RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 GJB1P08034 283 aa6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 OSBPP22059 807 aa6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 PSMC4P43686 418 aa6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 GJA8P48165 433 aa6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 PPATQ06203 517 aa6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 CHAF1AQ13111 956 aaPredicted RBP6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 MOGSQ13724 837 aa6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 APOBEC3HQ6NTF7 200 aaKnown RBP6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 NKX2-3Q8TAU0 364 aa6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 TBC1D22AQ8WUA7 517 aa6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 KAZALD1Q96I82 304 aa6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 ZDHHC15Q96MV8 337 aa6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 HTATIP2Q9BUP3 242 aa6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 CPA4Q9UI42 421 aa6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 IQSEC3Q9UPP2 1182 aaPredicted RBP6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 MROH5Q6ZUA9 1318 aa6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 MYPNQ86TC9 1320 aa6.49□□□□□ -1.37
SNRNP40-204ENST00000474025 PDHXO00330 501 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 ALDH1L1O75891 902 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 CCL5P13501 91 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 INPP5BP32019 993 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 GRK4P32298 578 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 PRKCZQ05513 592 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 EXOSC9Q06265 439 aaKnown RBP6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 CCDC184Q52MB2 194 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 DCAF15Q66K64 600 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 ANKRD23Q86SG2 305 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 VPS37DQ86XT2 251 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 VGLL2Q8N8G2 317 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 RAET1EQ8TD07 263 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 DPF3Q92784 378 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 MARVELD3Q96A59 401 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 HOOK2Q96ED9 719 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 SUCLG2Q96I99 432 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 MRIQ9BWK5 157 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 ZNF341Q9BYN7 854 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 C9orf78Q9NZ63 289 aaPredicted RBP6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 TMOD2Q9NZR1 351 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 KCNH4Q9UQ05 1017 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 SUGT1Q9Y2Z0 365 aa6.48□□□□□ -1.37
SNRNP40-204ENST00000474025 ZBTB7BO15156 539 aaPredicted RBP6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 FRAT2O75474 233 aaPredicted RBP6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 FARP2O94887 1054 aaPredicted RBP6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 FMNL1O95466 1100 aaPredicted RBP6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 BCRP11274 1271 aa6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 HOXB3P14651 431 aaPredicted RBP6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 HOXD10P28358 340 aa6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 LRRC24Q50LG9 513 aa6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 CAVIN4Q5BKX8 364 aa6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 METTL24Q5JXM2 366 aa6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 HHIPL2Q6UWX4 724 aa6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 MIGA2Q7L4E1 593 aa6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 U2AF1L4Q8WU68 220 aaKnown RBP6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 PARK7Q99497 189 aaKnown RBP6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 RNF208Q9H0X6 261 aa6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 BICC1Q9H694 974 aaKnown RBP6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 ZNF112Q9UJU3 913 aa6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 UTYO14607 1347 aa6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 MAST3O60307 1309 aa6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 KIF16BQ96L93 1317 aa6.47□□□□□ -1.37
SNRNP40-204ENST00000474025 ATRNL1Q5VV63 1379 aa6.46□□□□□ -1.37
SNRNP40-204ENST00000474025 SOX1O00570 391 aaPredicted RBP6.46□□□□□ -1.38
SNRNP40-204ENST00000474025 PDE8BO95263 885 aa6.46□□□□□ -1.38
SNRNP40-204ENST00000474025 NBPF7P0C2Y1 421 aaPredicted RBP6.46□□□□□ -1.38
SNRNP40-204ENST00000474025 BCAMP50895 628 aa6.46□□□□□ -1.38
SNRNP40-204ENST00000474025 EMP3P54852 163 aa6.46□□□□□ -1.38
SNRNP40-204ENST00000474025 UBXN2AP68543 259 aa6.46□□□□□ -1.38
SNRNP40-204ENST00000474025 NFIAQ12857 509 aa6.46□□□□□ -1.38
SNRNP40-204ENST00000474025 RABL6Q3YEC7 729 aaPredicted RBP6.46□□□□□ -1.38
SNRNP40-204ENST00000474025 NOL9Q5SY16 702 aaKnown RBP6.46□□□□□ -1.38
SNRNP40-204ENST00000474025 GPAT2Q6NUI2 795 aa6.46□□□□□ -1.38
SNRNP40-204ENST00000474025 SLC4A10Q6U841 1118 aa6.46□□□□□ -1.38
SNRNP40-204ENST00000474025 WDR63Q8IWG1 891 aa6.46□□□□□ -1.38
SNRNP40-204ENST00000474025 ANKRD44Q8N8A2 993 aa6.46□□□□□ -1.38
SNRNP40-204ENST00000474025 FAM151AQ8WW52 585 aa6.46□□□□□ -1.38
SNRNP40-204ENST00000474025 SRCIN1Q9C0H9 1055 aa6.46□□□□□ -1.38
SNRNP40-204ENST00000474025 UNC93B1Q9H1C4 597 aa6.46□□□□□ -1.38
SNRNP40-204ENST00000474025 BIN2Q9UBW5 565 aaPredicted RBP6.46□□□□□ -1.38
SNRNP40-204ENST00000474025 GABRQQ9UN88 632 aa6.46□□□□□ -1.38
SNRNP40-204ENST00000474025 A0A0G2JLL6 359 aaPredicted RBP6.45□□□□□ -1.38
SNRNP40-204ENST00000474025 CXCL11O14625 94 aa6.45□□□□□ -1.38
SNRNP40-204ENST00000474025 SGPL1O95470 568 aa6.45□□□□□ -1.38
SNRNP40-204ENST00000474025 INHAP05111 366 aa6.45□□□□□ -1.38
SNRNP40-204ENST00000474025 CYP2C8P10632 490 aa6.45□□□□□ -1.38
SNRNP40-204ENST00000474025 ELNP15502 786 aa6.45□□□□□ -1.38
SNRNP40-204ENST00000474025 FGFR2P21802 821 aa6.45□□□□□ -1.38
SNRNP40-204ENST00000474025 FCGRTP55899 365 aa6.45□□□□□ -1.38
SNRNP40-204ENST00000474025 TCP10Q12799 353 aa6.45□□□□□ -1.38
SNRNP40-204ENST00000474025 PUM3Q15397 648 aaKnown RBP6.45□□□□□ -1.38
SNRNP40-204ENST00000474025 DIXDC1Q155Q3 683 aa6.45□□□□□ -1.38
SNRNP40-204ENST00000474025 CDC42EP5Q6NZY7 148 aa6.45□□□□□ -1.38
SNRNP40-204ENST00000474025 PRRT2Q7Z6L0 340 aaPredicted RBP6.45□□□□□ -1.38
SNRNP40-204ENST00000474025 FBXO22Q8NEZ5 403 aa6.45□□□□□ -1.38
SNRNP40-204ENST00000474025 LRCH3Q96II8 777 aa6.45□□□□□ -1.38
SNRNP40-204ENST00000474025 FAM198AQ9UFP1 575 aa6.45□□□□□ -1.38
SNRNP40-204ENST00000474025 DAGLAQ9Y4D2 1042 aa6.45□□□□□ -1.38
SNRNP40-204ENST00000474025 PHF20L1A8MW92 1017 aa6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 ADCY3O60266 1144 aa6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 EVI5O60447 810 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms