RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 SBK1Q52WX2 424 aa12.27□□□□□ -0.45
COL12A1-206ENST00000474564 PRMT6Q96LA8 375 aaPredicted RBP12.27□□□□□ -0.45
COL12A1-206ENST00000474564 KRT23Q9C075 422 aa12.27□□□□□ -0.45
COL12A1-206ENST00000474564 VEZTQ9HBM0 779 aa12.27□□□□□ -0.45
COL12A1-206ENST00000474564 DCP1AQ9NPI6 582 aaPredicted RBP12.27□□□□□ -0.45
COL12A1-206ENST00000474564 ADARB2Q9NS39 739 aaKnown RBP12.27□□□□□ -0.45
COL12A1-206ENST00000474564 TOMM22Q9NS69 142 aa12.27□□□□□ -0.45
COL12A1-206ENST00000474564 USP17L12C9JPN9 530 aa12.26□□□□□ -0.45
COL12A1-206ENST00000474564 USP17L21D6R901 530 aa12.26□□□□□ -0.45
COL12A1-206ENST00000474564 PPARAQ07869 468 aa12.26□□□□□ -0.45
COL12A1-206ENST00000474564 TSGA10IPQ3SY00 556 aa12.26□□□□□ -0.45
COL12A1-206ENST00000474564 PNMA8AQ86V59 439 aaPredicted RBP12.26□□□□□ -0.45
COL12A1-206ENST00000474564 APOBEC3FQ8IUX4 373 aaKnown RBP12.26□□□□□ -0.45
COL12A1-206ENST00000474564 MAPKAPK5Q8IW41 473 aa12.26□□□□□ -0.45
COL12A1-206ENST00000474564 CRACR2BQ8N4Y2 399 aaPredicted RBP12.26□□□□□ -0.45
COL12A1-206ENST00000474564 NCOA7Q8NI08 942 aa12.26□□□□□ -0.45
COL12A1-206ENST00000474564 NEK1Q96PY6 1258 aa12.26□□□□□ -0.45
COL12A1-206ENST00000474564 IDI2Q9BXS1 227 aa12.26□□□□□ -0.45
COL12A1-206ENST00000474564 IL25Q9H293 177 aa12.26□□□□□ -0.45
COL12A1-206ENST00000474564 MKNK2Q9HBH9 465 aa12.26□□□□□ -0.45
COL12A1-206ENST00000474564 ZNF70Q9UC06 446 aaPredicted RBP12.26□□□□□ -0.45
COL12A1-206ENST00000474564 CYP46A1Q9Y6A2 500 aa12.26□□□□□ -0.45
COL12A1-206ENST00000474564 WNT10BO00744 389 aa12.25□□□□□ -0.45
COL12A1-206ENST00000474564 RHBDL3P58872 404 aa12.25□□□□□ -0.45
COL12A1-206ENST00000474564 SART3Q15020 963 aaKnown RBP12.25□□□□□ -0.45
COL12A1-206ENST00000474564 SPDYE2Q495Y8 402 aa12.25□□□□□ -0.45
COL12A1-206ENST00000474564 TBC1D10BQ4KMP7 808 aaPredicted RBP12.25□□□□□ -0.45
COL12A1-206ENST00000474564 AKNAD1Q5T1N1 836 aa12.25□□□□□ -0.45
COL12A1-206ENST00000474564 BLOC1S2Q6QNY1 142 aa12.25□□□□□ -0.45
COL12A1-206ENST00000474564 USP50Q70EL3 339 aaPredicted RBP12.25□□□□□ -0.45
COL12A1-206ENST00000474564 FOXP4Q8IVH2 680 aaPredicted RBP12.25□□□□□ -0.45
COL12A1-206ENST00000474564 ZNF444Q8N0Y2 327 aaPredicted RBP12.25□□□□□ -0.45
COL12A1-206ENST00000474564 DCPSQ96C86 337 aaKnown RBP12.25□□□□□ -0.45
COL12A1-206ENST00000474564 JAKMIP1Q96N16 626 aaKnown RBP12.25□□□□□ -0.45
COL12A1-206ENST00000474564 TM6SF1Q9BZW5 370 aa12.25□□□□□ -0.45
COL12A1-206ENST00000474564 COL4A5P29400 1685 aa12.25□□□□□ -0.45
COL12A1-206ENST00000474564 MYH2Q9UKX2 1941 aa12.25□□□□□ -0.45
COL12A1-206ENST00000474564 CLRN2A0PK11 232 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 ERICH2A1L162 156 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 TCP10L2B9ZVM9 353 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 FLT1P17948 1338 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 MCM2P49736 904 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 HAND2P61296 217 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 TCP10Q12799 353 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 ANKRD1Q15327 319 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 CCDC178Q5BJE1 867 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 C12orf60Q5U649 245 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 CTR9Q6PD62 1173 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 SAMD7Q7Z3H4 446 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 FAM83AQ86UY5 434 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 FAM151AQ8WW52 585 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 ESR2Q92731 530 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 CHMP4CQ96CF2 233 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 L3MBTL3Q96JM7 780 aaPredicted RBP12.24□□□□□ -0.45
COL12A1-206ENST00000474564 IPO9Q96P70 1041 aaKnown RBP12.24□□□□□ -0.45
COL12A1-206ENST00000474564 OSBPL5Q9H0X9 879 aaPredicted RBP12.24□□□□□ -0.45
COL12A1-206ENST00000474564 PI4KBQ9UBF8 816 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 SWAP70Q9UH65 585 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 SAP30BPQ9UHR5 308 aaKnown RBP12.24□□□□□ -0.45
COL12A1-206ENST00000474564 ANAPC4Q9UJX5 808 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 SNX14Q9Y5W7 946 aa12.24□□□□□ -0.45
COL12A1-206ENST00000474564 DICER1Q9UPY3 1922 aaKnown RBP12.23□□□□□ -0.45
COL12A1-206ENST00000474564 PSME4Q14997 1843 aa12.23□□□□□ -0.45
COL12A1-206ENST00000474564 E7EWF7 191 aa12.23□□□□□ -0.45
COL12A1-206ENST00000474564 WDHD1O75717 1129 aaPredicted RBP12.23□□□□□ -0.45
COL12A1-206ENST00000474564 CYP21A2P08686 494 aa12.23□□□□□ -0.45
COL12A1-206ENST00000474564 CASTP20810 708 aaKnown RBP12.23□□□□□ -0.45
COL12A1-206ENST00000474564 MCM5P33992 734 aa12.23□□□□□ -0.45
COL12A1-206ENST00000474564 EPHX2P34913 555 aa12.23□□□□□ -0.45
COL12A1-206ENST00000474564 NEK4P51957 841 aa12.23□□□□□ -0.45
COL12A1-206ENST00000474564 PPP4R3BQ5MIZ7 849 aa12.23□□□□□ -0.45
COL12A1-206ENST00000474564 KCNB2Q92953 911 aa12.23□□□□□ -0.45
COL12A1-206ENST00000474564 PALD1Q9ULE6 856 aa12.23□□□□□ -0.45
COL12A1-206ENST00000474564 SCN9AQ15858 1988 aa12.23□□□□□ -0.45
COL12A1-206ENST00000474564 VEGFAP15692 232 aaPredicted RBP12.22□□□□□ -0.45
COL12A1-206ENST00000474564 EPS15P42566 896 aa12.22□□□□□ -0.45
COL12A1-206ENST00000474564 NBPF9Q3BBW0 867 aa12.22□□□□□ -0.45
COL12A1-206ENST00000474564 RRP12Q5JTH9 1297 aaKnown RBP12.22□□□□□ -0.45
COL12A1-206ENST00000474564 RUFY3Q7L099 469 aa12.22□□□□□ -0.45
COL12A1-206ENST00000474564 DHX32Q7L7V1 743 aaKnown RBP12.22□□□□□ -0.45
COL12A1-206ENST00000474564 IQCA1Q86XH1 822 aa12.22□□□□□ -0.45
COL12A1-206ENST00000474564 SULF1Q8IWU6 871 aa12.22□□□□□ -0.45
COL12A1-206ENST00000474564 ZC3H15Q8WU90 426 aaKnown RBP12.22□□□□□ -0.45
COL12A1-206ENST00000474564 STAG1Q8WVM7 1258 aa12.22□□□□□ -0.45
COL12A1-206ENST00000474564 EPB41L4AQ9HCS5 686 aaPredicted RBP12.22□□□□□ -0.45
COL12A1-206ENST00000474564 SERPINB13Q9UIV8 391 aa12.22□□□□□ -0.45
COL12A1-206ENST00000474564 CLEC11AQ9Y240 323 aa12.22□□□□□ -0.45
COL12A1-206ENST00000474564 PPP2R3BQ9Y5P8 575 aa12.22□□□□□ -0.45
COL12A1-206ENST00000474564 MYO5AQ9Y4I1 1855 aaKnown RBP12.22□□□□□ -0.45
COL12A1-206ENST00000474564 SBF1O95248 1867 aa12.21□□□□□ -0.45
COL12A1-206ENST00000474564 RANBP6O60518 1105 aaKnown RBP12.21□□□□□ -0.45
COL12A1-206ENST00000474564 NF2P35240 595 aa12.21□□□□□ -0.45
COL12A1-206ENST00000474564 CACNB3P54284 484 aa12.21□□□□□ -0.45
COL12A1-206ENST00000474564 CTDSPL2Q05D32 466 aa12.21□□□□□ -0.45
COL12A1-206ENST00000474564 SUPT20HL1Q3ZLR7 823 aa12.21□□□□□ -0.45
COL12A1-206ENST00000474564 DCAF15Q66K64 600 aa12.21□□□□□ -0.45
COL12A1-206ENST00000474564 SYNE3Q6ZMZ3 975 aa12.21□□□□□ -0.45
COL12A1-206ENST00000474564 HSCBQ8IWL3 235 aa12.21□□□□□ -0.45
COL12A1-206ENST00000474564 TMTC2Q8N394 836 aa12.21□□□□□ -0.45
COL12A1-206ENST00000474564 ZBED3Q96IU2 234 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms