RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 NBR1Q14596 966 aa17.2■□□□□ 0.34
HIF3A-206ENST00000472815 NLGN2Q8NFZ4 835 aa17.2■□□□□ 0.34
HIF3A-206ENST00000472815 ANGEL1Q9UNK9 670 aaKnown RBP17.2■□□□□ 0.34
HIF3A-206ENST00000472815 TTF2Q9UNY4 1162 aaKnown RBP17.2■□□□□ 0.34
HIF3A-206ENST00000472815 USP17L3A6NCW0 530 aa17.19■□□□□ 0.34
HIF3A-206ENST00000472815 USP17L4A6NCW7 530 aa17.19■□□□□ 0.34
HIF3A-206ENST00000472815 PFKFB2O60825 505 aa17.19■□□□□ 0.34
HIF3A-206ENST00000472815 PTMSP20962 102 aa17.19■□□□□ 0.34
HIF3A-206ENST00000472815 EVCP57679 992 aa17.19■□□□□ 0.34
HIF3A-206ENST00000472815 PDE4BQ07343 736 aa17.19■□□□□ 0.34
HIF3A-206ENST00000472815 COL9A3Q14050 684 aaPredicted RBP17.19■□□□□ 0.34
HIF3A-206ENST00000472815 AOC3Q16853 763 aa17.19■□□□□ 0.34
HIF3A-206ENST00000472815 DALRD3Q5D0E6 543 aaKnown RBP17.19■□□□□ 0.34
HIF3A-206ENST00000472815 CTR9Q6PD62 1173 aa17.19■□□□□ 0.34
HIF3A-206ENST00000472815 USP17L1Q7RTZ2 530 aa17.19■□□□□ 0.34
HIF3A-206ENST00000472815 LLPHQ9BRT6 129 aaKnown RBP17.19■□□□□ 0.34
HIF3A-206ENST00000472815 NAP1L2Q9ULW6 460 aaPredicted RBP17.19■□□□□ 0.34
HIF3A-206ENST00000472815 NEDD4P46934 1319 aa17.19■□□□□ 0.34
HIF3A-206ENST00000472815 WDR33Q9C0J8 1336 aaKnown RBP17.19■□□□□ 0.34
HIF3A-206ENST00000472815 USP17L12C9JPN9 530 aa17.18■□□□□ 0.34
HIF3A-206ENST00000472815 USP17L21D6R901 530 aa17.18■□□□□ 0.34
HIF3A-206ENST00000472815 GOLGA6L22H0YM25 854 aa17.18■□□□□ 0.34
HIF3A-206ENST00000472815 APOBRQ0VD83 1088 aa17.18■□□□□ 0.34
HIF3A-206ENST00000472815 STK3Q13188 491 aa17.18■□□□□ 0.34
HIF3A-206ENST00000472815 GRIK5Q16478 980 aa17.18■□□□□ 0.34
HIF3A-206ENST00000472815 CHST3Q7LGC8 479 aa17.18■□□□□ 0.34
HIF3A-206ENST00000472815 TEX11Q8IYF3 940 aa17.18■□□□□ 0.34
HIF3A-206ENST00000472815 TMTC2Q8N394 836 aa17.18■□□□□ 0.34
HIF3A-206ENST00000472815 NECAB1Q8N987 351 aa17.18■□□□□ 0.34
HIF3A-206ENST00000472815 SH3RF3Q8TEJ3 882 aaPredicted RBP17.18■□□□□ 0.34
HIF3A-206ENST00000472815 TNPO1Q92973 898 aaKnown RBP17.18■□□□□ 0.34
HIF3A-206ENST00000472815 TEKT1Q969V4 418 aa17.18■□□□□ 0.34
HIF3A-206ENST00000472815 ZNF287Q9HBT7 754 aa17.18■□□□□ 0.34
HIF3A-206ENST00000472815 MCM9Q9NXL9 1143 aa17.18■□□□□ 0.34
HIF3A-206ENST00000472815 KDM4AO75164 1064 aa17.18■□□□□ 0.34
HIF3A-206ENST00000472815 GJB2P29033 226 aa17.18■□□□□ 0.34
HIF3A-206ENST00000472815 RRP12Q5JTH9 1297 aaKnown RBP17.18■□□□□ 0.34
HIF3A-206ENST00000472815 HHIPL2Q6UWX4 724 aa17.18■□□□□ 0.34
HIF3A-206ENST00000472815 MRIQ9BWK5 157 aa17.18■□□□□ 0.34
HIF3A-206ENST00000472815 PSME4Q14997 1843 aa17.17■□□□□ 0.34
HIF3A-206ENST00000472815 CDK5RAP2Q96SN8 1893 aa17.17■□□□□ 0.34
HIF3A-206ENST00000472815 DDX11L8A8MPP1 907 aa17.17■□□□□ 0.34
HIF3A-206ENST00000472815 LIFRP42702 1097 aa17.17■□□□□ 0.34
HIF3A-206ENST00000472815 ANTXR2P58335 489 aa17.17■□□□□ 0.34
HIF3A-206ENST00000472815 HMGN5P82970 282 aaKnown RBP17.17■□□□□ 0.34
HIF3A-206ENST00000472815 HDLBPQ00341 1268 aaKnown RBP17.17■□□□□ 0.34
HIF3A-206ENST00000472815 SYNE3Q6ZMZ3 975 aa17.17■□□□□ 0.34
HIF3A-206ENST00000472815 UBAC1Q9BSL1 405 aa17.17■□□□□ 0.34
HIF3A-206ENST00000472815 FOCADQ5VW36 1801 aa17.17■□□□□ 0.34
HIF3A-206ENST00000472815 MYO3BQ8WXR4 1341 aa17.17■□□□□ 0.34
HIF3A-206ENST00000472815 KLF18A0A0U1RQI7 1052 aa17.16■□□□□ 0.34
HIF3A-206ENST00000472815 IFIT3O14879 490 aaKnown RBP17.16■□□□□ 0.34
HIF3A-206ENST00000472815 TMEM67Q5HYA8 995 aa17.16■□□□□ 0.34
HIF3A-206ENST00000472815 IQCA1Q86XH1 822 aa17.16■□□□□ 0.34
HIF3A-206ENST00000472815 LARGE2Q8N3Y3 721 aa17.16■□□□□ 0.34
HIF3A-206ENST00000472815 TGFBRAP1Q8WUH2 860 aa17.16■□□□□ 0.34
HIF3A-206ENST00000472815 ZSWIM5Q9P217 1185 aa17.16■□□□□ 0.34
HIF3A-206ENST00000472815 DAGLAQ9Y4D2 1042 aa17.16■□□□□ 0.34
HIF3A-206ENST00000472815 F8W031 263 aaPredicted RBP17.16■□□□□ 0.34
HIF3A-206ENST00000472815 SH2B2O14492 632 aaPredicted RBP17.16■□□□□ 0.34
HIF3A-206ENST00000472815 FGRP09769 529 aa17.16■□□□□ 0.34
HIF3A-206ENST00000472815 PDIA3P30101 505 aaKnown RBP17.16■□□□□ 0.34
HIF3A-206ENST00000472815 DACT2Q5SW24 774 aa17.16■□□□□ 0.34
HIF3A-206ENST00000472815 NFXL1Q6ZNB6 911 aa17.16■□□□□ 0.34
HIF3A-206ENST00000472815 CYB5R4Q7L1T6 521 aa17.16■□□□□ 0.34
HIF3A-206ENST00000472815 CERS5Q8N5B7 392 aa17.16■□□□□ 0.34
HIF3A-206ENST00000472815 ATP6V1DQ9Y5K8 247 aa17.16■□□□□ 0.34
HIF3A-206ENST00000472815 SCN9AQ15858 1988 aa17.15■□□□□ 0.34
HIF3A-206ENST00000472815 FER1L6Q2WGJ9 1857 aa17.15■□□□□ 0.34
HIF3A-206ENST00000472815 CCDC69A6NI79 296 aa17.15■□□□□ 0.34
HIF3A-206ENST00000472815 GOLGA8BA8MQT2 603 aa17.15■□□□□ 0.34
HIF3A-206ENST00000472815 ORC4O43929 436 aa17.15■□□□□ 0.34
HIF3A-206ENST00000472815 BRD1O95696 1058 aa17.15■□□□□ 0.34
HIF3A-206ENST00000472815 POLR3DP05423 398 aaPredicted RBP17.15■□□□□ 0.34
HIF3A-206ENST00000472815 SCRN1Q12765 414 aa17.15■□□□□ 0.34
HIF3A-206ENST00000472815 CPLX2Q6PUV4 134 aaKnown RBP17.15■□□□□ 0.34
HIF3A-206ENST00000472815 CLEC17AQ6ZS10 378 aa17.15■□□□□ 0.34
HIF3A-206ENST00000472815 SGMS1Q86VZ5 419 aa17.15■□□□□ 0.34
HIF3A-206ENST00000472815 MKRN1Q9UHC7 482 aaKnown RBP17.15■□□□□ 0.34
HIF3A-206ENST00000472815 MYH1P12882 1939 aa17.14■□□□□ 0.34
HIF3A-206ENST00000472815 ROBO3Q96MS0 1386 aa17.14■□□□□ 0.33
HIF3A-206ENST00000472815 STX6O43752 255 aa17.14■□□□□ 0.33
HIF3A-206ENST00000472815 WTAPQ15007 396 aa17.14■□□□□ 0.33
HIF3A-206ENST00000472815 C12orf60Q5U649 245 aa17.14■□□□□ 0.33
HIF3A-206ENST00000472815 FAM184AQ8NB25 1140 aa17.14■□□□□ 0.33
HIF3A-206ENST00000472815 ZNF646O15015 1829 aaPredicted RBP17.13■□□□□ 0.33
HIF3A-206ENST00000472815 CPLX1O14810 134 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 MCM4P33991 863 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 ST3GAL1Q11201 340 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 NIM1KQ8IY84 436 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 IGDCC4Q8TDY8 1250 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 BCS1LQ9Y276 419 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 SLC12A7Q9Y666 1083 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 ECM29Q5VYK3 1845 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 FLT1P17948 1338 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 RANBP6O60518 1105 aaKnown RBP17.13■□□□□ 0.33
HIF3A-206ENST00000472815 CDKL5O76039 1030 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 SYT1P21579 422 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 RCAN1P53805 252 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 RHBDL3P58872 404 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms