RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 TRERF1Q96PN7 1200 aa9.37□□□□□ -0.91
SMC5-202ENST00000471372 FEZ1Q99689 392 aa9.37□□□□□ -0.91
SMC5-202ENST00000471372 METTL14Q9HCE5 456 aaKnown RBP9.37□□□□□ -0.91
SMC5-202ENST00000471372 PTCH2Q9Y6C5 1203 aa9.37□□□□□ -0.91
SMC5-202ENST00000471372 UPK3BL1B0FP48 263 aa9.36□□□□□ -0.91
SMC5-202ENST00000471372 UPK3BL2E5RIL1 263 aa9.36□□□□□ -0.91
SMC5-202ENST00000471372 GUCY2CP25092 1073 aa9.36□□□□□ -0.91
SMC5-202ENST00000471372 CDC25BP30305 580 aa9.36□□□□□ -0.91
SMC5-202ENST00000471372 SCARA3Q6AZY7 606 aa9.36□□□□□ -0.91
SMC5-202ENST00000471372 GDF6Q6KF10 455 aaPredicted RBP9.36□□□□□ -0.91
SMC5-202ENST00000471372 CACNA2D2Q9NY47 1150 aa9.36□□□□□ -0.91
SMC5-202ENST00000471372 KLF15Q9UIH9 416 aa9.36□□□□□ -0.91
SMC5-202ENST00000471372 ZMYM5Q9UJ78 669 aa9.36□□□□□ -0.91
SMC5-202ENST00000471372 PCDHA4Q9UN74 947 aa9.36□□□□□ -0.91
SMC5-202ENST00000471372 CORINQ9Y5Q5 1042 aa9.36□□□□□ -0.91
SMC5-202ENST00000471372 MEIS3P2A8K0S8 358 aa9.35□□□□□ -0.91
SMC5-202ENST00000471372 GFRA2O00451 464 aa9.35□□□□□ -0.91
SMC5-202ENST00000471372 HTR3BO95264 441 aa9.35□□□□□ -0.91
SMC5-202ENST00000471372 BMP4P12644 408 aa9.35□□□□□ -0.91
SMC5-202ENST00000471372 CDC27P30260 824 aa9.35□□□□□ -0.91
SMC5-202ENST00000471372 ADH7P40394 386 aa9.35□□□□□ -0.91
SMC5-202ENST00000471372 MASP1P48740 699 aa9.35□□□□□ -0.91
SMC5-202ENST00000471372 SSRP1Q08945 709 aaKnown RBP9.35□□□□□ -0.91
SMC5-202ENST00000471372 AP3B2Q13367 1082 aa9.35□□□□□ -0.91
SMC5-202ENST00000471372 GPBAR1Q8TDU6 330 aa9.35□□□□□ -0.91
SMC5-202ENST00000471372 TM9SF2Q99805 663 aa9.35□□□□□ -0.91
SMC5-202ENST00000471372 ERBB4Q15303 1308 aa9.34□□□□□ -0.91
SMC5-202ENST00000471372 CDC14CA4D256 554 aa9.34□□□□□ -0.91
SMC5-202ENST00000471372 ECEL1O95672 775 aa9.34□□□□□ -0.91
SMC5-202ENST00000471372 INPP5AQ14642 412 aa9.34□□□□□ -0.91
SMC5-202ENST00000471372 ZYXQ15942 572 aaKnown RBP9.34□□□□□ -0.91
SMC5-202ENST00000471372 WIPI1Q5MNZ9 446 aaPredicted RBP9.34□□□□□ -0.91
SMC5-202ENST00000471372 ZSCAN1Q8NBB4 408 aa9.34□□□□□ -0.91
SMC5-202ENST00000471372 ST13P5Q8NFI4 369 aaPredicted RBP9.34□□□□□ -0.91
SMC5-202ENST00000471372 DDX54Q8TDD1 881 aaKnown RBP9.34□□□□□ -0.91
SMC5-202ENST00000471372 TMEM40Q8WWA1 233 aa9.34□□□□□ -0.91
SMC5-202ENST00000471372 PRR36Q9H6K5 1346 aa9.33□□□□□ -0.92
SMC5-202ENST00000471372 FAM177BA6PVY3 158 aa9.33□□□□□ -0.92
SMC5-202ENST00000471372 H3BRJ5 948 aa9.33□□□□□ -0.92
SMC5-202ENST00000471372 ASMTLO95671 621 aa9.33□□□□□ -0.92
SMC5-202ENST00000471372 CABP4P57796 275 aa9.33□□□□□ -0.92
SMC5-202ENST00000471372 GSTM4Q03013 218 aa9.33□□□□□ -0.92
SMC5-202ENST00000471372 LRRFIP1Q32MZ4 808 aaKnown RBP9.33□□□□□ -0.92
SMC5-202ENST00000471372 FOXR1Q6PIV2 292 aa9.33□□□□□ -0.92
SMC5-202ENST00000471372 LRFN4Q6PJG9 635 aa9.33□□□□□ -0.92
SMC5-202ENST00000471372 VWA5B2Q8N398 1253 aa9.33□□□□□ -0.92
SMC5-202ENST00000471372 STAG1Q8WVM7 1258 aa9.33□□□□□ -0.92
SMC5-202ENST00000471372 PLPPR2Q96GM1 343 aa9.33□□□□□ -0.92
SMC5-202ENST00000471372 ACSBG1Q96GR2 724 aa9.33□□□□□ -0.92
SMC5-202ENST00000471372 FRRS1LQ9P0K9 344 aa9.33□□□□□ -0.92
SMC5-202ENST00000471372 DNAJA2O60884 412 aa9.32□□□□□ -0.92
SMC5-202ENST00000471372 ACRP10323 421 aa9.32□□□□□ -0.92
SMC5-202ENST00000471372 PLEKHG6Q3KR16 790 aa9.32□□□□□ -0.92
SMC5-202ENST00000471372 OVOS1Q6IE37 1185 aa9.32□□□□□ -0.92
SMC5-202ENST00000471372 PSAPL1Q6NUJ1 521 aa9.32□□□□□ -0.92
SMC5-202ENST00000471372 SLC7A3Q8WY07 619 aa9.32□□□□□ -0.92
SMC5-202ENST00000471372 TMX1Q9H3N1 280 aa9.32□□□□□ -0.92
SMC5-202ENST00000471372 DDX56Q9NY93 547 aaKnown RBP9.32□□□□□ -0.92
SMC5-202ENST00000471372 REV1Q9UBZ9 1251 aa9.32□□□□□ -0.92
SMC5-202ENST00000471372 CD2APQ9Y5K6 639 aa9.32□□□□□ -0.92
SMC5-202ENST00000471372 LTBP3Q9NS15 1303 aa9.31□□□□□ -0.92
SMC5-202ENST00000471372 PARNO95453 639 aaKnown RBP9.31□□□□□ -0.92
SMC5-202ENST00000471372 HCLS1P14317 486 aaPredicted RBP9.31□□□□□ -0.92
SMC5-202ENST00000471372 TCEA2Q15560 299 aa9.31□□□□□ -0.92
SMC5-202ENST00000471372 C21orf62-AS1Q17RA5 79 aa9.31□□□□□ -0.92
SMC5-202ENST00000471372 DALRD3Q5D0E6 543 aaKnown RBP9.31□□□□□ -0.92
SMC5-202ENST00000471372 TXNDC11Q6PKC3 985 aa9.31□□□□□ -0.92
SMC5-202ENST00000471372 UNC5AQ6ZN44 842 aa9.31□□□□□ -0.92
SMC5-202ENST00000471372 MDFIQ99750 246 aa9.31□□□□□ -0.92
SMC5-202ENST00000471372 AVENQ9NQS1 362 aaPredicted RBP9.31□□□□□ -0.92
SMC5-202ENST00000471372 PCDHB10Q9UN67 800 aa9.31□□□□□ -0.92
SMC5-202ENST00000471372 ADARB2-AS1A8MUL3 147 aa9.3□□□□□ -0.92
SMC5-202ENST00000471372 FAM153BP0C7A2 387 aa9.3□□□□□ -0.92
SMC5-202ENST00000471372 TAF7LQ5H9L4 462 aa9.3□□□□□ -0.92
SMC5-202ENST00000471372 VHLLQ6RSH7 139 aa9.3□□□□□ -0.92
SMC5-202ENST00000471372 TAB3Q8N5C8 712 aaPredicted RBP9.3□□□□□ -0.92
SMC5-202ENST00000471372 ATG4CQ96DT6 458 aa9.3□□□□□ -0.92
SMC5-202ENST00000471372 NRSN2Q9GZP1 204 aa9.3□□□□□ -0.92
SMC5-202ENST00000471372 IRF2BPLQ9H1B7 796 aa9.3□□□□□ -0.92
SMC5-202ENST00000471372 CCDC86Q9H6F5 360 aaKnown RBP9.3□□□□□ -0.92
SMC5-202ENST00000471372 SOX17Q9H6I2 414 aaPredicted RBP9.3□□□□□ -0.92
SMC5-202ENST00000471372 GMIPQ9P107 970 aa9.3□□□□□ -0.92
SMC5-202ENST00000471372 FAM86C2PA6NEL3 165 aa9.29□□□□□ -0.92
SMC5-202ENST00000471372 SLC22A31A6NKX4 558 aa9.29□□□□□ -0.92
SMC5-202ENST00000471372 NME1P15531 152 aaKnown RBP9.29□□□□□ -0.92
SMC5-202ENST00000471372 PLCG1P19174 1290 aa9.29□□□□□ -0.92
SMC5-202ENST00000471372 LORP23490 312 aaPredicted RBP9.29□□□□□ -0.92
SMC5-202ENST00000471372 EEPD1Q7L9B9 569 aa9.29□□□□□ -0.92
SMC5-202ENST00000471372 FCHSD1Q86WN1 690 aa9.29□□□□□ -0.92
SMC5-202ENST00000471372 NUDT8Q8WV74 236 aa9.29□□□□□ -0.92
SMC5-202ENST00000471372 ZNF669Q96BR6 464 aaPredicted RBP9.29□□□□□ -0.92
SMC5-202ENST00000471372 SNCAIPQ9Y6H5 919 aa9.29□□□□□ -0.92
SMC5-202ENST00000471372 PPFIA3O75145 1194 aa9.28□□□□□ -0.92
SMC5-202ENST00000471372 CTSBP07858 339 aa9.28□□□□□ -0.92
SMC5-202ENST00000471372 NLRC3Q7RTR2 1065 aa9.28□□□□□ -0.92
SMC5-202ENST00000471372 IL22RA1Q8N6P7 574 aa9.28□□□□□ -0.92
SMC5-202ENST00000471372 TTC9Q92623 222 aa9.28□□□□□ -0.92
SMC5-202ENST00000471372 SLC9A7Q96T83 725 aa9.28□□□□□ -0.92
SMC5-202ENST00000471372 CORO1BQ9BR76 489 aa9.28□□□□□ -0.92
SMC5-202ENST00000471372 ZNF862O60290 1169 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms