RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 SREBF2Q12772 1141 aa19.51■□□□□ 0.71
ITGB1-210ENST00000474568 REM2Q8IYK8 340 aaPredicted RBP19.51■□□□□ 0.71
ITGB1-210ENST00000474568 UNCXA6NJT0 531 aa19.5■□□□□ 0.71
ITGB1-210ENST00000474568 GOLIM4O00461 696 aa19.5■□□□□ 0.71
ITGB1-210ENST00000474568 ZBTB48P10074 688 aaPredicted RBP19.5■□□□□ 0.71
ITGB1-210ENST00000474568 DYNLL1P63167 89 aaKnown RBP19.5■□□□□ 0.71
ITGB1-210ENST00000474568 MAGEB6Q8N7X4 407 aa19.5■□□□□ 0.71
ITGB1-210ENST00000474568 EDC3Q96F86 508 aaKnown RBP19.5■□□□□ 0.71
ITGB1-210ENST00000474568 OTUD5Q96G74 571 aa19.5■□□□□ 0.71
ITGB1-210ENST00000474568 BOLA2Q9H3K6 86 aa19.5■□□□□ 0.71
ITGB1-210ENST00000474568 DCTPP1Q9H773 170 aa19.5■□□□□ 0.71
ITGB1-210ENST00000474568 SAGE1Q9NXZ1 904 aa19.5■□□□□ 0.71
ITGB1-210ENST00000474568 SNCAIPQ9Y6H5 919 aa19.5■□□□□ 0.71
ITGB1-210ENST00000474568 AKAP11Q9UKA4 1901 aa19.49■□□□□ 0.71
ITGB1-210ENST00000474568 MANSC4A6NHS7 340 aaPredicted RBP19.49■□□□□ 0.71
ITGB1-210ENST00000474568 TBC1D8O95759 1140 aa19.49■□□□□ 0.71
ITGB1-210ENST00000474568 BAG3O95817 575 aa19.49■□□□□ 0.71
ITGB1-210ENST00000474568 TM4SF4P48230 202 aa19.49■□□□□ 0.71
ITGB1-210ENST00000474568 MIGA1Q8NAN2 632 aa19.49■□□□□ 0.71
ITGB1-210ENST00000474568 MAP3K12Q12852 859 aa19.48■□□□□ 0.71
ITGB1-210ENST00000474568 MAPKAPK5Q8IW41 473 aa19.48■□□□□ 0.71
ITGB1-210ENST00000474568 OTOFQ9HC10 1997 aa19.47■□□□□ 0.71
ITGB1-210ENST00000474568 FAM196BA6NMK8 535 aa19.47■□□□□ 0.71
ITGB1-210ENST00000474568 TGFBRAP1Q8WUH2 860 aa19.47■□□□□ 0.71
ITGB1-210ENST00000474568 OSBPL5Q9H0X9 879 aaPredicted RBP19.47■□□□□ 0.71
ITGB1-210ENST00000474568 IGF2BP3O00425 579 aaKnown RBP eCLIP19.46■□□□□ 0.71
ITGB1-210ENST00000474568 TSHZ3Q63HK5 1081 aa19.46■□□□□ 0.71
ITGB1-210ENST00000474568 IFNL1Q8IU54 200 aa19.46■□□□□ 0.71
ITGB1-210ENST00000474568 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.46■□□□□ 0.71
ITGB1-210ENST00000474568 ATRNL1Q5VV63 1379 aa19.45■□□□□ 0.7
ITGB1-210ENST00000474568 SPDYE5A6NIY4 337 aa19.45■□□□□ 0.7
ITGB1-210ENST00000474568 CAPN15O75808 1086 aa19.45■□□□□ 0.7
ITGB1-210ENST00000474568 MAP4K4O95819 1239 aaPredicted RBP19.45■□□□□ 0.7
ITGB1-210ENST00000474568 PLCG2P16885 1265 aa19.45■□□□□ 0.7
ITGB1-210ENST00000474568 PPP4CP60510 307 aa19.45■□□□□ 0.7
ITGB1-210ENST00000474568 TTF1Q15361 905 aaPredicted RBP19.45■□□□□ 0.7
ITGB1-210ENST00000474568 SLC4A8Q2Y0W8 1093 aa19.45■□□□□ 0.7
ITGB1-210ENST00000474568 R3HDMLQ9H3Y0 253 aa19.45■□□□□ 0.7
ITGB1-210ENST00000474568 ZNF112Q9UJU3 913 aa19.45■□□□□ 0.7
ITGB1-210ENST00000474568 SUPT16HQ9Y5B9 1047 aaKnown RBP19.45■□□□□ 0.7
ITGB1-210ENST00000474568 MAST2Q6P0Q8 1798 aa19.44■□□□□ 0.7
ITGB1-210ENST00000474568 CCL15-CCL14A0A0B4J2E2 113 aa19.44■□□□□ 0.7
ITGB1-210ENST00000474568 ATP5JP18859 108 aa19.44■□□□□ 0.7
ITGB1-210ENST00000474568 CCL15Q16663 113 aa19.44■□□□□ 0.7
ITGB1-210ENST00000474568 SLC9C2Q5TAH2 1124 aa19.44■□□□□ 0.7
ITGB1-210ENST00000474568 ERO1BQ86YB8 467 aa19.44■□□□□ 0.7
ITGB1-210ENST00000474568 PAG1Q9NWQ8 432 aa19.44■□□□□ 0.7
ITGB1-210ENST00000474568 SAP30BPQ9UHR5 308 aaKnown RBP19.44■□□□□ 0.7
ITGB1-210ENST00000474568 IRF6O14896 467 aa19.43■□□□□ 0.7
ITGB1-210ENST00000474568 NPM3O75607 178 aaKnown RBP19.43■□□□□ 0.7
ITGB1-210ENST00000474568 PDE6AP16499 860 aa19.43■□□□□ 0.7
ITGB1-210ENST00000474568 INHBEP58166 350 aa19.43■□□□□ 0.7
ITGB1-210ENST00000474568 SLFNL1Q499Z3 407 aa19.43■□□□□ 0.7
ITGB1-210ENST00000474568 IFFO2Q5TF58 517 aa19.43■□□□□ 0.7
ITGB1-210ENST00000474568 EXOC6Q8TAG9 804 aa19.43■□□□□ 0.7
ITGB1-210ENST00000474568 BRI3BPQ8WY22 251 aa19.43■□□□□ 0.7
ITGB1-210ENST00000474568 MS4A4AQ96JQ5 239 aa19.43■□□□□ 0.7
ITGB1-210ENST00000474568 PTPN18Q99952 460 aa19.43■□□□□ 0.7
ITGB1-210ENST00000474568 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.43■□□□□ 0.7
ITGB1-210ENST00000474568 FLT1P17948 1338 aa19.43■□□□□ 0.7
ITGB1-210ENST00000474568 AK9Q5TCS8 1911 aa19.43■□□□□ 0.7
ITGB1-210ENST00000474568 MYO5AQ9Y4I1 1855 aaKnown RBP19.42■□□□□ 0.7
ITGB1-210ENST00000474568 PHF20L1A8MW92 1017 aa19.42■□□□□ 0.7
ITGB1-210ENST00000474568 GTF2A2P52657 109 aa19.42■□□□□ 0.7
ITGB1-210ENST00000474568 HAUS7Q99871 368 aa19.42■□□□□ 0.7
ITGB1-210ENST00000474568 ECHDC1Q9NTX5 307 aa19.42■□□□□ 0.7
ITGB1-210ENST00000474568 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.42■□□□□ 0.7
ITGB1-210ENST00000474568 ZNF532Q9HCE3 1301 aa19.42■□□□□ 0.7
ITGB1-210ENST00000474568 IGSF3O75054 1194 aa19.41■□□□□ 0.7
ITGB1-210ENST00000474568 USP5P45974 858 aa19.41■□□□□ 0.7
ITGB1-210ENST00000474568 PPIL2Q13356 520 aa19.41■□□□□ 0.7
ITGB1-210ENST00000474568 NOL9Q5SY16 702 aaKnown RBP19.41■□□□□ 0.7
ITGB1-210ENST00000474568 CCDC84Q86UT8 332 aaPredicted RBP19.41■□□□□ 0.7
ITGB1-210ENST00000474568 OTUD7AQ8TE49 926 aaPredicted RBP19.41■□□□□ 0.7
ITGB1-210ENST00000474568 PALD1Q9ULE6 856 aa19.41■□□□□ 0.7
ITGB1-210ENST00000474568 MAGEB6P1A0A0J9YX57 407 aa19.4■□□□□ 0.7
ITGB1-210ENST00000474568 TESPA1A2RU30 521 aaPredicted RBP19.4■□□□□ 0.7
ITGB1-210ENST00000474568 ALDH1A1P00352 501 aa19.4■□□□□ 0.7
ITGB1-210ENST00000474568 CHGBP05060 677 aa19.4■□□□□ 0.7
ITGB1-210ENST00000474568 PPATQ06203 517 aa19.4■□□□□ 0.7
ITGB1-210ENST00000474568 SNAPC2Q13487 334 aa19.4■□□□□ 0.7
ITGB1-210ENST00000474568 OTUD7BQ6GQQ9 843 aa19.4■□□□□ 0.7
ITGB1-210ENST00000474568 SCYL3Q8IZE3 742 aa19.4■□□□□ 0.7
ITGB1-210ENST00000474568 ZNF296Q8WUU4 475 aaPredicted RBP19.4■□□□□ 0.7
ITGB1-210ENST00000474568 GPATCH3Q96I76 525 aa19.4■□□□□ 0.7
ITGB1-210ENST00000474568 PICK1Q9NRD5 415 aa19.4■□□□□ 0.7
ITGB1-210ENST00000474568 GPR25O00155 361 aa19.39■□□□□ 0.69
ITGB1-210ENST00000474568 IRX6P78412 446 aaPredicted RBP19.39■□□□□ 0.69
ITGB1-210ENST00000474568 MAP3K10Q02779 954 aa19.39■□□□□ 0.69
ITGB1-210ENST00000474568 DGKZQ13574 1117 aa19.39■□□□□ 0.69
ITGB1-210ENST00000474568 FAM43AQ8N2R8 423 aa19.39■□□□□ 0.69
ITGB1-210ENST00000474568 DOCK2Q92608 1830 aa19.39■□□□□ 0.69
ITGB1-210ENST00000474568 CASP8AP2Q9UKL3 1982 aa19.39■□□□□ 0.69
ITGB1-210ENST00000474568 TCRBV5S4A2TA0A5A2 114 aa19.38■□□□□ 0.69
ITGB1-210ENST00000474568 COL2A1P02458 1487 aaPredicted RBP19.38■□□□□ 0.69
ITGB1-210ENST00000474568 CETPP11597 493 aa19.38■□□□□ 0.69
ITGB1-210ENST00000474568 CRHR2Q13324 411 aa19.38■□□□□ 0.69
ITGB1-210ENST00000474568 ANKRD45Q5TZF3 282 aa19.38■□□□□ 0.69
ITGB1-210ENST00000474568 RIOK1Q9BRS2 568 aaKnown RBP19.38■□□□□ 0.69
ITGB1-210ENST00000474568 TRIM34Q9BYJ4 488 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms