RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 RBM17Q96I25 401 aaKnown RBP5.93□□□□□ -1.46
COL3A1-205ENST00000470167 PURBQ96QR8 312 aaKnown RBP5.93□□□□□ -1.46
COL3A1-205ENST00000470167 SLC39A3Q9BRY0 314 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 MKNK1Q9BUB5 465 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 DIAPH3Q9NSV4 1193 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 SPATS2LQ9NUQ6 558 aaKnown RBP5.93□□□□□ -1.46
COL3A1-205ENST00000470167 FAM53CQ9NYF3 392 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 DKK3Q9UBP4 350 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 IP6K2Q9UHH9 426 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 TBX22Q9Y458 520 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 CGNL1Q0VF96 1302 aa5.93□□□□□ -1.46
COL3A1-205ENST00000470167 SOWAHDA6NJG2 315 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 M0R2N6 131 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 PRC1O43663 620 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 LILRA1O75019 489 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 KIAA0754O94854 1291 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 SMC2O95347 1197 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 MYL1P05976 194 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 HNRNPCP07910 306 aaKnown RBP eCLIP5.92□□□□□ -1.46
COL3A1-205ENST00000470167 TPM1P09493 284 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 CYP11B2P19099 503 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 CCNCP24863 283 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 TPP2P29144 1249 aaPredicted RBP5.92□□□□□ -1.46
COL3A1-205ENST00000470167 USP11P51784 963 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 SH3BGRP55822 239 aaPredicted RBP5.92□□□□□ -1.46
COL3A1-205ENST00000470167 CTAG1AP78358 180 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 MECOMQ03112 1051 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 CNGA3Q16281 694 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 CCDC93Q567U6 631 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 CCDC158Q5M9N0 1113 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 MMS22LQ6ZRQ5 1243 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 ANKRD18AQ8IVF6 992 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 CCDC65Q8IXS2 484 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 ERMNQ8TAM6 284 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 ANKRD24Q8TF21 1146 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 DNAAF4Q8WXU2 420 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 TBC1D5Q92609 795 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 UIMC1Q96RL1 719 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 IRX2Q9BZI1 471 aaPredicted RBP5.92□□□□□ -1.46
COL3A1-205ENST00000470167 ETNK1Q9HBU6 452 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 SENP2Q9HC62 589 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 TCEAL9Q9UHQ7 104 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 DDX41Q9UJV9 622 aaKnown RBP5.92□□□□□ -1.46
COL3A1-205ENST00000470167 ASAP1Q9ULH1 1129 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 SQORQ9Y6N5 450 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 EVC2Q86UK5 1308 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 PLEKHG2Q9H7P9 1386 aa5.92□□□□□ -1.46
COL3A1-205ENST00000470167 ABL1P00519 1130 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 TSPY4P0CV99 314 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 TSPY10P0CW01 314 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 PECAM1P16284 738 aaPredicted RBP5.91□□□□□ -1.46
COL3A1-205ENST00000470167 YY1P25490 414 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 WEE1P30291 646 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 HOXC13P31276 330 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 MAGEA9P43362 315 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 NASPP49321 788 aaPredicted RBP5.91□□□□□ -1.46
COL3A1-205ENST00000470167 NR5A1Q13285 461 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 ZNF211Q13398 564 aaPredicted RBP5.91□□□□□ -1.46
COL3A1-205ENST00000470167 FKBP5Q13451 457 aaPredicted RBP5.91□□□□□ -1.46
COL3A1-205ENST00000470167 SART3Q15020 963 aaKnown RBP5.91□□□□□ -1.46
COL3A1-205ENST00000470167 TAF11Q15544 211 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 DBN1Q16643 649 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 KIAA0753Q2KHM9 967 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 MUM1Q2TAK8 710 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 SPRYD7Q5W111 196 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 KANK3Q6NY19 840 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 CAPN12Q6ZSI9 719 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 TAS1R3Q7RTX0 852 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 SAPCD2Q86UD0 394 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 PEX5LQ8IYB4 626 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 TNS4Q8IZW8 715 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 NLGN1Q8N2Q7 840 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 CCDC89Q8N998 374 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 SLC43A3Q8NBI5 491 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 RNF214Q8ND24 703 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 APPL2Q8NEU8 664 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 ZFPM2Q8WW38 1151 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 RTF1Q92541 710 aaKnown RBP5.91□□□□□ -1.46
COL3A1-205ENST00000470167 JARID2Q92833 1246 aaPredicted RBP5.91□□□□□ -1.46
COL3A1-205ENST00000470167 NAF1Q96HR8 494 aaKnown RBP5.91□□□□□ -1.46
COL3A1-205ENST00000470167 SCLT1Q96NL6 688 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 XPO4Q9C0E2 1151 aaKnown RBP5.91□□□□□ -1.46
COL3A1-205ENST00000470167 SLC7A5P2Q9GIP4 190 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 TMX1Q9H3N1 280 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 AVENQ9NQS1 362 aaPredicted RBP5.91□□□□□ -1.46
COL3A1-205ENST00000470167 RAB6BQ9NRW1 208 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 CUEDC1Q9NWM3 386 aaPredicted RBP5.91□□□□□ -1.46
COL3A1-205ENST00000470167 SEL1LQ9UBV2 794 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 SEPT3Q9UH03 358 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 POLG2Q9UHN1 485 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 SERTAD1Q9UHV2 236 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 CHMP3Q9Y3E7 222 aa5.91□□□□□ -1.46
COL3A1-205ENST00000470167 LRRFIP2Q9Y608 721 aaKnown RBP5.91□□□□□ -1.46
COL3A1-205ENST00000470167 PDLIM1O00151 329 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 SGTAO43765 313 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 ALDH1A1P00352 501 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 INHAP05111 366 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 ADD1P35611 737 aaKnown RBP5.9□□□□□ -1.46
COL3A1-205ENST00000470167 PAPOLAP51003 745 aaKnown RBP5.9□□□□□ -1.46
COL3A1-205ENST00000470167 CSE1LP55060 971 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms