RNA–Protein interactions for RNA: ENST00000472419.1

VEPH1-207, Transcript of ventricular zone expressed PH domain containing 1, humanhuman

TSL 3

Gene VEPH1, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEPH1-207ENST00000472419 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.17□□□□□ -1.1
VEPH1-207ENST00000472419 MRPL18Q9H0U6 180 aaKnown RBP8.17□□□□□ -1.1
VEPH1-207ENST00000472419 BRMS1Q9HCU9 246 aa8.17□□□□□ -1.1
VEPH1-207ENST00000472419 GRIN3BO60391 1043 aa8.16□□□□□ -1.1
VEPH1-207ENST00000472419 ALX3O95076 343 aa8.16□□□□□ -1.1
VEPH1-207ENST00000472419 MCM4P33991 863 aa8.16□□□□□ -1.1
VEPH1-207ENST00000472419 CWF19L2Q2TBE0 894 aaKnown RBP8.16□□□□□ -1.1
VEPH1-207ENST00000472419 C12orf40Q86WS4 652 aa8.16□□□□□ -1.1
VEPH1-207ENST00000472419 MCF2L2Q86YR7 1114 aa8.16□□□□□ -1.1
VEPH1-207ENST00000472419 ELMO3Q96BJ8 720 aa8.16□□□□□ -1.1
VEPH1-207ENST00000472419 SCARF2Q96GP6 870 aaPredicted RBP8.16□□□□□ -1.1
VEPH1-207ENST00000472419 SPATA32Q96LK8 384 aa8.16□□□□□ -1.1
VEPH1-207ENST00000472419 PCDHGC5Q9Y5F6 944 aa8.16□□□□□ -1.1
VEPH1-207ENST00000472419 TMPRSS2O15393 492 aa8.15□□□□□ -1.1
VEPH1-207ENST00000472419 FGRP09769 529 aa8.15□□□□□ -1.1
VEPH1-207ENST00000472419 SLFN14P0C7P3 912 aa8.15□□□□□ -1.1
VEPH1-207ENST00000472419 SPATA31C1P0DKV0 1188 aa8.15□□□□□ -1.1
VEPH1-207ENST00000472419 HNRNPUQ00839 825 aaKnown RBP eCLIP8.15□□□□□ -1.1
VEPH1-207ENST00000472419 SEC16BQ96JE7 1060 aa8.15□□□□□ -1.1
VEPH1-207ENST00000472419 RNF208Q9H0X6 261 aa8.15□□□□□ -1.1
VEPH1-207ENST00000472419 USP21Q9UK80 565 aa8.15□□□□□ -1.1
VEPH1-207ENST00000472419 PPP1R9AQ9ULJ8 1098 aa8.15□□□□□ -1.1
VEPH1-207ENST00000472419 POLR3KQ9Y2Y1 108 aaPredicted RBP8.15□□□□□ -1.1
VEPH1-207ENST00000472419 MEGF11A6BM72 1044 aa8.14□□□□□ -1.11
VEPH1-207ENST00000472419 F8W735 103 aaPredicted RBP8.14□□□□□ -1.11
VEPH1-207ENST00000472419 GFRA2O00451 464 aa8.14□□□□□ -1.11
VEPH1-207ENST00000472419 ATP2B1P20020 1258 aa8.14□□□□□ -1.11
VEPH1-207ENST00000472419 SOX9P48436 509 aa8.14□□□□□ -1.11
VEPH1-207ENST00000472419 ZC3H12AQ5D1E8 599 aaKnown RBP8.14□□□□□ -1.11
VEPH1-207ENST00000472419 NUTM2GQ5VZR2 741 aa8.14□□□□□ -1.11
VEPH1-207ENST00000472419 CCDC81Q6ZN84 652 aa8.14□□□□□ -1.11
VEPH1-207ENST00000472419 GK5Q6ZS86 529 aa8.14□□□□□ -1.11
VEPH1-207ENST00000472419 HDXQ7Z353 690 aa8.14□□□□□ -1.11
VEPH1-207ENST00000472419 DHX38Q92620 1227 aaKnown RBP8.14□□□□□ -1.11
VEPH1-207ENST00000472419 SNCAIPQ9Y6H5 919 aa8.14□□□□□ -1.11
VEPH1-207ENST00000472419 PRAMEF27A3QJZ7 478 aa8.13□□□□□ -1.11
VEPH1-207ENST00000472419 DRD2P14416 443 aa8.13□□□□□ -1.11
VEPH1-207ENST00000472419 GTF2F1P35269 517 aaKnown RBP eCLIP8.13□□□□□ -1.11
VEPH1-207ENST00000472419 ID3Q02535 119 aa8.13□□□□□ -1.11
VEPH1-207ENST00000472419 CLCQ05315 142 aa8.13□□□□□ -1.11
VEPH1-207ENST00000472419 COL9A2Q14055 689 aaPredicted RBP8.13□□□□□ -1.11
VEPH1-207ENST00000472419 PPM1JQ5JR12 505 aa8.13□□□□□ -1.11
VEPH1-207ENST00000472419 CYP4F12Q9HCS2 524 aa8.13□□□□□ -1.11
VEPH1-207ENST00000472419 PPT2Q9UMR5 302 aa8.13□□□□□ -1.11
VEPH1-207ENST00000472419 AP4E1Q9UPM8 1137 aa8.13□□□□□ -1.11
VEPH1-207ENST00000472419 HIF3AQ9Y2N7 669 aa8.13□□□□□ -1.11
VEPH1-207ENST00000472419 CORINQ9Y5Q5 1042 aa8.13□□□□□ -1.11
VEPH1-207ENST00000472419 SSBP05455 408 aaKnown RBP eCLIP8.12□□□□□ -1.11
VEPH1-207ENST00000472419 ADH5P11766 374 aa8.12□□□□□ -1.11
VEPH1-207ENST00000472419 ZNF165P49910 485 aa8.12□□□□□ -1.11
VEPH1-207ENST00000472419 CYFIP1Q7L576 1253 aa8.12□□□□□ -1.11
VEPH1-207ENST00000472419 C12orf50Q8NA57 414 aaPredicted RBP8.12□□□□□ -1.11
VEPH1-207ENST00000472419 LENG1Q96BZ8 264 aaPredicted RBP8.12□□□□□ -1.11
VEPH1-207ENST00000472419 SUGCTQ9HAC7 445 aa8.12□□□□□ -1.11
VEPH1-207ENST00000472419 CRIM1Q9NZV1 1036 aa8.12□□□□□ -1.11
VEPH1-207ENST00000472419 PCDHB14Q9Y5E9 798 aa8.12□□□□□ -1.11
VEPH1-207ENST00000472419 MRVI1Q9Y6F6 885 aa8.12□□□□□ -1.11
VEPH1-207ENST00000472419 APBA3O96018 575 aa8.11□□□□□ -1.11
VEPH1-207ENST00000472419 SOX4Q06945 474 aaPredicted RBP8.11□□□□□ -1.11
VEPH1-207ENST00000472419 FBXW10Q5XX13 1052 aa8.11□□□□□ -1.11
VEPH1-207ENST00000472419 FDX2Q6P4F2 183 aa8.11□□□□□ -1.11
VEPH1-207ENST00000472419 TMEM130Q8N3G9 435 aa8.11□□□□□ -1.11
VEPH1-207ENST00000472419 SMG8Q8ND04 991 aaKnown RBP8.11□□□□□ -1.11
VEPH1-207ENST00000472419 FANCD2OSQ96PS1 177 aa8.11□□□□□ -1.11
VEPH1-207ENST00000472419 FERD3LQ96RJ6 166 aa8.11□□□□□ -1.11
VEPH1-207ENST00000472419 SRRTQ9BXP5 876 aaKnown RBP8.11□□□□□ -1.11
VEPH1-207ENST00000472419 AKTIPQ9H8T0 292 aa8.11□□□□□ -1.11
VEPH1-207ENST00000472419 PICK1Q9NRD5 415 aa8.11□□□□□ -1.11
VEPH1-207ENST00000472419 SYNGAP1Q96PV0 1343 aa8.1□□□□□ -1.11
VEPH1-207ENST00000472419 C9orf172C9J069 976 aa8.1□□□□□ -1.11
VEPH1-207ENST00000472419 IREB2P48200 963 aaKnown RBP8.1□□□□□ -1.11
VEPH1-207ENST00000472419 DYMQ7RTS9 669 aa8.1□□□□□ -1.11
VEPH1-207ENST00000472419 CPLX3Q8WVH0 158 aa8.1□□□□□ -1.11
VEPH1-207ENST00000472419 UBXN4Q92575 508 aa8.1□□□□□ -1.11
VEPH1-207ENST00000472419 NACC1Q96RE7 527 aa8.1□□□□□ -1.11
VEPH1-207ENST00000472419 DISC1Q9NRI5 854 aa8.1□□□□□ -1.11
VEPH1-207ENST00000472419 TIAF1O95411 115 aa8.09□□□□□ -1.11
VEPH1-207ENST00000472419 GLB1P16278 677 aa8.09□□□□□ -1.11
VEPH1-207ENST00000472419 PLCG1P19174 1290 aa8.09□□□□□ -1.11
VEPH1-207ENST00000472419 NOS3P29474 1203 aa8.09□□□□□ -1.11
VEPH1-207ENST00000472419 GRK4P32298 578 aa8.09□□□□□ -1.11
VEPH1-207ENST00000472419 PREPP48147 710 aa8.09□□□□□ -1.11
VEPH1-207ENST00000472419 ERVK-24P63145 666 aa8.09□□□□□ -1.11
VEPH1-207ENST00000472419 RING1Q06587 406 aa8.09□□□□□ -1.11
VEPH1-207ENST00000472419 TTLL4Q14679 1199 aa8.09□□□□□ -1.11
VEPH1-207ENST00000472419 REXO1Q8N1G1 1221 aaKnown RBP8.09□□□□□ -1.11
VEPH1-207ENST00000472419 WFDC12Q8WWY7 111 aa8.09□□□□□ -1.11
VEPH1-207ENST00000472419 ANAPC16Q96DE5 110 aa8.09□□□□□ -1.11
VEPH1-207ENST00000472419 DNAJC2Q99543 621 aaKnown RBP8.09□□□□□ -1.11
VEPH1-207ENST00000472419 STK10O94804 968 aaKnown RBP8.08□□□□□ -1.12
VEPH1-207ENST00000472419 HTR3BO95264 441 aa8.08□□□□□ -1.12
VEPH1-207ENST00000472419 PGRP06401 933 aa8.08□□□□□ -1.12
VEPH1-207ENST00000472419 HCLS1P14317 486 aaPredicted RBP8.08□□□□□ -1.12
VEPH1-207ENST00000472419 ETFBP38117 255 aa8.08□□□□□ -1.12
VEPH1-207ENST00000472419 ETF1P62495 437 aaKnown RBP8.08□□□□□ -1.12
VEPH1-207ENST00000472419 ANKRD34AQ69YU3 496 aa8.08□□□□□ -1.12
VEPH1-207ENST00000472419 C2CD4AQ8NCU7 369 aaPredicted RBP8.08□□□□□ -1.12
VEPH1-207ENST00000472419 ATXN3LQ9H3M9 355 aa8.08□□□□□ -1.12
VEPH1-207ENST00000472419 EHMT1Q9H9B1 1298 aa8.08□□□□□ -1.12
VEPH1-207ENST00000472419 ZNF408Q9H9D4 720 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms