RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 C14orf37Q86TY3 774 aa7.29□□□□□ -1.24
ATPAF1-204ENST00000474020 THUMPD2Q9BTF0 503 aaKnown RBP7.29□□□□□ -1.24
ATPAF1-204ENST00000474020 GSX2Q9BZM3 304 aa7.29□□□□□ -1.24
ATPAF1-204ENST00000474020 PRDM6Q9NQX0 595 aa7.29□□□□□ -1.24
ATPAF1-204ENST00000474020 TNNQ9UQP3 1299 aa7.29□□□□□ -1.24
ATPAF1-204ENST00000474020 STARD13Q9Y3M8 1113 aa7.29□□□□□ -1.24
ATPAF1-204ENST00000474020 ABCC4O15439 1325 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 MAP3K19Q56UN5 1328 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 NALCNQ8IZF0 1738 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 XRN1Q8IZH2 1706 aaKnown RBP7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 M0R082 166 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 CHL1O00533 1208 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 ALBP02768 609 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 FBLN1P23142 703 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 GRNP28799 593 aaKnown RBP7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 DEKP35659 375 aaKnown RBP7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 ARSDP51689 593 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 NUCB1Q02818 461 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 OCLNQ16625 522 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 CASC1Q6TDU7 716 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 CHD1LQ86WJ1 897 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 ZNF417Q8TAU3 575 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 STK32AQ8WU08 396 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 CCDC97Q96F63 343 aaPredicted RBP7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 PRIMPOLQ96LW4 560 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 ZNF587Q96SQ5 575 aaPredicted RBP7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 PLVAPQ9BX97 442 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 C11orf16Q9NQ32 467 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 BABAM1Q9NWV8 329 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 TSPYL4Q9UJ04 414 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 SERPINA10Q9UK55 444 aa7.28□□□□□ -1.24
ATPAF1-204ENST00000474020 SSH2Q76I76 1423 aa7.27□□□□□ -1.24
ATPAF1-204ENST00000474020 ELL2O00472 640 aaPredicted RBP7.27□□□□□ -1.25
ATPAF1-204ENST00000474020 PRMT3O60678 531 aa7.27□□□□□ -1.25
ATPAF1-204ENST00000474020 MICAL2O94851 1124 aa7.27□□□□□ -1.25
ATPAF1-204ENST00000474020 KCNA6P17658 529 aa7.27□□□□□ -1.25
ATPAF1-204ENST00000474020 CCT4P50991 539 aaKnown RBP7.27□□□□□ -1.25
ATPAF1-204ENST00000474020 HSP90AB2PQ58FF8 381 aa7.27□□□□□ -1.25
ATPAF1-204ENST00000474020 HSCBQ8IWL3 235 aa7.27□□□□□ -1.25
ATPAF1-204ENST00000474020 RPAP2Q8IXW5 612 aaPredicted RBP7.27□□□□□ -1.25
ATPAF1-204ENST00000474020 MICALL1Q8N3F8 863 aa7.27□□□□□ -1.25
ATPAF1-204ENST00000474020 ABTB2Q8N961 1025 aa7.27□□□□□ -1.25
ATPAF1-204ENST00000474020 KCNH5Q8NCM2 988 aa7.27□□□□□ -1.25
ATPAF1-204ENST00000474020 PBXIP1Q96AQ6 731 aa7.27□□□□□ -1.25
ATPAF1-204ENST00000474020 TBC1D32Q96NH3 1257 aa7.27□□□□□ -1.25
ATPAF1-204ENST00000474020 PNMA5Q96PV4 448 aa7.27□□□□□ -1.25
ATPAF1-204ENST00000474020 PSMG3-AS1Q96PY0 264 aa7.27□□□□□ -1.25
ATPAF1-204ENST00000474020 UBE2OQ9C0C9 1292 aaKnown RBP7.27□□□□□ -1.25
ATPAF1-204ENST00000474020 LRFN2Q9ULH4 789 aa7.27□□□□□ -1.25
ATPAF1-204ENST00000474020 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.27□□□□□ -1.25
ATPAF1-204ENST00000474020 FAM83GA6ND36 823 aa7.26□□□□□ -1.25
ATPAF1-204ENST00000474020 GNAT3A8MTJ3 354 aa7.26□□□□□ -1.25
ATPAF1-204ENST00000474020 MFAP1P55081 439 aaKnown RBP7.26□□□□□ -1.25
ATPAF1-204ENST00000474020 COL9A3Q14050 684 aaPredicted RBP7.26□□□□□ -1.25
ATPAF1-204ENST00000474020 BMP2KLQ5H9B9 411 aa7.26□□□□□ -1.25
ATPAF1-204ENST00000474020 ANKRD45Q5TZF3 282 aa7.26□□□□□ -1.25
ATPAF1-204ENST00000474020 INTS3Q68E01 1043 aaKnown RBP7.26□□□□□ -1.25
ATPAF1-204ENST00000474020 C20orf204Q6ZNR8 217 aa7.26□□□□□ -1.25
ATPAF1-204ENST00000474020 AEBP1Q8IUX7 1158 aa7.26□□□□□ -1.25
ATPAF1-204ENST00000474020 TSPYL6Q8N831 410 aa7.26□□□□□ -1.25
ATPAF1-204ENST00000474020 C8orf58Q8NAV2 365 aa7.26□□□□□ -1.25
ATPAF1-204ENST00000474020 C22orf23Q9BZE7 217 aa7.26□□□□□ -1.25
ATPAF1-204ENST00000474020 IGSF1Q8N6C5 1336 aa7.26□□□□□ -1.25
ATPAF1-204ENST00000474020 KDRP35968 1356 aa7.25□□□□□ -1.25
ATPAF1-204ENST00000474020 FMN2Q9NZ56 1722 aa7.25□□□□□ -1.25
ATPAF1-204ENST00000474020 KRTAP9-6A0A140TA67 174 aa7.25□□□□□ -1.25
ATPAF1-204ENST00000474020 SPATA31C1P0DKV0 1188 aa7.25□□□□□ -1.25
ATPAF1-204ENST00000474020 NFKB1P19838 968 aa7.25□□□□□ -1.25
ATPAF1-204ENST00000474020 HOXC9P31274 260 aa7.25□□□□□ -1.25
ATPAF1-204ENST00000474020 COX20Q5RI15 118 aa7.25□□□□□ -1.25
ATPAF1-204ENST00000474020 TMEM164Q5U3C3 297 aa7.25□□□□□ -1.25
ATPAF1-204ENST00000474020 CCDC30Q5VVM6 783 aa7.25□□□□□ -1.25
ATPAF1-204ENST00000474020 MCM10Q7L590 875 aa7.25□□□□□ -1.25
ATPAF1-204ENST00000474020 COL26A1Q96A83 441 aa7.25□□□□□ -1.25
ATPAF1-204ENST00000474020 IFT43Q96FT9 208 aa7.25□□□□□ -1.25
ATPAF1-204ENST00000474020 LNPKQ9C0E8 428 aa7.25□□□□□ -1.25
ATPAF1-204ENST00000474020 CXXC1Q9P0U4 656 aaPredicted RBP7.25□□□□□ -1.25
ATPAF1-204ENST00000474020 SLC6A14Q9UN76 642 aa7.25□□□□□ -1.25
ATPAF1-204ENST00000474020 ADGRL3Q9HAR2 1447 aa7.25□□□□□ -1.25
ATPAF1-204ENST00000474020 ZNF142P52746 1687 aaPredicted RBP7.25□□□□□ -1.25
ATPAF1-204ENST00000474020 MAP3K5Q99683 1374 aa7.24□□□□□ -1.25
ATPAF1-204ENST00000474020 C1QTNF9BB2RNN3 333 aa7.24□□□□□ -1.25
ATPAF1-204ENST00000474020 CDC45O75419 566 aa7.24□□□□□ -1.25
ATPAF1-204ENST00000474020 NID1P14543 1247 aa7.24□□□□□ -1.25
ATPAF1-204ENST00000474020 TBC1D8BQ0IIM8 1120 aa7.24□□□□□ -1.25
ATPAF1-204ENST00000474020 DCTN1Q14203 1278 aa7.24□□□□□ -1.25
ATPAF1-204ENST00000474020 PRRT3Q5FWE3 981 aa7.24□□□□□ -1.25
ATPAF1-204ENST00000474020 C8orf86Q6ZUL3 223 aa7.24□□□□□ -1.25
ATPAF1-204ENST00000474020 CD163Q86VB7 1156 aa7.24□□□□□ -1.25
ATPAF1-204ENST00000474020 IGFLR1Q9H665 355 aa7.24□□□□□ -1.25
ATPAF1-204ENST00000474020 DNAJB12Q9NXW2 375 aaKnown RBP7.24□□□□□ -1.25
ATPAF1-204ENST00000474020 HDAC5Q9UQL6 1122 aa7.24□□□□□ -1.25
ATPAF1-204ENST00000474020 RGPD1P0DJD0 1748 aa7.24□□□□□ -1.25
ATPAF1-204ENST00000474020 ADAMTSL3P82987 1691 aa7.23□□□□□ -1.25
ATPAF1-204ENST00000474020 MAP3K6O95382 1288 aa7.23□□□□□ -1.25
ATPAF1-204ENST00000474020 HSP90AA1P07900 732 aaKnown RBP7.23□□□□□ -1.25
ATPAF1-204ENST00000474020 GNAI3P08754 354 aa7.23□□□□□ -1.25
ATPAF1-204ENST00000474020 CHRNA4P43681 627 aa7.23□□□□□ -1.25
ATPAF1-204ENST00000474020 HSPA2P54652 639 aa7.23□□□□□ -1.25
ATPAF1-204ENST00000474020 NFKBIBQ15653 356 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms