17L21D6R901 530 aa11.95□□□□□ -0.5
COL8A1-206ENST00000474648 MYO1BO43795 1136 aa11.95□□□□□ -0.5
COL8A1-206ENST00000474648 EIF5BO60841 1220 aaKnown RBP11.95□□□□□ -0.5
COL8A1-206ENST00000474648 CYP2D6P10635 497 aa11.95□□□□□ -0.5
COL8A1-206ENST00000474648 PICALMQ13492 652 aa11.95□□□□□ -0.5
COL8A1-206ENST00000474648 ANGEL2Q5VTE6 544 aaKnown RBP11.95□□□□□ -0.5
COL8A1-206ENST00000474648 ZC3H15Q8WU90 426 aaKnown RBP11.95□□□□□ -0.5
COL8A1-206ENST00000474648 FAM151AQ8WW52 585 aa11.95□□□□□ -0.5
COL8A1-206ENST00000474648 NACAP1Q9BZK3 213 aa11.95□□□□□ -0.5
COL8A1-206ENST00000474648 OSBPL5Q9H0X9 879 aaPredicted RBP11.95□□□□□ -0.5
COL8A1-206ENST00000474648 VEZTQ9HBM0 779 aa11.95□□□□□ -0.5
COL8A1-206ENST00000474648 NMRK2Q9NPI5 230 aa11.95□□□□□ -0.5
COL8A1-206ENST00000474648 SCAF8Q9UPN6 1271 aaKnown RBP11.95□□□□□ -0.5
COL8A1-206ENST00000474648 MYH2Q9UKX2 1941 aa11.95□□□□□ -0.5
COL8A1-206ENST00000474648 ADAMTSL1Q8N6G6 1762 aa11.95□□□□□ -0.5
COL8A1-206ENST00000474648 WDR90Q96KV7 1748 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 ZMYM6O95789 1325 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 CYP2D7A0A087X1C5 515 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 DDTLA6NHG4 134 aaPredicted RBP11.94□□□□□ -0.5
COL8A1-206ENST00000474648 HSPA4P34932 840 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 PLCD1P51178 756 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 TCP10Q12799 353 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 RASA3Q14644 834 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 C12orf60Q5U649 245 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 CREB3L3Q68CJ9 461 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 FAM83AQ86UY5 434 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 PNMA8AQ86V59 439 aaPredicted RBP11.94□□□□□ -0.5
COL8A1-206ENST00000474648 ZNF526Q8TF50 670 aaPredicted RBP11.94□□□□□ -0.5
COL8A1-206ENST00000474648 NAPBQ9H115 298 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 MCM9Q9NXL9 1143 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 GGA3Q9NZ52 723 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 TMOD2Q9NZR1 351 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 SAP30BPQ9UHR5 308 aaKnown RBP11.94□□□□□ -0.5
COL8A1-206ENST00000474648 CTNNA3Q9UI47 895 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 PALD1Q9ULE6 856 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 TACC3Q9Y6A5 838 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 TAF6LQ9Y6J9 622 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 MYH7P12883 1935 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 AK9Q5TCS8 1911 aa11.94□□□□□ -0.5
COL8A1-206ENST00000474648 SLC27A2O14975 620 aa11.93□□□□□ -0.5
COL8A1-206ENST00000474648 GALR2O43603 387 aaPredicted RBP11.93□□□□□ -0.5
COL8A1-206ENST00000474648 CYP21A2P08686 494 aa11.93□□□□□ -0.5
COL8A1-206ENST00000474648 POTEIP0CG38 1075 aa11.93□□□□□ -0.5
COL8A1-206ENST00000474648 POTEJP0CG39 1038 aa11.93□□□□□ -0.5
COL8A1-206ENST00000474648 TDO2P48775 406 aa11.93□□□□□ -0.5
COL8A1-206ENST00000474648 CDAN1Q8IWY9 1227 aa11.93□□□□□ -0.5
COL8A1-206ENST00000474648 TEPSINQ96N21 525 aa11.93□□□□□ -0.5
COL8A1-206ENST00000474648 NBPF3Q9H094 633 aa11.93□□□□□ -0.5
COL8A1-206ENST00000474648 ANAPC4Q9UJX5 808 aa11.93□□□□□ -0.5
COL8A1-206ENST00000474648 PITPNM2Q9BZ72 1349 aa11.92□□□□□ -0.5
COL8A1-206ENST00000474648 MINDY4BA8MYZ0 360 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms