RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 NOGQ13253 232 aa11.64□□□□□ -0.55
GGPS1-204ENST00000471812 OS9Q13438 667 aaPredicted RBP11.64□□□□□ -0.55
GGPS1-204ENST00000471812 HHIPL2Q6UWX4 724 aa11.64□□□□□ -0.55
GGPS1-204ENST00000471812 SH3BP5LQ7L8J4 393 aa11.64□□□□□ -0.55
GGPS1-204ENST00000471812 AIDAQ96BJ3 306 aa11.64□□□□□ -0.55
GGPS1-204ENST00000471812 DDX4Q9NQI0 724 aaKnown RBP11.64□□□□□ -0.55
GGPS1-204ENST00000471812 GAKO14976 1311 aa11.63□□□□□ -0.55
GGPS1-204ENST00000471812 ZSWIM8A7E2V4 1837 aa11.63□□□□□ -0.55
GGPS1-204ENST00000471812 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
GGPS1-204ENST00000471812 POTEMA6NI47 508 aa11.63□□□□□ -0.55
GGPS1-204ENST00000471812 MYO1BO43795 1136 aa11.63□□□□□ -0.55
GGPS1-204ENST00000471812 TRPA1O75762 1119 aa11.63□□□□□ -0.55
GGPS1-204ENST00000471812 CYP2E1P05181 493 aaPredicted RBP11.63□□□□□ -0.55
GGPS1-204ENST00000471812 FKBP1BP68106 108 aa11.63□□□□□ -0.55
GGPS1-204ENST00000471812 MAP3K11Q16584 847 aa11.63□□□□□ -0.55
GGPS1-204ENST00000471812 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.63□□□□□ -0.55
GGPS1-204ENST00000471812 ADGRA1Q86SQ6 560 aa11.63□□□□□ -0.55
GGPS1-204ENST00000471812 SPATA5Q8NB90 893 aa11.63□□□□□ -0.55
GGPS1-204ENST00000471812 ELP3Q9H9T3 547 aa11.63□□□□□ -0.55
GGPS1-204ENST00000471812 PIH1D3Q9NQM4 214 aaKnown RBP11.63□□□□□ -0.55
GGPS1-204ENST00000471812 GNL3LQ9NVN8 582 aaKnown RBP11.63□□□□□ -0.55
GGPS1-204ENST00000471812 WDR70Q9NW82 654 aa11.63□□□□□ -0.55
GGPS1-204ENST00000471812 RNF186Q9NXI6 227 aa11.63□□□□□ -0.55
GGPS1-204ENST00000471812 AKAP2Q9Y2D5 859 aa11.63□□□□□ -0.55
GGPS1-204ENST00000471812 FOCADQ5VW36 1801 aa11.63□□□□□ -0.55
GGPS1-204ENST00000471812 SEMA3EO15041 775 aa11.62□□□□□ -0.55
GGPS1-204ENST00000471812 SMARCA5O60264 1052 aaPredicted RBP11.62□□□□□ -0.55
GGPS1-204ENST00000471812 ZAP70P43403 619 aa11.62□□□□□ -0.55
GGPS1-204ENST00000471812 SPRYD7Q5W111 196 aa11.62□□□□□ -0.55
GGPS1-204ENST00000471812 MIGA2Q7L4E1 593 aa11.62□□□□□ -0.55
GGPS1-204ENST00000471812 TNS4Q8IZW8 715 aa11.62□□□□□ -0.55
GGPS1-204ENST00000471812 CCDC102AQ96A19 550 aa11.62□□□□□ -0.55
GGPS1-204ENST00000471812 WNK4Q96J92 1243 aa11.62□□□□□ -0.55
GGPS1-204ENST00000471812 MRIQ9BWK5 157 aa11.62□□□□□ -0.55
GGPS1-204ENST00000471812 ANTXR1Q9H6X2 564 aa11.62□□□□□ -0.55
GGPS1-204ENST00000471812 SCUBE2Q9NQ36 999 aa11.62□□□□□ -0.55
GGPS1-204ENST00000471812 USP40Q9NVE5 1235 aa11.62□□□□□ -0.55
GGPS1-204ENST00000471812 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.62□□□□□ -0.55
GGPS1-204ENST00000471812 SUGT1Q9Y2Z0 365 aa11.62□□□□□ -0.55
GGPS1-204ENST00000471812 ATRNL1Q5VV63 1379 aa11.62□□□□□ -0.55
GGPS1-204ENST00000471812 PDS5AQ29RF7 1337 aaKnown RBP11.61□□□□□ -0.55
GGPS1-204ENST00000471812 PHIPQ8WWQ0 1821 aa11.61□□□□□ -0.55
GGPS1-204ENST00000471812 WDHD1O75717 1129 aaPredicted RBP11.61□□□□□ -0.55
GGPS1-204ENST00000471812 CHGBP05060 677 aa11.61□□□□□ -0.55
GGPS1-204ENST00000471812 INPP5BP32019 993 aa11.61□□□□□ -0.55
GGPS1-204ENST00000471812 NF2P35240 595 aa11.61□□□□□ -0.55
GGPS1-204ENST00000471812 BTDP43251 543 aa11.61□□□□□ -0.55
GGPS1-204ENST00000471812 RHBDL3P58872 404 aa11.61□□□□□ -0.55
GGPS1-204ENST00000471812 CAP1Q01518 475 aa11.61□□□□□ -0.55
GGPS1-204ENST00000471812 VGLL4Q14135 290 aa11.61□□□□□ -0.55
GGPS1-204ENST00000471812 SLFNL1Q499Z3 407 aa11.61□□□□□ -0.55
GGPS1-204ENST00000471812 GORABQ5T7V8 394 aa11.61□□□□□ -0.55
GGPS1-204ENST00000471812 IFFO2Q5TF58 517 aa11.61□□□□□ -0.55
GGPS1-204ENST00000471812 ARMC9Q7Z3E5 817 aa11.61□□□□□ -0.55
GGPS1-204ENST00000471812 RHPN1Q8TCX5 695 aa11.61□□□□□ -0.55
GGPS1-204ENST00000471812 ZKSCAN4Q969J2 545 aaPredicted RBP11.61□□□□□ -0.55
GGPS1-204ENST00000471812 NSUN4Q96CB9 384 aaKnown RBP11.61□□□□□ -0.55
GGPS1-204ENST00000471812 EDC3Q96F86 508 aaKnown RBP11.61□□□□□ -0.55
GGPS1-204ENST00000471812 GPR108Q9NPR9 543 aa11.61□□□□□ -0.55
GGPS1-204ENST00000471812 PRDM10Q9NQV6 1147 aa11.61□□□□□ -0.55
GGPS1-204ENST00000471812 DDX19BQ9UMR2 479 aa11.61□□□□□ -0.55
GGPS1-204ENST00000471812 PPP2R3BQ9Y5P8 575 aa11.61□□□□□ -0.55
GGPS1-204ENST00000471812 MROH7-TTC4A0A0A0MT08 1334 aa11.6□□□□□ -0.55
GGPS1-204ENST00000471812 MAST3O60307 1309 aa11.6□□□□□ -0.55
GGPS1-204ENST00000471812 DDTLA6NHG4 134 aaPredicted RBP11.6□□□□□ -0.55
GGPS1-204ENST00000471812 FAM196BA6NMK8 535 aa11.6□□□□□ -0.55
GGPS1-204ENST00000471812 IGF2BP3O00425 579 aaKnown RBP eCLIP11.6□□□□□ -0.55
GGPS1-204ENST00000471812 TBC1D8O95759 1140 aa11.6□□□□□ -0.55
GGPS1-204ENST00000471812 RGS3P49796 1198 aa11.6□□□□□ -0.55
GGPS1-204ENST00000471812 TTC39AQ5SRH9 613 aa11.6□□□□□ -0.55
GGPS1-204ENST00000471812 AACSQ86V21 672 aa11.6□□□□□ -0.55
GGPS1-204ENST00000471812 DZIP1Q86YF9 867 aaKnown RBP11.6□□□□□ -0.55
GGPS1-204ENST00000471812 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.6□□□□□ -0.55
GGPS1-204ENST00000471812 PTPN18Q99952 460 aa11.6□□□□□ -0.55
GGPS1-204ENST00000471812 PCDHB15Q9Y5E8 787 aa11.6□□□□□ -0.55
GGPS1-204ENST00000471812 SNCAIPQ9Y6H5 919 aa11.6□□□□□ -0.55
GGPS1-204ENST00000471812 PTPRFP10586 1907 aa11.6□□□□□ -0.55
GGPS1-204ENST00000471812 ATAD5Q96QE3 1844 aa11.6□□□□□ -0.55
GGPS1-204ENST00000471812 SEC24BO95487 1268 aa11.59□□□□□ -0.55
GGPS1-204ENST00000471812 RRP1P56182 461 aaKnown RBP11.59□□□□□ -0.55
GGPS1-204ENST00000471812 DYNLL1P63167 89 aaKnown RBP11.59□□□□□ -0.55
GGPS1-204ENST00000471812 PICALMQ13492 652 aa11.59□□□□□ -0.55
GGPS1-204ENST00000471812 PDE3AQ14432 1141 aa11.59□□□□□ -0.55
GGPS1-204ENST00000471812 SUPT20HL1Q3ZLR7 823 aa11.59□□□□□ -0.55
GGPS1-204ENST00000471812 POTEGQ6S5H5 508 aa11.59□□□□□ -0.55
GGPS1-204ENST00000471812 ERICH6Q7L0X2 663 aa11.59□□□□□ -0.55
GGPS1-204ENST00000471812 CCDC84Q86UT8 332 aaPredicted RBP11.59□□□□□ -0.55
GGPS1-204ENST00000471812 FAM83AQ86UY5 434 aa11.59□□□□□ -0.55
GGPS1-204ENST00000471812 SLC10A4Q96EP9 437 aa11.59□□□□□ -0.55
GGPS1-204ENST00000471812 CRBNQ96SW2 442 aa11.59□□□□□ -0.55
GGPS1-204ENST00000471812 RAI14Q9P0K7 980 aa11.59□□□□□ -0.55
GGPS1-204ENST00000471812 MYH1P12882 1939 aa11.58□□□□□ -0.55
GGPS1-204ENST00000471812 RPAP1Q9BWH6 1393 aaPredicted RBP11.58□□□□□ -0.56
GGPS1-204ENST00000471812 DOCK1Q14185 1865 aa11.58□□□□□ -0.56
GGPS1-204ENST00000471812 GPR75-ASB3A0A0A6YYF3 556 aa11.58□□□□□ -0.56
GGPS1-204ENST00000471812 PPP1R12BO60237 982 aaPredicted RBP11.58□□□□□ -0.56
GGPS1-204ENST00000471812 TNFAIP1Q13829 316 aa11.58□□□□□ -0.56
GGPS1-204ENST00000471812 RRP1BQ14684 758 aaKnown RBP11.58□□□□□ -0.56
GGPS1-204ENST00000471812 SHROOM1Q2M3G4 852 aaPredicted RBP11.58□□□□□ -0.56
GGPS1-204ENST00000471812 FKBP1CQ5VVH2 108 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms