RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 RTCBQ9Y3I0 505 aaKnown RBP5.97□□□□□ -1.45
SF3B1-208ENST00000470268 DNMT3AQ9Y6K1 912 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-208ENST00000470268 MAP3K15Q6ZN16 1313 aa5.97□□□□□ -1.45
SF3B1-208ENST00000470268 RGPD3A6NKT7 1758 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-208ENST00000470268 RGPD4Q7Z3J3 1758 aa5.97□□□□□ -1.45
SF3B1-208ENST00000470268 CARNS1A5YM72 827 aa5.96□□□□□ -1.45
SF3B1-208ENST00000470268 DDX58O95786 925 aaKnown RBP5.96□□□□□ -1.45
SF3B1-208ENST00000470268 MYCP01106 439 aaPredicted RBP5.96□□□□□ -1.45
SF3B1-208ENST00000470268 MARSP56192 900 aaKnown RBP5.96□□□□□ -1.45
SF3B1-208ENST00000470268 ERVK-9P63128 1117 aa5.96□□□□□ -1.45
SF3B1-208ENST00000470268 DPYDQ12882 1025 aa5.96□□□□□ -1.45
SF3B1-208ENST00000470268 MVPQ14764 893 aaKnown RBP5.96□□□□□ -1.45
SF3B1-208ENST00000470268 SLC15A2Q16348 729 aa5.96□□□□□ -1.45
SF3B1-208ENST00000470268 SWI5Q1ZZU3 235 aa5.96□□□□□ -1.45
SF3B1-208ENST00000470268 B4GALNT3Q6L9W6 998 aa5.96□□□□□ -1.45
SF3B1-208ENST00000470268 ITPRIPQ8IWB1 547 aa5.96□□□□□ -1.45
SF3B1-208ENST00000470268 ZNF594Q96JF6 807 aaPredicted RBP5.96□□□□□ -1.45
SF3B1-208ENST00000470268 MYD88Q99836 296 aa5.96□□□□□ -1.45
SF3B1-208ENST00000470268 METTL22Q9BUU2 404 aaPredicted RBP5.96□□□□□ -1.45
SF3B1-208ENST00000470268 PDGFDQ9GZP0 370 aaPredicted RBP5.96□□□□□ -1.45
SF3B1-208ENST00000470268 TFCP2L1Q9NZI6 479 aa5.96□□□□□ -1.45
SF3B1-208ENST00000470268 ERVV-1B6SEH8 477 aa5.96□□□□□ -1.46
SF3B1-208ENST00000470268 ARHGEF15O94989 841 aa5.96□□□□□ -1.46
SF3B1-208ENST00000470268 ITGA6P23229 1130 aa5.96□□□□□ -1.46
SF3B1-208ENST00000470268 SSFA2P28290 1259 aa5.96□□□□□ -1.46
SF3B1-208ENST00000470268 RAB15P59190 212 aa5.96□□□□□ -1.46
SF3B1-208ENST00000470268 TRAPPC3LQ5T215 181 aa5.96□□□□□ -1.46
SF3B1-208ENST00000470268 USPL1Q5W0Q7 1092 aa5.96□□□□□ -1.46
SF3B1-208ENST00000470268 COL23A1Q86Y22 540 aaPredicted RBP5.96□□□□□ -1.46
SF3B1-208ENST00000470268 CLP1Q92989 425 aaKnown RBP5.96□□□□□ -1.46
SF3B1-208ENST00000470268 SCARF2Q96GP6 870 aaPredicted RBP5.96□□□□□ -1.46
SF3B1-208ENST00000470268 MEIS3Q99687 375 aa5.96□□□□□ -1.46
SF3B1-208ENST00000470268 NARFQ9UHQ1 456 aa5.96□□□□□ -1.46
SF3B1-208ENST00000470268 KIAA1024Q9UPX6 916 aa5.96□□□□□ -1.46
SF3B1-208ENST00000470268 UBN2Q6ZU65 1347 aa5.96□□□□□ -1.46
SF3B1-208ENST00000470268 PNPLA7Q6ZV29 1317 aa5.96□□□□□ -1.46
SF3B1-208ENST00000470268 USP42Q9H9J4 1324 aaKnown RBP5.96□□□□□ -1.46
SF3B1-208ENST00000470268 ATP10DQ9P241 1426 aa5.95□□□□□ -1.46
SF3B1-208ENST00000470268 NEURL1BA8MQ27 555 aa5.95□□□□□ -1.46
SF3B1-208ENST00000470268 NBPF7P0C2Y1 421 aaPredicted RBP5.95□□□□□ -1.46
SF3B1-208ENST00000470268 TCIRG1Q13488 830 aa5.95□□□□□ -1.46
SF3B1-208ENST00000470268 CCDC102BQ68D86 513 aa5.95□□□□□ -1.46
SF3B1-208ENST00000470268 CC2D2BQ6DHV5 1058 aa5.95□□□□□ -1.46
SF3B1-208ENST00000470268 KIF6Q6ZMV9 814 aa5.95□□□□□ -1.46
SF3B1-208ENST00000470268 LINS1Q8NG48 757 aa5.95□□□□□ -1.46
SF3B1-208ENST00000470268 ISCA1Q9BUE6 129 aa5.95□□□□□ -1.46
SF3B1-208ENST00000470268 SRCIN1Q9C0H9 1055 aa5.95□□□□□ -1.46
SF3B1-208ENST00000470268 USP44Q9H0E7 712 aa5.95□□□□□ -1.46
SF3B1-208ENST00000470268 RBM19Q9Y4C8 960 aaKnown RBP5.95□□□□□ -1.46
SF3B1-208ENST00000470268 PXDNLA1KZ92 1463 aa5.95□□□□□ -1.46
SF3B1-208ENST00000470268 NUP188Q5SRE5 1749 aa5.95□□□□□ -1.46
SF3B1-208ENST00000470268 GYS1P13807 737 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 GPTP24298 496 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 RFC4P35249 363 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 CCT4P50991 539 aaKnown RBP5.94□□□□□ -1.46
SF3B1-208ENST00000470268 SEC13P55735 322 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 CBLBQ13191 982 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 GCKRQ14397 625 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 TBC1D9BQ66K14 1250 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 NPM2Q86SE8 214 aaKnown RBP5.94□□□□□ -1.46
SF3B1-208ENST00000470268 ZNF34Q8IZ26 560 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 VWA5B2Q8N398 1253 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 JARID2Q92833 1246 aaPredicted RBP5.94□□□□□ -1.46
SF3B1-208ENST00000470268 ZBTB40Q9NUA8 1239 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 UBR3Q6ZT12 1888 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 A0A087WZG4 1122 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 ALDH1L1O75891 902 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 SCTRP47872 440 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 CASP7P55210 303 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 TRIM28Q13263 835 aaKnown RBP5.94□□□□□ -1.46
SF3B1-208ENST00000470268 CLEC4GQ6UXB4 293 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 NLRP10Q86W26 655 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 SYNE4Q8N205 404 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 TPCN2Q8NHX9 752 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 KAZALD1Q96I82 304 aa5.94□□□□□ -1.46
SF3B1-208ENST00000470268 ARFGEF2Q9Y6D5 1785 aa5.93□□□□□ -1.46
SF3B1-208ENST00000470268 C4AP0C0L4 1744 aa5.93□□□□□ -1.46
SF3B1-208ENST00000470268 M0R2N6 131 aa5.93□□□□□ -1.46
SF3B1-208ENST00000470268 NEXNQ0ZGT2 675 aa5.93□□□□□ -1.46
SF3B1-208ENST00000470268 RNFT1Q5M7Z0 435 aa5.93□□□□□ -1.46
SF3B1-208ENST00000470268 SUSD4Q5VX71 490 aa5.93□□□□□ -1.46
SF3B1-208ENST00000470268 BICDL1Q6ZP65 573 aa5.93□□□□□ -1.46
SF3B1-208ENST00000470268 CCDC191Q8NCU4 936 aa5.93□□□□□ -1.46
SF3B1-208ENST00000470268 STK32BQ9NY57 414 aa5.93□□□□□ -1.46
SF3B1-208ENST00000470268 DDX19BQ9UMR2 479 aa5.93□□□□□ -1.46
SF3B1-208ENST00000470268 NIP7Q9Y221 180 aaKnown RBP eCLIP5.93□□□□□ -1.46
SF3B1-208ENST00000470268 CACNA1FO60840 1977 aa5.93□□□□□ -1.46
SF3B1-208ENST00000470268 UTYO14607 1347 aa5.93□□□□□ -1.46
SF3B1-208ENST00000470268 TUBGCP6Q96RT7 1819 aa5.93□□□□□ -1.46
SF3B1-208ENST00000470268 GRM8O00222 908 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 EIF5BO60841 1220 aaKnown RBP5.92□□□□□ -1.46
SF3B1-208ENST00000470268 IRS1P35568 1242 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 NFIXQ14938 502 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 FAM89AQ96GI7 184 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 OSBPL3Q9H4L5 887 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 TMPRSS4Q9NRS4 437 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 CWC25Q9NXE8 425 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-208ENST00000470268 SCN7AQ01118 1682 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 BCORQ6W2J9 1755 aa5.92□□□□□ -1.46
SF3B1-208ENST00000470268 IBTKQ9P2D0 1353 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms