RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 TEPSINQ96N21 525 aa12.69□□□□□ -0.38
SMC1A-206ENST00000470241 CRNKL1Q9BZJ0 848 aaKnown RBP12.69□□□□□ -0.38
SMC1A-206ENST00000470241 TMEM39BQ9GZU3 492 aa12.69□□□□□ -0.38
SMC1A-206ENST00000470241 IL25Q9H293 177 aa12.69□□□□□ -0.38
SMC1A-206ENST00000470241 MKRN1Q9UHC7 482 aaKnown RBP12.69□□□□□ -0.38
SMC1A-206ENST00000470241 PPP2R3BQ9Y5P8 575 aa12.69□□□□□ -0.38
SMC1A-206ENST00000470241 SLC4A4Q9Y6R1 1079 aa12.69□□□□□ -0.38
SMC1A-206ENST00000470241 FLT1P17948 1338 aa12.68□□□□□ -0.38
SMC1A-206ENST00000470241 USP5P45974 858 aa12.68□□□□□ -0.38
SMC1A-206ENST00000470241 FSTL1Q12841 308 aa12.68□□□□□ -0.38
SMC1A-206ENST00000470241 CDCA5Q96FF9 252 aa12.68□□□□□ -0.38
SMC1A-206ENST00000470241 OSBPL5Q9H0X9 879 aaPredicted RBP12.68□□□□□ -0.38
SMC1A-206ENST00000470241 CCDC171Q6TFL3 1326 aa12.67□□□□□ -0.38
SMC1A-206ENST00000470241 PASKQ96RG2 1323 aa12.67□□□□□ -0.38
SMC1A-206ENST00000470241 DDTLA6NHG4 134 aaPredicted RBP12.67□□□□□ -0.38
SMC1A-206ENST00000470241 GSG1L2A8MUP6 293 aa12.67□□□□□ -0.38
SMC1A-206ENST00000470241 FOXP2O15409 715 aa12.67□□□□□ -0.38
SMC1A-206ENST00000470241 CDC45O75419 566 aa12.67□□□□□ -0.38
SMC1A-206ENST00000470241 NBPF12Q5TAG4 269 aaPredicted RBP12.67□□□□□ -0.38
SMC1A-206ENST00000470241 VPS53Q5VIR6 699 aa12.67□□□□□ -0.38
SMC1A-206ENST00000470241 DCP1AQ9NPI6 582 aaPredicted RBP12.67□□□□□ -0.38
SMC1A-206ENST00000470241 ATP8A2Q9NTI2 1148 aa12.67□□□□□ -0.38
SMC1A-206ENST00000470241 ATRNL1Q5VV63 1379 aa12.67□□□□□ -0.38
SMC1A-206ENST00000470241 RPAP1Q9BWH6 1393 aaPredicted RBP12.67□□□□□ -0.38
SMC1A-206ENST00000470241 RAD50Q92878 1312 aa12.66□□□□□ -0.38
SMC1A-206ENST00000470241 SGSM2O43147 1006 aa12.66□□□□□ -0.38
SMC1A-206ENST00000470241 GNAT2P19087 354 aa12.66□□□□□ -0.38
SMC1A-206ENST00000470241 EPB41L4AQ9HCS5 686 aaPredicted RBP12.66□□□□□ -0.38
SMC1A-206ENST00000470241 SAP30BPQ9UHR5 308 aaKnown RBP12.66□□□□□ -0.38
SMC1A-206ENST00000470241 MYH7P12883 1935 aa12.66□□□□□ -0.38
SMC1A-206ENST00000470241 COL2A1P02458 1487 aaPredicted RBP12.65□□□□□ -0.38
SMC1A-206ENST00000470241 SSC5DA1L4H1 1573 aa12.65□□□□□ -0.38
SMC1A-206ENST00000470241 ECM29Q5VYK3 1845 aa12.65□□□□□ -0.38
SMC1A-206ENST00000470241 PATL2C9JE40 543 aaKnown RBP12.65□□□□□ -0.38
SMC1A-206ENST00000470241 GIMAP6Q6P9H5 292 aa12.65□□□□□ -0.38
SMC1A-206ENST00000470241 IFNL3Q8IZI9 196 aa12.65□□□□□ -0.38
SMC1A-206ENST00000470241 RUFY2Q8WXA3 655 aa12.65□□□□□ -0.38
SMC1A-206ENST00000470241 ESYT1Q9BSJ8 1104 aa12.65□□□□□ -0.38
SMC1A-206ENST00000470241 PALD1Q9ULE6 856 aa12.65□□□□□ -0.38
SMC1A-206ENST00000470241 SLURP2P0DP57 97 aa12.64□□□□□ -0.39
SMC1A-206ENST00000470241 CYP2D6P10635 497 aa12.64□□□□□ -0.39
SMC1A-206ENST00000470241 HSPD1P10809 573 aaKnown RBP12.64□□□□□ -0.39
SMC1A-206ENST00000470241 MFAP1P55081 439 aaKnown RBP12.64□□□□□ -0.39
SMC1A-206ENST00000470241 EVX2Q03828 476 aa12.64□□□□□ -0.39
SMC1A-206ENST00000470241 SLC4A8Q2Y0W8 1093 aa12.64□□□□□ -0.39
SMC1A-206ENST00000470241 SUPT20HL1Q3ZLR7 823 aa12.64□□□□□ -0.39
SMC1A-206ENST00000470241 CST9Q5W186 159 aa12.64□□□□□ -0.39
SMC1A-206ENST00000470241 ZSCAN29Q8IWY8 852 aaPredicted RBP12.64□□□□□ -0.39
SMC1A-206ENST00000470241 CSRNP1Q96S65 589 aa12.64□□□□□ -0.39
SMC1A-206ENST00000470241 DHX36Q9H2U1 1008 aaKnown RBP12.64□□□□□ -0.39
SMC1A-206ENST00000470241 MCM9Q9NXL9 1143 aa12.64□□□□□ -0.39
SMC1A-206ENST00000470241 CYP2D7A0A087X1C5 515 aa12.63□□□□□ -0.39
SMC1A-206ENST00000470241 USP17L12C9JPN9 530 aa12.63□□□□□ -0.39
SMC1A-206ENST00000470241 USP17L21D6R901 530 aa12.63□□□□□ -0.39
SMC1A-206ENST00000470241 SMIM22K7EJ46 135 aa12.63□□□□□ -0.39
SMC1A-206ENST00000470241 CELF2O95319 508 aaKnown RBP12.63□□□□□ -0.39
SMC1A-206ENST00000470241 APPP05067 770 aa12.63□□□□□ -0.39
SMC1A-206ENST00000470241 PLCD1P51178 756 aa12.63□□□□□ -0.39
SMC1A-206ENST00000470241 MAP3K10Q02779 954 aa12.63□□□□□ -0.39
SMC1A-206ENST00000470241 ALX1Q15699 326 aa12.63□□□□□ -0.39
SMC1A-206ENST00000470241 CTR9Q6PD62 1173 aa12.63□□□□□ -0.39
SMC1A-206ENST00000470241 NACAP1Q9BZK3 213 aa12.63□□□□□ -0.39
SMC1A-206ENST00000470241 ZNF408Q9H9D4 720 aa12.63□□□□□ -0.39
SMC1A-206ENST00000470241 FZD1Q9UP38 647 aa12.63□□□□□ -0.39
SMC1A-206ENST00000470241 FGAP02671 866 aa12.62□□□□□ -0.39
SMC1A-206ENST00000470241 POLR3DP05423 398 aaPredicted RBP12.62□□□□□ -0.39
SMC1A-206ENST00000470241 TDO2P48775 406 aa12.62□□□□□ -0.39
SMC1A-206ENST00000470241 PTH1RQ03431 593 aa12.62□□□□□ -0.39
SMC1A-206ENST00000470241 SBK1Q52WX2 424 aa12.62□□□□□ -0.39
SMC1A-206ENST00000470241 C12orf60Q5U649 245 aa12.62□□□□□ -0.39
SMC1A-206ENST00000470241 CASC1Q6TDU7 716 aa12.62□□□□□ -0.39
SMC1A-206ENST00000470241 MIGA2Q7L4E1 593 aa12.62□□□□□ -0.39
SMC1A-206ENST00000470241 TTC6Q86TZ1 520 aa12.62□□□□□ -0.39
SMC1A-206ENST00000470241 METTL16Q86W50 562 aaKnown RBP12.62□□□□□ -0.39
SMC1A-206ENST00000470241 DDRGK1Q96HY6 314 aa12.62□□□□□ -0.39
SMC1A-206ENST00000470241 DSCC1Q9BVC3 393 aa12.62□□□□□ -0.39
SMC1A-206ENST00000470241 PI4KBQ9UBF8 816 aa12.62□□□□□ -0.39
SMC1A-206ENST00000470241 ARPP21Q9UBL0 812 aaPredicted RBP12.62□□□□□ -0.39
SMC1A-206ENST00000470241 AK9Q5TCS8 1911 aa12.61□□□□□ -0.39
SMC1A-206ENST00000470241 TBC1D12O60347 775 aa12.61□□□□□ -0.39
SMC1A-206ENST00000470241 USP2O75604 605 aaPredicted RBP12.61□□□□□ -0.39
SMC1A-206ENST00000470241 HLA-DOAP06340 250 aa12.61□□□□□ -0.39
SMC1A-206ENST00000470241 NF2P35240 595 aa12.61□□□□□ -0.39
SMC1A-206ENST00000470241 GABPAQ06546 454 aa12.61□□□□□ -0.39
SMC1A-206ENST00000470241 PRKG1Q13976 671 aa12.61□□□□□ -0.39
SMC1A-206ENST00000470241 MOB2Q70IA6 237 aa12.61□□□□□ -0.39
SMC1A-206ENST00000470241 FOXP4Q8IVH2 680 aaPredicted RBP12.61□□□□□ -0.39
SMC1A-206ENST00000470241 HOOK2Q96ED9 719 aa12.61□□□□□ -0.39
SMC1A-206ENST00000470241 LSG1Q9H089 658 aaKnown RBP12.61□□□□□ -0.39
SMC1A-206ENST00000470241 NAPBQ9H115 298 aa12.61□□□□□ -0.39
SMC1A-206ENST00000470241 EHD4Q9H223 541 aa12.61□□□□□ -0.39
SMC1A-206ENST00000470241 DNAJC18Q9H819 358 aa12.61□□□□□ -0.39
SMC1A-206ENST00000470241 GBA2Q9HCG7 927 aaPredicted RBP12.61□□□□□ -0.39
SMC1A-206ENST00000470241 DDX60LQ5H9U9 1706 aaKnown RBP12.61□□□□□ -0.39
SMC1A-206ENST00000470241 ZMYM6O95789 1325 aa12.61□□□□□ -0.39
SMC1A-206ENST00000470241 POLR2AP24928 1970 aaKnown RBP12.6□□□□□ -0.39
SMC1A-206ENST00000470241 CDK5RAP2Q96SN8 1893 aa12.6□□□□□ -0.39
SMC1A-206ENST00000470241 FAM196BA6NMK8 535 aa12.6□□□□□ -0.39
SMC1A-206ENST00000470241 MINDY4BA8MYZ0 360 aa12.6□□□□□ -0.39
SMC1A-206ENST00000470241 MAP3K11Q16584 847 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms