RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 TCP10L2B9ZVM9 353 aa12.48□□□□□ -0.41
CASC3-204ENST00000474190 TRAF5O00463 557 aa12.48□□□□□ -0.41
CASC3-204ENST00000474190 RASA3Q14644 834 aa12.48□□□□□ -0.41
CASC3-204ENST00000474190 C8orf34Q49A92 452 aa12.48□□□□□ -0.41
CASC3-204ENST00000474190 TGFBRAP1Q8WUH2 860 aa12.48□□□□□ -0.41
CASC3-204ENST00000474190 ESYT1Q9BSJ8 1104 aa12.48□□□□□ -0.41
CASC3-204ENST00000474190 GLIS2Q9BZE0 524 aaPredicted RBP12.48□□□□□ -0.41
CASC3-204ENST00000474190 TMEM39BQ9GZU3 492 aa12.48□□□□□ -0.41
CASC3-204ENST00000474190 CCDC171Q6TFL3 1326 aa12.47□□□□□ -0.41
CASC3-204ENST00000474190 PASKQ96RG2 1323 aa12.47□□□□□ -0.41
CASC3-204ENST00000474190 BAG3O95817 575 aa12.47□□□□□ -0.41
CASC3-204ENST00000474190 PTH1RQ03431 593 aa12.47□□□□□ -0.41
CASC3-204ENST00000474190 FAM83AQ86UY5 434 aa12.47□□□□□ -0.41
CASC3-204ENST00000474190 MAPKAPK5Q8IW41 473 aa12.47□□□□□ -0.41
CASC3-204ENST00000474190 TEX11Q8IYF3 940 aa12.47□□□□□ -0.41
CASC3-204ENST00000474190 NKX2-3Q8TAU0 364 aa12.47□□□□□ -0.41
CASC3-204ENST00000474190 LSG1Q9H089 658 aaKnown RBP12.47□□□□□ -0.41
CASC3-204ENST00000474190 NBPF3Q9H094 633 aa12.47□□□□□ -0.41
CASC3-204ENST00000474190 OSBPL5Q9H0X9 879 aaPredicted RBP12.47□□□□□ -0.41
CASC3-204ENST00000474190 DEFB129Q9H1M3 183 aa12.47□□□□□ -0.41
CASC3-204ENST00000474190 DNAJC18Q9H819 358 aa12.47□□□□□ -0.41
CASC3-204ENST00000474190 CYP2D7A0A087X1C5 515 aa12.46□□□□□ -0.41
CASC3-204ENST00000474190 ENTPD3O75355 529 aa12.46□□□□□ -0.41
CASC3-204ENST00000474190 CDC45O75419 566 aa12.46□□□□□ -0.41
CASC3-204ENST00000474190 SEC24BO95487 1268 aa12.46□□□□□ -0.41
CASC3-204ENST00000474190 CYP2D6P10635 497 aa12.46□□□□□ -0.41
CASC3-204ENST00000474190 HSPD1P10809 573 aaKnown RBP12.46□□□□□ -0.41
CASC3-204ENST00000474190 MAP3K10Q02779 954 aa12.46□□□□□ -0.41
CASC3-204ENST00000474190 CHADLQ6NUI6 762 aa12.46□□□□□ -0.41
CASC3-204ENST00000474190 USP48Q86UV5 1035 aa12.46□□□□□ -0.41
CASC3-204ENST00000474190 METTL16Q86W50 562 aaKnown RBP12.46□□□□□ -0.41
CASC3-204ENST00000474190 FAM151AQ8WW52 585 aa12.46□□□□□ -0.41
CASC3-204ENST00000474190 AIDAQ96BJ3 306 aa12.46□□□□□ -0.41
CASC3-204ENST00000474190 VEZTQ9HBM0 779 aa12.46□□□□□ -0.41
CASC3-204ENST00000474190 DIAPH3Q9NSV4 1193 aa12.46□□□□□ -0.41
CASC3-204ENST00000474190 TAF6LQ9Y6J9 622 aa12.46□□□□□ -0.41
CASC3-204ENST00000474190 COL2A1P02458 1487 aaPredicted RBP12.46□□□□□ -0.42
CASC3-204ENST00000474190 MYH2Q9UKX2 1941 aa12.45□□□□□ -0.42
CASC3-204ENST00000474190 RAD50Q92878 1312 aa12.45□□□□□ -0.42
CASC3-204ENST00000474190 PATL2C9JE40 543 aaKnown RBP12.45□□□□□ -0.42
CASC3-204ENST00000474190 HIP1O00291 1037 aa12.45□□□□□ -0.42
CASC3-204ENST00000474190 PLCG2P16885 1265 aa12.45□□□□□ -0.42
CASC3-204ENST00000474190 PLCD1P51178 756 aa12.45□□□□□ -0.42
CASC3-204ENST00000474190 GABPAQ06546 454 aa12.45□□□□□ -0.42
CASC3-204ENST00000474190 TCP10Q12799 353 aa12.45□□□□□ -0.42
CASC3-204ENST00000474190 PICALMQ13492 652 aa12.45□□□□□ -0.42
CASC3-204ENST00000474190 COL9A3Q14050 684 aaPredicted RBP12.45□□□□□ -0.42
CASC3-204ENST00000474190 RRP1BQ14684 758 aaKnown RBP12.45□□□□□ -0.42
CASC3-204ENST00000474190 ALX1Q15699 326 aa12.45□□□□□ -0.42
CASC3-204ENST00000474190 LRRFIP1Q32MZ4 808 aaKnown RBP12.45□□□□□ -0.42
CASC3-204ENST00000474190 NBPF12Q5TAG4 269 aaPredicted RBP12.45□□□□□ -0.42
CASC3-204ENST00000474190 CTR9Q6PD62 1173 aa12.45□□□□□ -0.42
CASC3-204ENST00000474190 KRT26Q7Z3Y9 468 aa12.45□□□□□ -0.42
CASC3-204ENST00000474190 IFNL3Q8IZI9 196 aa12.45□□□□□ -0.42
CASC3-204ENST00000474190 PALD1Q9ULE6 856 aa12.45□□□□□ -0.42
CASC3-204ENST00000474190 SLC4A4Q9Y6R1 1079 aa12.45□□□□□ -0.42
CASC3-204ENST00000474190 DDX60LQ5H9U9 1706 aaKnown RBP12.45□□□□□ -0.42
CASC3-204ENST00000474190 FGAP02671 866 aa12.44□□□□□ -0.42
CASC3-204ENST00000474190 CST9Q5W186 159 aa12.44□□□□□ -0.42
CASC3-204ENST00000474190 GIMAP6Q6P9H5 292 aa12.44□□□□□ -0.42
CASC3-204ENST00000474190 CDC37L1Q7L3B6 337 aa12.44□□□□□ -0.42
CASC3-204ENST00000474190 CERS3Q8IU89 383 aa12.44□□□□□ -0.42
CASC3-204ENST00000474190 APOBEC3FQ8IUX4 373 aaKnown RBP12.44□□□□□ -0.42
CASC3-204ENST00000474190 CDCA5Q96FF9 252 aa12.44□□□□□ -0.42
CASC3-204ENST00000474190 CRNKL1Q9BZJ0 848 aaKnown RBP12.44□□□□□ -0.42
CASC3-204ENST00000474190 ATP8A2Q9NTI2 1148 aa12.44□□□□□ -0.42
CASC3-204ENST00000474190 FZD1Q9UP38 647 aa12.44□□□□□ -0.42
CASC3-204ENST00000474190 ZMYM6O95789 1325 aa12.43□□□□□ -0.42
CASC3-204ENST00000474190 USP17L12C9JPN9 530 aa12.43□□□□□ -0.42
CASC3-204ENST00000474190 USP17L21D6R901 530 aa12.43□□□□□ -0.42
CASC3-204ENST00000474190 MYO1BO43795 1136 aa12.43□□□□□ -0.42
CASC3-204ENST00000474190 JAG1P78504 1218 aa12.43□□□□□ -0.42
CASC3-204ENST00000474190 SBK1Q52WX2 424 aa12.43□□□□□ -0.42
CASC3-204ENST00000474190 C12orf60Q5U649 245 aa12.43□□□□□ -0.42
CASC3-204ENST00000474190 MAP4K1Q92918 833 aa12.43□□□□□ -0.42
CASC3-204ENST00000474190 DCPSQ96C86 337 aaKnown RBP12.43□□□□□ -0.42
CASC3-204ENST00000474190 DSCC1Q9BVC3 393 aa12.43□□□□□ -0.42
CASC3-204ENST00000474190 SAP30BPQ9UHR5 308 aaKnown RBP12.43□□□□□ -0.42
CASC3-204ENST00000474190 PPP2R3BQ9Y5P8 575 aa12.43□□□□□ -0.42
CASC3-204ENST00000474190 PHF20L1A8MW92 1017 aa12.42□□□□□ -0.42
CASC3-204ENST00000474190 FOXN1O15353 648 aa12.42□□□□□ -0.42
CASC3-204ENST00000474190 GNAT2P19087 354 aa12.42□□□□□ -0.42
CASC3-204ENST00000474190 SHROOM1Q2M3G4 852 aaPredicted RBP12.42□□□□□ -0.42
CASC3-204ENST00000474190 SULF1Q8IWU6 871 aa12.42□□□□□ -0.42
CASC3-204ENST00000474190 INCENPQ9NQS7 918 aa12.42□□□□□ -0.42
CASC3-204ENST00000474190 CLEC11AQ9Y240 323 aa12.42□□□□□ -0.42
CASC3-204ENST00000474190 SIPA1L1O43166 1804 aa12.41□□□□□ -0.42
CASC3-204ENST00000474190 FAM196BA6NMK8 535 aa12.41□□□□□ -0.42
CASC3-204ENST00000474190 USP2O75604 605 aaPredicted RBP12.41□□□□□ -0.42
CASC3-204ENST00000474190 FGRP09769 529 aa12.41□□□□□ -0.42
CASC3-204ENST00000474190 SLC4A8Q2Y0W8 1093 aa12.41□□□□□ -0.42
CASC3-204ENST00000474190 MOB2Q70IA6 237 aa12.41□□□□□ -0.42
CASC3-204ENST00000474190 SLC44A5Q8NCS7 719 aa12.41□□□□□ -0.42
CASC3-204ENST00000474190 DYNLL2Q96FJ2 89 aa12.41□□□□□ -0.42
CASC3-204ENST00000474190 MCM9Q9NXL9 1143 aa12.41□□□□□ -0.42
CASC3-204ENST00000474190 ZNF112Q9UJU3 913 aa12.41□□□□□ -0.42
CASC3-204ENST00000474190 ROBO3Q96MS0 1386 aa12.41□□□□□ -0.42
CASC3-204ENST00000474190 MYH7P12883 1935 aa12.41□□□□□ -0.42
CASC3-204ENST00000474190 TBC1D12O60347 775 aa12.4□□□□□ -0.42
CASC3-204ENST00000474190 SHMT1P34896 483 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms