RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ADORA1P30542 326 aa17.4■□□□□ 0.38
CCDC78-209ENST00000474647 GPAT2Q6NUI2 795 aa17.4■□□□□ 0.38
CCDC78-209ENST00000474647 CHRDL2Q6WN34 429 aa17.4■□□□□ 0.38
CCDC78-209ENST00000474647 SCYL3Q8IZE3 742 aa17.4■□□□□ 0.38
CCDC78-209ENST00000474647 ZGPATQ8N5A5 531 aaKnown RBP17.4■□□□□ 0.38
CCDC78-209ENST00000474647 NKX2-3Q8TAU0 364 aa17.4■□□□□ 0.38
CCDC78-209ENST00000474647 RNF208Q9H0X6 261 aa17.4■□□□□ 0.38
CCDC78-209ENST00000474647 FBXO3Q9UK99 471 aa17.4■□□□□ 0.38
CCDC78-209ENST00000474647 LRRFIP2Q9Y608 721 aaKnown RBP17.4■□□□□ 0.38
CCDC78-209ENST00000474647 ZHX2Q9Y6X8 837 aa17.4■□□□□ 0.38
CCDC78-209ENST00000474647 ATRNL1Q5VV63 1379 aa17.4■□□□□ 0.38
CCDC78-209ENST00000474647 CXCL11O14625 94 aa17.39■□□□□ 0.37
CCDC78-209ENST00000474647 SEMA3EO15041 775 aa17.39■□□□□ 0.37
CCDC78-209ENST00000474647 BCRP11274 1271 aa17.39■□□□□ 0.37
CCDC78-209ENST00000474647 IL15P40933 162 aaPredicted RBP17.39■□□□□ 0.37
CCDC78-209ENST00000474647 UBXN2AP68543 259 aa17.39■□□□□ 0.37
CCDC78-209ENST00000474647 SLFN5Q08AF3 891 aa17.39■□□□□ 0.37
CCDC78-209ENST00000474647 PICALMQ13492 652 aa17.39■□□□□ 0.37
CCDC78-209ENST00000474647 ABCF2Q9UG63 623 aa17.39■□□□□ 0.37
CCDC78-209ENST00000474647 RFX7Q2KHR2 1363 aa17.39■□□□□ 0.37
CCDC78-209ENST00000474647 SIPA1L1O43166 1804 aa17.38■□□□□ 0.37
CCDC78-209ENST00000474647 ENTPD3O75355 529 aa17.38■□□□□ 0.37
CCDC78-209ENST00000474647 CCDC102BQ68D86 513 aa17.38■□□□□ 0.37
CCDC78-209ENST00000474647 FASTKD5Q7L8L6 764 aaKnown RBP17.38■□□□□ 0.37
CCDC78-209ENST00000474647 CDCA7LQ96GN5 454 aa17.38■□□□□ 0.37
CCDC78-209ENST00000474647 GABRQQ9UN88 632 aa17.38■□□□□ 0.37
CCDC78-209ENST00000474647 A0A0G2JLL6 359 aaPredicted RBP17.37■□□□□ 0.37
CCDC78-209ENST00000474647 PHF20L1A8MW92 1017 aa17.37■□□□□ 0.37
CCDC78-209ENST00000474647 SLURP2P0DP57 97 aa17.37■□□□□ 0.37
CCDC78-209ENST00000474647 PTPRAP18433 802 aa17.37■□□□□ 0.37
CCDC78-209ENST00000474647 GJA8P48165 433 aa17.37■□□□□ 0.37
CCDC78-209ENST00000474647 PRRT2Q7Z6L0 340 aaPredicted RBP17.37■□□□□ 0.37
CCDC78-209ENST00000474647 SLAIN1Q8ND83 568 aa17.37■□□□□ 0.37
CCDC78-209ENST00000474647 SMCR8Q8TEV9 937 aaPredicted RBP17.37■□□□□ 0.37
CCDC78-209ENST00000474647 IDI2Q9BXS1 227 aa17.37■□□□□ 0.37
CCDC78-209ENST00000474647 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.37■□□□□ 0.37
CCDC78-209ENST00000474647 GAKO14976 1311 aa17.37■□□□□ 0.37
CCDC78-209ENST00000474647 PLXNB2O15031 1838 aa17.37■□□□□ 0.37
CCDC78-209ENST00000474647 DDTLA6NHG4 134 aaPredicted RBP17.36■□□□□ 0.37
CCDC78-209ENST00000474647 TRIM75PA6NK02 468 aa17.36■□□□□ 0.37
CCDC78-209ENST00000474647 GJB1P08034 283 aa17.36■□□□□ 0.37
CCDC78-209ENST00000474647 BTDP43251 543 aa17.36■□□□□ 0.37
CCDC78-209ENST00000474647 RASGRF1Q13972 1273 aa17.36■□□□□ 0.37
CCDC78-209ENST00000474647 SH3BP5LQ7L8J4 393 aa17.36■□□□□ 0.37
CCDC78-209ENST00000474647 SLF2Q8IX21 1173 aa17.36■□□□□ 0.37
CCDC78-209ENST00000474647 HTATIP2Q9BUP3 242 aa17.36■□□□□ 0.37
CCDC78-209ENST00000474647 UNC93B1Q9H1C4 597 aa17.36■□□□□ 0.37
CCDC78-209ENST00000474647 TAOK2Q9UL54 1235 aa17.36■□□□□ 0.37
CCDC78-209ENST00000474647 NOB1Q9ULX3 412 aaKnown RBP17.36■□□□□ 0.37
CCDC78-209ENST00000474647 DDX60LQ5H9U9 1706 aaKnown RBP17.35■□□□□ 0.37
CCDC78-209ENST00000474647 MYH1P12882 1939 aa17.35■□□□□ 0.37
CCDC78-209ENST00000474647 TNPO2O14787 897 aaKnown RBP17.35■□□□□ 0.37
CCDC78-209ENST00000474647 ADCY3O60266 1144 aa17.35■□□□□ 0.37
CCDC78-209ENST00000474647 ELNP15502 786 aa17.35■□□□□ 0.37
CCDC78-209ENST00000474647 CCDC84Q86UT8 332 aaPredicted RBP17.35■□□□□ 0.37
CCDC78-209ENST00000474647 DDX4Q9NQI0 724 aaKnown RBP17.35■□□□□ 0.37
CCDC78-209ENST00000474647 HDAC5Q9UQL6 1122 aa17.35■□□□□ 0.37
CCDC78-209ENST00000474647 AFG3L2Q9Y4W6 797 aa17.35■□□□□ 0.37
CCDC78-209ENST00000474647 MROH7-TTC4A0A0A0MT08 1334 aa17.35■□□□□ 0.37
CCDC78-209ENST00000474647 A0A1B0GUL7 405 aa17.34■□□□□ 0.37
CCDC78-209ENST00000474647 FARP2O94887 1054 aaPredicted RBP17.34■□□□□ 0.37
CCDC78-209ENST00000474647 TIMM10P62072 90 aa17.34■□□□□ 0.37
CCDC78-209ENST00000474647 SPTY2D1Q68D10 685 aaPredicted RBP17.34■□□□□ 0.37
CCDC78-209ENST00000474647 U2AF1L4Q8WU68 220 aaKnown RBP17.34■□□□□ 0.37
CCDC78-209ENST00000474647 MEIS3Q99687 375 aa17.34■□□□□ 0.37
CCDC78-209ENST00000474647 COPRSQ9NQ92 184 aa17.34■□□□□ 0.37
CCDC78-209ENST00000474647 RBM27Q9P2N5 1060 aaKnown RBP17.34■□□□□ 0.37
CCDC78-209ENST00000474647 FAM196BA6NMK8 535 aa17.33■□□□□ 0.36
CCDC78-209ENST00000474647 CTNND1O60716 968 aaKnown RBP17.33■□□□□ 0.36
CCDC78-209ENST00000474647 INHAP05111 366 aa17.33■□□□□ 0.36
CCDC78-209ENST00000474647 FLT3LGP49771 235 aa17.33■□□□□ 0.36
CCDC78-209ENST00000474647 ERICH6Q7L0X2 663 aa17.33■□□□□ 0.36
CCDC78-209ENST00000474647 API5Q9BZZ5 524 aaKnown RBP17.33■□□□□ 0.36
CCDC78-209ENST00000474647 FRMPD3Q5JV73 1810 aa17.33■□□□□ 0.36
CCDC78-209ENST00000474647 PDS5AQ29RF7 1337 aaKnown RBP17.32■□□□□ 0.36
CCDC78-209ENST00000474647 MECOMQ03112 1051 aa17.32■□□□□ 0.36
CCDC78-209ENST00000474647 TFCP2Q12800 502 aa17.32■□□□□ 0.36
CCDC78-209ENST00000474647 UBE2Q1Q7Z7E8 422 aa17.32■□□□□ 0.36
CCDC78-209ENST00000474647 ANKRD13CQ8N6S4 541 aa17.32■□□□□ 0.36
CCDC78-209ENST00000474647 XAGE2Q96GT9 111 aa17.32■□□□□ 0.36
CCDC78-209ENST00000474647 NEUROD6Q96NK8 337 aa17.32■□□□□ 0.36
CCDC78-209ENST00000474647 SLC45A1Q9Y2W3 748 aa17.32■□□□□ 0.36
CCDC78-209ENST00000474647 SRGAP3O43295 1099 aa17.31■□□□□ 0.36
CCDC78-209ENST00000474647 MVPQ14764 893 aaKnown RBP17.31■□□□□ 0.36
CCDC78-209ENST00000474647 TREML2Q5T2D2 321 aa17.31■□□□□ 0.36
CCDC78-209ENST00000474647 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.31■□□□□ 0.36
CCDC78-209ENST00000474647 AGTPBP1Q9UPW5 1226 aa17.31■□□□□ 0.36
CCDC78-209ENST00000474647 AKAP2Q9Y2D5 859 aa17.31■□□□□ 0.36
CCDC78-209ENST00000474647 NR2E3Q9Y5X4 410 aa17.31■□□□□ 0.36
CCDC78-209ENST00000474647 SGPL1O95470 568 aa17.3■□□□□ 0.36
CCDC78-209ENST00000474647 TFRCP02786 760 aaKnown RBP17.3■□□□□ 0.36
CCDC78-209ENST00000474647 MAP3K10Q02779 954 aa17.3■□□□□ 0.36
CCDC78-209ENST00000474647 PI16Q6UXB8 463 aa17.3■□□□□ 0.36
CCDC78-209ENST00000474647 COA7Q96BR5 231 aa17.3■□□□□ 0.36
CCDC78-209ENST00000474647 FAM163AQ96GL9 167 aaPredicted RBP17.3■□□□□ 0.36
CCDC78-209ENST00000474647 DEFB118Q96PH6 123 aa17.3■□□□□ 0.36
CCDC78-209ENST00000474647 PNMA3Q9UL41 463 aa17.3■□□□□ 0.36
CCDC78-209ENST00000474647 CT47B1P0C2W7 299 aaPredicted RBP17.29■□□□□ 0.36
CCDC78-209ENST00000474647 RHBDL3P58872 404 aa17.29■□□□□ 0.36
CCDC78-209ENST00000474647 GORABQ5T7V8 394 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms