RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 GOLGA8AA7E2F4 631 aa25.37■■□□□ 1.65
CCM2-206ENST00000474617 UVSSAQ2YD98 709 aa25.37■■□□□ 1.65
CCM2-206ENST00000474617 GGA1Q9UJY5 639 aa25.37■■□□□ 1.65
CCM2-206ENST00000474617 ORC4O43929 436 aa25.37■■□□□ 1.65
CCM2-206ENST00000474617 LDHBP07195 334 aaKnown RBP25.37■■□□□ 1.65
CCM2-206ENST00000474617 KLRK1P26718 216 aa25.37■■□□□ 1.65
CCM2-206ENST00000474617 PPP1R9BQ96SB3 815 aa25.37■■□□□ 1.65
CCM2-206ENST00000474617 LRRC37AA6NMS7 1700 aa25.36■■□□□ 1.65
CCM2-206ENST00000474617 NRXN2Q9P2S2 1712 aa25.36■■□□□ 1.65
CCM2-206ENST00000474617 BAG3O95817 575 aa25.36■■□□□ 1.65
CCM2-206ENST00000474617 IFNAR1P17181 557 aa25.36■■□□□ 1.65
CCM2-206ENST00000474617 SLF2Q8IX21 1173 aa25.36■■□□□ 1.65
CCM2-206ENST00000474617 CCDC24Q8N4L8 307 aa25.36■■□□□ 1.65
CCM2-206ENST00000474617 TBC1D22AQ8WUA7 517 aa25.36■■□□□ 1.65
CCM2-206ENST00000474617 NOL10Q9BSC4 688 aaKnown RBP25.36■■□□□ 1.65
CCM2-206ENST00000474617 CALM1P0DP23 149 aa25.35■■□□□ 1.65
CCM2-206ENST00000474617 CALM2P0DP24 149 aa25.35■■□□□ 1.65
CCM2-206ENST00000474617 CALM3P0DP25 149 aa25.35■■□□□ 1.65
CCM2-206ENST00000474617 IL1R1P14778 569 aa25.35■■□□□ 1.65
CCM2-206ENST00000474617 IARSP41252 1262 aaKnown RBP25.35■■□□□ 1.65
CCM2-206ENST00000474617 CHAF1AQ13111 956 aaPredicted RBP25.35■■□□□ 1.65
CCM2-206ENST00000474617 IQCA1Q86XH1 822 aa25.35■■□□□ 1.65
CCM2-206ENST00000474617 AKT1S1Q96B36 256 aa25.35■■□□□ 1.65
CCM2-206ENST00000474617 PANK2Q9BZ23 570 aa25.35■■□□□ 1.65
CCM2-206ENST00000474617 ADD1P35611 737 aaKnown RBP25.34■■□□□ 1.65
CCM2-206ENST00000474617 PPP4CP60510 307 aa25.34■■□□□ 1.65
CCM2-206ENST00000474617 DDR1Q08345 913 aa25.34■■□□□ 1.65
CCM2-206ENST00000474617 TRIM29Q14134 588 aa25.34■■□□□ 1.65
CCM2-206ENST00000474617 TRIM22Q8IYM9 498 aa25.34■■□□□ 1.65
CCM2-206ENST00000474617 PROM2Q8N271 834 aa25.34■■□□□ 1.65
CCM2-206ENST00000474617 ZNF384Q8TF68 577 aa25.34■■□□□ 1.65
CCM2-206ENST00000474617 SDR42E1Q8WUS8 393 aa25.34■■□□□ 1.65
CCM2-206ENST00000474617 RBSNQ9H1K0 784 aa25.34■■□□□ 1.65
CCM2-206ENST00000474617 TOMM22Q9NS69 142 aa25.34■■□□□ 1.65
CCM2-206ENST00000474617 RTEL1Q9NZ71 1219 aa25.34■■□□□ 1.65
CCM2-206ENST00000474617 WTIPA6NIX2 430 aaPredicted RBP25.33■■□□□ 1.65
CCM2-206ENST00000474617 MINDY4BA8MYZ0 360 aa25.33■■□□□ 1.65
CCM2-206ENST00000474617 SP8Q8IXZ3 490 aa25.33■■□□□ 1.65
CCM2-206ENST00000474617 AMOTL1Q8IY63 956 aa25.33■■□□□ 1.65
CCM2-206ENST00000474617 LAMB1P07942 1786 aa25.33■■□□□ 1.65
CCM2-206ENST00000474617 YEATS4O95619 227 aa25.32■■□□□ 1.64
CCM2-206ENST00000474617 SSRP1Q08945 709 aaKnown RBP25.32■■□□□ 1.64
CCM2-206ENST00000474617 CCDC178Q5BJE1 867 aa25.32■■□□□ 1.64
CCM2-206ENST00000474617 MICU3Q86XE3 530 aa25.32■■□□□ 1.64
CCM2-206ENST00000474617 KCNG4Q8TDN1 519 aa25.32■■□□□ 1.64
CCM2-206ENST00000474617 NUP62CLQ9H1M0 184 aa25.32■■□□□ 1.64
CCM2-206ENST00000474617 POLR3EQ9NVU0 708 aa25.32■■□□□ 1.64
CCM2-206ENST00000474617 UFL1O94874 794 aa25.32■■□□□ 1.64
CCM2-206ENST00000474617 FMNL1O95466 1100 aaPredicted RBP25.32■■□□□ 1.64
CCM2-206ENST00000474617 PLCG2P16885 1265 aa25.32■■□□□ 1.64
CCM2-206ENST00000474617 PRDX5P30044 214 aa25.32■■□□□ 1.64
CCM2-206ENST00000474617 GPSM2P81274 684 aa25.32■■□□□ 1.64
CCM2-206ENST00000474617 PDE4BQ07343 736 aa25.32■■□□□ 1.64
CCM2-206ENST00000474617 NTRK3Q16288 839 aa25.32■■□□□ 1.64
CCM2-206ENST00000474617 RTN1Q16799 776 aa25.32■■□□□ 1.64
CCM2-206ENST00000474617 RRP12Q5JTH9 1297 aaKnown RBP25.32■■□□□ 1.64
CCM2-206ENST00000474617 CTR9Q6PD62 1173 aa25.32■■□□□ 1.64
CCM2-206ENST00000474617 ALG1Q9BT22 464 aa25.32■■□□□ 1.64
CCM2-206ENST00000474617 DCP1AQ9NPI6 582 aaPredicted RBP25.32■■□□□ 1.64
CCM2-206ENST00000474617 TFIP11Q9UBB9 837 aaKnown RBP25.32■■□□□ 1.64
CCM2-206ENST00000474617 SUGT1Q9Y2Z0 365 aa25.32■■□□□ 1.64
CCM2-206ENST00000474617 CTAGE5O15320 804 aa25.31■■□□□ 1.64
CCM2-206ENST00000474617 PDE6BP35913 854 aa25.31■■□□□ 1.64
CCM2-206ENST00000474617 DYNLL1P63167 89 aaKnown RBP25.31■■□□□ 1.64
CCM2-206ENST00000474617 FAM173BQ6P4H8 233 aa25.31■■□□□ 1.64
CCM2-206ENST00000474617 TXNRD3Q86VQ6 643 aa25.31■■□□□ 1.64
CCM2-206ENST00000474617 TRIM44Q96DX7 344 aaPredicted RBP25.31■■□□□ 1.64
CCM2-206ENST00000474617 RBM28Q9NW13 759 aaKnown RBP25.31■■□□□ 1.64
CCM2-206ENST00000474617 CAVIN2O95810 425 aa25.3■■□□□ 1.64
CCM2-206ENST00000474617 CCDC192P0DO97 292 aa25.3■■□□□ 1.64
CCM2-206ENST00000474617 NPR1P16066 1061 aa25.3■■□□□ 1.64
CCM2-206ENST00000474617 ALDH1B1P30837 517 aa25.3■■□□□ 1.64
CCM2-206ENST00000474617 SEC23AQ15436 765 aa25.3■■□□□ 1.64
CCM2-206ENST00000474617 MAP3K11Q16584 847 aa25.3■■□□□ 1.64
CCM2-206ENST00000474617 HS1BP3Q53T59 392 aa25.3■■□□□ 1.64
CCM2-206ENST00000474617 ZSCAN10Q96SZ4 725 aaPredicted RBP25.3■■□□□ 1.64
CCM2-206ENST00000474617 CD209Q9NNX6 404 aa25.3■■□□□ 1.64
CCM2-206ENST00000474617 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.3■■□□□ 1.64
CCM2-206ENST00000474617 APBA3O96018 575 aa25.29■■□□□ 1.64
CCM2-206ENST00000474617 RXRBP28702 533 aa25.29■■□□□ 1.64
CCM2-206ENST00000474617 FAM43AQ8N2R8 423 aa25.29■■□□□ 1.64
CCM2-206ENST00000474617 BICD2Q8TD16 824 aa25.29■■□□□ 1.64
CCM2-206ENST00000474617 AATFQ9NY61 560 aaKnown RBP eCLIP25.29■■□□□ 1.64
CCM2-206ENST00000474617 TNKSO95271 1327 aa25.29■■□□□ 1.64
CCM2-206ENST00000474617 A0A1W2PQ27 194 aa25.28■■□□□ 1.64
CCM2-206ENST00000474617 A0A1W2PQ64 194 aa25.28■■□□□ 1.64
CCM2-206ENST00000474617 A0A1W2PQD8 194 aa25.28■■□□□ 1.64
CCM2-206ENST00000474617 DTNBO60941 627 aa25.28■■□□□ 1.64
CCM2-206ENST00000474617 DDAH1O94760 285 aa25.28■■□□□ 1.64
CCM2-206ENST00000474617 KIF23Q02241 960 aaPredicted RBP25.28■■□□□ 1.64
CCM2-206ENST00000474617 RBM43Q6ZSC3 357 aaKnown RBP25.28■■□□□ 1.64
CCM2-206ENST00000474617 CATIPQ7Z7H3 387 aa25.28■■□□□ 1.64
CCM2-206ENST00000474617 ZNF654Q8IZM8 581 aa25.28■■□□□ 1.64
CCM2-206ENST00000474617 FAM163AQ96GL9 167 aaPredicted RBP25.28■■□□□ 1.64
CCM2-206ENST00000474617 TMX4Q9H1E5 349 aaPredicted RBP25.28■■□□□ 1.64
CCM2-206ENST00000474617 ZNF287Q9HBT7 754 aa25.28■■□□□ 1.64
CCM2-206ENST00000474617 FAM217BQ9NTX9 383 aaPredicted RBP25.28■■□□□ 1.64
CCM2-206ENST00000474617 ATP6V0A2Q9Y487 856 aa25.28■■□□□ 1.64
CCM2-206ENST00000474617 TACC3Q9Y6A5 838 aa25.28■■□□□ 1.64
CCM2-206ENST00000474617 ROBO3Q96MS0 1386 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms