RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 FAM83AQ86UY5 434 aa8.68□□□□□ -1.02
CKS1B-205ENST00000473344 SUCLG2Q96I99 432 aa8.68□□□□□ -1.02
CKS1B-205ENST00000473344 ZDHHC15Q96MV8 337 aa8.68□□□□□ -1.02
CKS1B-205ENST00000473344 RIPOR2Q9Y4F9 1068 aa8.68□□□□□ -1.02
CKS1B-205ENST00000473344 C2orf72A6NCS6 295 aa8.67□□□□□ -1.02
CKS1B-205ENST00000473344 BTBD19C9JJ37 291 aa8.67□□□□□ -1.02
CKS1B-205ENST00000473344 IRF6O14896 467 aa8.67□□□□□ -1.02
CKS1B-205ENST00000473344 ANP32CO43423 234 aa8.67□□□□□ -1.02
CKS1B-205ENST00000473344 LAMB1P07942 1786 aa8.67□□□□□ -1.02
CKS1B-205ENST00000473344 HOXD10P28358 340 aa8.67□□□□□ -1.02
CKS1B-205ENST00000473344 FXR1P51114 621 aaKnown RBP eCLIP8.67□□□□□ -1.02
CKS1B-205ENST00000473344 LSM11P83369 360 aaKnown RBP eCLIP8.67□□□□□ -1.02
CKS1B-205ENST00000473344 PPIL2Q13356 520 aa8.67□□□□□ -1.02
CKS1B-205ENST00000473344 GRIK5Q16478 980 aa8.67□□□□□ -1.02
CKS1B-205ENST00000473344 LRRC24Q50LG9 513 aa8.67□□□□□ -1.02
CKS1B-205ENST00000473344 FBXO33Q7Z6M2 555 aa8.67□□□□□ -1.02
CKS1B-205ENST00000473344 TMC2Q8TDI7 906 aa8.67□□□□□ -1.02
CKS1B-205ENST00000473344 ZNF341Q9BYN7 854 aa8.67□□□□□ -1.02
CKS1B-205ENST00000473344 BICC1Q9H694 974 aaKnown RBP8.67□□□□□ -1.02
CKS1B-205ENST00000473344 SUGT1Q9Y2Z0 365 aa8.67□□□□□ -1.02
CKS1B-205ENST00000473344 SNCAIPQ9Y6H5 919 aa8.67□□□□□ -1.02
CKS1B-205ENST00000473344 SZT2Q5T011 3432 aa8.67□□□□□ -1.02
CKS1B-205ENST00000473344 A0A1B0GUL6 1792 aa8.66□□□□□ -1.02
CKS1B-205ENST00000473344 FMNL1O95466 1100 aaPredicted RBP8.66□□□□□ -1.02
CKS1B-205ENST00000473344 IFIT1P09914 478 aaKnown RBP8.66□□□□□ -1.02
CKS1B-205ENST00000473344 BCAMP50895 628 aa8.66□□□□□ -1.02
CKS1B-205ENST00000473344 PPATQ06203 517 aa8.66□□□□□ -1.02
CKS1B-205ENST00000473344 PUM3Q15397 648 aaKnown RBP8.66□□□□□ -1.02
CKS1B-205ENST00000473344 FKBP1CQ5VVH2 108 aa8.66□□□□□ -1.02
CKS1B-205ENST00000473344 MIGA2Q7L4E1 593 aa8.66□□□□□ -1.02
CKS1B-205ENST00000473344 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.66□□□□□ -1.02
CKS1B-205ENST00000473344 RAET1EQ8TD07 263 aa8.66□□□□□ -1.02
CKS1B-205ENST00000473344 DPF3Q92784 378 aa8.66□□□□□ -1.02
CKS1B-205ENST00000473344 KAZALD1Q96I82 304 aa8.66□□□□□ -1.02
CKS1B-205ENST00000473344 MRIQ9BWK5 157 aa8.66□□□□□ -1.02
CKS1B-205ENST00000473344 ARHGAP39Q9C0H5 1083 aa8.66□□□□□ -1.02
CKS1B-205ENST00000473344 RBBP6Q7Z6E9 1792 aaKnown RBP8.66□□□□□ -1.02
CKS1B-205ENST00000473344 UTYO14607 1347 aa8.65□□□□□ -1.02
CKS1B-205ENST00000473344 OTOFQ9HC10 1997 aa8.65□□□□□ -1.02
CKS1B-205ENST00000473344 H0YGN5 161 aa8.65□□□□□ -1.02
CKS1B-205ENST00000473344 PDHXO00330 501 aa8.65□□□□□ -1.02
CKS1B-205ENST00000473344 PRKCSHP14314 528 aaPredicted RBP8.65□□□□□ -1.02
CKS1B-205ENST00000473344 PSMC4P43686 418 aa8.65□□□□□ -1.02
CKS1B-205ENST00000473344 TCP10Q12799 353 aa8.65□□□□□ -1.02
CKS1B-205ENST00000473344 RABL6Q3YEC7 729 aaPredicted RBP8.65□□□□□ -1.02
CKS1B-205ENST00000473344 APOBEC3HQ6NTF7 200 aaKnown RBP8.65□□□□□ -1.02
CKS1B-205ENST00000473344 HHIPL2Q6UWX4 724 aa8.65□□□□□ -1.02
CKS1B-205ENST00000473344 NKX2-3Q8TAU0 364 aa8.65□□□□□ -1.02
CKS1B-205ENST00000473344 WDR66Q8TBY9 1149 aa8.65□□□□□ -1.02
CKS1B-205ENST00000473344 FAM151AQ8WW52 585 aa8.65□□□□□ -1.02
CKS1B-205ENST00000473344 BIN2Q9UBW5 565 aaPredicted RBP8.65□□□□□ -1.02
CKS1B-205ENST00000473344 CPA4Q9UI42 421 aa8.65□□□□□ -1.02
CKS1B-205ENST00000473344 RANBP2P49792 3224 aaKnown RBP8.64□□□□□ -1.03
CKS1B-205ENST00000473344 RPAP1Q9BWH6 1393 aaPredicted RBP8.64□□□□□ -1.03
CKS1B-205ENST00000473344 KIF16BQ96L93 1317 aa8.64□□□□□ -1.03
CKS1B-205ENST00000473344 ARAP2Q8WZ64 1704 aa8.64□□□□□ -1.03
CKS1B-205ENST00000473344 SLC5A1P13866 664 aa8.64□□□□□ -1.03
CKS1B-205ENST00000473344 INPP5BP32019 993 aa8.64□□□□□ -1.03
CKS1B-205ENST00000473344 GRK4P32298 578 aa8.64□□□□□ -1.03
CKS1B-205ENST00000473344 UBXN2AP68543 259 aa8.64□□□□□ -1.03
CKS1B-205ENST00000473344 C17orf99Q6UX52 265 aa8.64□□□□□ -1.03
CKS1B-205ENST00000473344 ANKRD23Q86SG2 305 aa8.64□□□□□ -1.03
CKS1B-205ENST00000473344 FAM9BQ8IZU0 186 aa8.64□□□□□ -1.03
CKS1B-205ENST00000473344 VGLL2Q8N8G2 317 aa8.64□□□□□ -1.03
CKS1B-205ENST00000473344 KLHDC4Q8TBB5 520 aa8.64□□□□□ -1.03
CKS1B-205ENST00000473344 LPIN2Q92539 896 aa8.64□□□□□ -1.03
CKS1B-205ENST00000473344 TRIM47Q96LD4 638 aa8.64□□□□□ -1.03
CKS1B-205ENST00000473344 PARK7Q99497 189 aaKnown RBP8.64□□□□□ -1.03
CKS1B-205ENST00000473344 HTATIP2Q9BUP3 242 aa8.64□□□□□ -1.03
CKS1B-205ENST00000473344 SRRDQ9UH36 339 aa8.64□□□□□ -1.03
CKS1B-205ENST00000473344 PTPRCP08575 1304 aa8.63□□□□□ -1.03
CKS1B-205ENST00000473344 MYPNQ86TC9 1320 aa8.63□□□□□ -1.03
CKS1B-205ENST00000473344 OSBPP22059 807 aa8.63□□□□□ -1.03
CKS1B-205ENST00000473344 FCGRTP55899 365 aa8.63□□□□□ -1.03
CKS1B-205ENST00000473344 MTFR1Q15390 333 aa8.63□□□□□ -1.03
CKS1B-205ENST00000473344 ANKRD44Q8N8A2 993 aa8.63□□□□□ -1.03
CKS1B-205ENST00000473344 RNF208Q9H0X6 261 aa8.63□□□□□ -1.03
CKS1B-205ENST00000473344 GNL3LQ9NVN8 582 aaKnown RBP8.63□□□□□ -1.03
CKS1B-205ENST00000473344 PCDHGA4Q9Y5G9 962 aa8.63□□□□□ -1.03
CKS1B-205ENST00000473344 LDHBP07195 334 aaKnown RBP8.62□□□□□ -1.03
CKS1B-205ENST00000473344 CCL5P13501 91 aa8.62□□□□□ -1.03
CKS1B-205ENST00000473344 FGFR2P21802 821 aa8.62□□□□□ -1.03
CKS1B-205ENST00000473344 GJA8P48165 433 aa8.62□□□□□ -1.03
CKS1B-205ENST00000473344 CDC42EP5Q6NZY7 148 aa8.62□□□□□ -1.03
CKS1B-205ENST00000473344 ZSCAN29Q8IWY8 852 aaPredicted RBP8.62□□□□□ -1.03
CKS1B-205ENST00000473344 PICK1Q9NRD5 415 aa8.62□□□□□ -1.03
CKS1B-205ENST00000473344 USP40Q9NVE5 1235 aa8.62□□□□□ -1.03
CKS1B-205ENST00000473344 KCNH4Q9UQ05 1017 aa8.62□□□□□ -1.03
CKS1B-205ENST00000473344 CACNA1FO60840 1977 aa8.62□□□□□ -1.03
CKS1B-205ENST00000473344 EYA2O00167 538 aa8.61□□□□□ -1.03
CKS1B-205ENST00000473344 CXCL11O14625 94 aa8.61□□□□□ -1.03
CKS1B-205ENST00000473344 GJB1P08034 283 aa8.61□□□□□ -1.03
CKS1B-205ENST00000473344 NUDT7P0C024 238 aa8.61□□□□□ -1.03
CKS1B-205ENST00000473344 CYP2C8P10632 490 aa8.61□□□□□ -1.03
CKS1B-205ENST00000473344 CTGFP29279 349 aa8.61□□□□□ -1.03
CKS1B-205ENST00000473344 PRDX5P30044 214 aa8.61□□□□□ -1.03
CKS1B-205ENST00000473344 PRKCZQ05513 592 aa8.61□□□□□ -1.03
CKS1B-205ENST00000473344 NFIAQ12857 509 aa8.61□□□□□ -1.03
CKS1B-205ENST00000473344 DIXDC1Q155Q3 683 aa8.61□□□□□ -1.03
CKS1B-205ENST00000473344 NOL9Q5SY16 702 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms