RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 ACSS3Q9H6R3 686 aa6.77□□□□□ -1.33
BRCA2-202ENST00000470094 DISC1Q9NRI5 854 aa6.77□□□□□ -1.33
BRCA2-202ENST00000470094 DAGLAQ9Y4D2 1042 aa6.77□□□□□ -1.33
BRCA2-202ENST00000470094 RNGTTO60942 597 aaKnown RBP6.76□□□□□ -1.33
BRCA2-202ENST00000470094 NFICP08651 508 aa6.76□□□□□ -1.33
BRCA2-202ENST00000470094 ITGB7P26010 798 aa6.76□□□□□ -1.33
BRCA2-202ENST00000470094 ERVK-24P63145 666 aa6.76□□□□□ -1.33
BRCA2-202ENST00000470094 XP32Q5T750 250 aa6.76□□□□□ -1.33
BRCA2-202ENST00000470094 DIEXFQ68CQ4 756 aaKnown RBP6.76□□□□□ -1.33
BRCA2-202ENST00000470094 GAL3ST3Q96A11 431 aa6.76□□□□□ -1.33
BRCA2-202ENST00000470094 DBNDD2Q9BQY9 259 aa6.76□□□□□ -1.33
BRCA2-202ENST00000470094 MIR1-1HGQ9H1L0 117 aa6.76□□□□□ -1.33
BRCA2-202ENST00000470094 SEMA6CQ9H3T2 930 aa6.76□□□□□ -1.33
BRCA2-202ENST00000470094 PICK1Q9NRD5 415 aa6.76□□□□□ -1.33
BRCA2-202ENST00000470094 DCDC2CA8MYV0 355 aa6.75□□□□□ -1.33
BRCA2-202ENST00000470094 HCLS1P14317 486 aaPredicted RBP6.75□□□□□ -1.33
BRCA2-202ENST00000470094 PWP1Q13610 501 aa6.75□□□□□ -1.33
BRCA2-202ENST00000470094 SEPT6Q14141 434 aa6.75□□□□□ -1.33
BRCA2-202ENST00000470094 TTLL4Q14679 1199 aa6.75□□□□□ -1.33
BRCA2-202ENST00000470094 RELL1Q8IUW5 271 aa6.75□□□□□ -1.33
BRCA2-202ENST00000470094 PHC3Q8NDX5 983 aa6.75□□□□□ -1.33
BRCA2-202ENST00000470094 ELMO3Q96BJ8 720 aa6.75□□□□□ -1.33
BRCA2-202ENST00000470094 TLR6Q9Y2C9 796 aa6.75□□□□□ -1.33
BRCA2-202ENST00000470094 PCDHB5Q9Y5E4 795 aa6.75□□□□□ -1.33
BRCA2-202ENST00000470094 TFE3P19532 575 aaPredicted RBP6.74□□□□□ -1.33
BRCA2-202ENST00000470094 PTPN11Q06124 597 aaPredicted RBP6.74□□□□□ -1.33
BRCA2-202ENST00000470094 PPM1JQ5JR12 505 aa6.74□□□□□ -1.33
BRCA2-202ENST00000470094 HDXQ7Z353 690 aa6.74□□□□□ -1.33
BRCA2-202ENST00000470094 SMYD4Q8IYR2 804 aaPredicted RBP6.74□□□□□ -1.33
BRCA2-202ENST00000470094 TMEM87AQ8NBN3 555 aa6.74□□□□□ -1.33
BRCA2-202ENST00000470094 RNF214Q8ND24 703 aa6.74□□□□□ -1.33
BRCA2-202ENST00000470094 GIMAP7Q8NHV1 300 aa6.74□□□□□ -1.33
BRCA2-202ENST00000470094 MFSD14AQ96MC6 490 aa6.74□□□□□ -1.33
BRCA2-202ENST00000470094 SSU72Q9NP77 194 aaKnown RBP6.74□□□□□ -1.33
BRCA2-202ENST00000470094 CSADQ9Y600 493 aa6.74□□□□□ -1.33
BRCA2-202ENST00000470094 F6X3S4 739 aa6.73□□□□□ -1.33
BRCA2-202ENST00000470094 GBP2P32456 591 aaPredicted RBP6.73□□□□□ -1.33
BRCA2-202ENST00000470094 WIPI1Q5MNZ9 446 aaPredicted RBP6.73□□□□□ -1.33
BRCA2-202ENST00000470094 LRFN4Q6PJG9 635 aa6.73□□□□□ -1.33
BRCA2-202ENST00000470094 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.73□□□□□ -1.33
BRCA2-202ENST00000470094 HS2ST1Q7LGA3 356 aa6.73□□□□□ -1.33
BRCA2-202ENST00000470094 C12orf40Q86WS4 652 aa6.73□□□□□ -1.33
BRCA2-202ENST00000470094 FBXL6Q8N531 539 aa6.73□□□□□ -1.33
BRCA2-202ENST00000470094 TBC1D32Q96NH3 1257 aa6.73□□□□□ -1.33
BRCA2-202ENST00000470094 TMEM74Q96NL1 305 aa6.73□□□□□ -1.33
BRCA2-202ENST00000470094 RSRP1Q9BUV0 290 aa6.73□□□□□ -1.33
BRCA2-202ENST00000470094 LGR6Q9HBX8 967 aa6.73□□□□□ -1.33
BRCA2-202ENST00000470094 PODXL2Q9NZ53 605 aa6.73□□□□□ -1.33
BRCA2-202ENST00000470094 PRKAG2Q9UGJ0 569 aa6.73□□□□□ -1.33
BRCA2-202ENST00000470094 PRAMEF27A3QJZ7 478 aa6.72□□□□□ -1.33
BRCA2-202ENST00000470094 FANCGO15287 622 aa6.72□□□□□ -1.33
BRCA2-202ENST00000470094 NEFMP07197 916 aa6.72□□□□□ -1.33
BRCA2-202ENST00000470094 INPP5AQ14642 412 aa6.72□□□□□ -1.33
BRCA2-202ENST00000470094 TSNAXIP1Q2TAA8 658 aa6.72□□□□□ -1.33
BRCA2-202ENST00000470094 ZMYM1Q5SVZ6 1142 aa6.72□□□□□ -1.33
BRCA2-202ENST00000470094 SHKBP1Q8TBC3 707 aa6.72□□□□□ -1.33
BRCA2-202ENST00000470094 JARID2Q92833 1246 aaPredicted RBP6.72□□□□□ -1.33
BRCA2-202ENST00000470094 ISL2Q96A47 359 aa6.72□□□□□ -1.33
BRCA2-202ENST00000470094 PLPPR2Q96GM1 343 aa6.72□□□□□ -1.33
BRCA2-202ENST00000470094 BACH2Q9BYV9 841 aa6.72□□□□□ -1.33
BRCA2-202ENST00000470094 GGT7Q9UJ14 662 aa6.72□□□□□ -1.33
BRCA2-202ENST00000470094 PCOLCE2Q9UKZ9 415 aa6.72□□□□□ -1.33
BRCA2-202ENST00000470094 SNCAIPQ9Y6H5 919 aa6.72□□□□□ -1.33
BRCA2-202ENST00000470094 WDR64B1ANS9 1081 aa6.71□□□□□ -1.34
BRCA2-202ENST00000470094 DYNC1LI2O43237 492 aaPredicted RBP6.71□□□□□ -1.34
BRCA2-202ENST00000470094 VAMP1P23763 118 aa6.71□□□□□ -1.34
BRCA2-202ENST00000470094 LMNB2Q03252 620 aa6.71□□□□□ -1.34
BRCA2-202ENST00000470094 CAMK2GQ13555 558 aaPredicted RBP6.71□□□□□ -1.34
BRCA2-202ENST00000470094 ZBTB37Q5TC79 503 aa6.71□□□□□ -1.34
BRCA2-202ENST00000470094 ERMP1Q7Z2K6 904 aa6.71□□□□□ -1.34
BRCA2-202ENST00000470094 ZAR1Q86SH2 424 aa6.71□□□□□ -1.34
BRCA2-202ENST00000470094 CCDC84Q86UT8 332 aaPredicted RBP6.71□□□□□ -1.34
BRCA2-202ENST00000470094 ZDHHC13Q8IUH4 622 aa6.71□□□□□ -1.34
BRCA2-202ENST00000470094 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.71□□□□□ -1.34
BRCA2-202ENST00000470094 ATG3Q9NT62 314 aa6.71□□□□□ -1.34
BRCA2-202ENST00000470094 KBTBD4Q9NVX7 518 aa6.71□□□□□ -1.34
BRCA2-202ENST00000470094 MINDY4BA8MYZ0 360 aa6.7□□□□□ -1.34
BRCA2-202ENST00000470094 BPNT1O95861 308 aa6.7□□□□□ -1.34
BRCA2-202ENST00000470094 PF4P02776 101 aa6.7□□□□□ -1.34
BRCA2-202ENST00000470094 F13BP05160 661 aa6.7□□□□□ -1.34
BRCA2-202ENST00000470094 RING1Q06587 406 aa6.7□□□□□ -1.34
BRCA2-202ENST00000470094 SNAP47Q5SQN1 464 aa6.7□□□□□ -1.34
BRCA2-202ENST00000470094 SEZ6L2Q6UXD5 910 aa6.7□□□□□ -1.34
BRCA2-202ENST00000470094 CDC37L1Q7L3B6 337 aa6.7□□□□□ -1.34
BRCA2-202ENST00000470094 CYFIP1Q7L576 1253 aa6.7□□□□□ -1.34
BRCA2-202ENST00000470094 KCT2Q8NC54 265 aa6.7□□□□□ -1.34
BRCA2-202ENST00000470094 MRRFQ96E11 262 aaKnown RBP6.7□□□□□ -1.34
BRCA2-202ENST00000470094 RHOVQ96L33 236 aa6.7□□□□□ -1.34
BRCA2-202ENST00000470094 METTL22Q9BUU2 404 aaPredicted RBP6.7□□□□□ -1.34
BRCA2-202ENST00000470094 OSBPL1AQ9BXW6 950 aa6.7□□□□□ -1.34
BRCA2-202ENST00000470094 RNF112Q9ULX5 631 aa6.7□□□□□ -1.34
BRCA2-202ENST00000470094 NTF4P34130 210 aa6.69□□□□□ -1.34
BRCA2-202ENST00000470094 ADMP35318 185 aa6.69□□□□□ -1.34
BRCA2-202ENST00000470094 ZNF76P36508 570 aa6.69□□□□□ -1.34
BRCA2-202ENST00000470094 CDK8P49336 464 aa6.69□□□□□ -1.34
BRCA2-202ENST00000470094 CYP27A1Q02318 531 aa6.69□□□□□ -1.34
BRCA2-202ENST00000470094 RPL6Q02878 288 aaKnown RBP6.69□□□□□ -1.34
BRCA2-202ENST00000470094 CDK5R2Q13319 367 aa6.69□□□□□ -1.34
BRCA2-202ENST00000470094 CPSF6Q16630 551 aaKnown RBP eCLIP6.69□□□□□ -1.34
BRCA2-202ENST00000470094 LDLRAD1Q5T700 205 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms