RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.6□□□□□ -0.71
LSM2-210ENST00000470086 CHD9Q3L8U1 2897 aa10.6□□□□□ -0.71
LSM2-210ENST00000470086 NEURL1BA8MQ27 555 aa10.59□□□□□ -0.71
LSM2-210ENST00000470086 NEFMP07197 916 aa10.59□□□□□ -0.71
LSM2-210ENST00000470086 CRKP46108 304 aa10.59□□□□□ -0.71
LSM2-210ENST00000470086 MDM2Q00987 491 aaPredicted RBP10.59□□□□□ -0.71
LSM2-210ENST00000470086 C15orf52Q6ZUT6 534 aaKnown RBP10.59□□□□□ -0.71
LSM2-210ENST00000470086 TTF2Q9UNY4 1162 aaKnown RBP10.59□□□□□ -0.71
LSM2-210ENST00000470086 ATRNL1Q5VV63 1379 aa10.59□□□□□ -0.71
LSM2-210ENST00000470086 RPAP1Q9BWH6 1393 aaPredicted RBP10.59□□□□□ -0.71
LSM2-210ENST00000470086 CHD7Q9P2D1 2997 aa10.59□□□□□ -0.71
LSM2-210ENST00000470086 PLXNA1Q9UIW2 1896 aa10.58□□□□□ -0.72
LSM2-210ENST00000470086 TFRCP02786 760 aaKnown RBP10.58□□□□□ -0.72
LSM2-210ENST00000470086 IGHMBP2P38935 993 aaKnown RBP10.58□□□□□ -0.72
LSM2-210ENST00000470086 FKBP1AP62942 108 aaKnown RBP10.58□□□□□ -0.72
LSM2-210ENST00000470086 MFSD14BQ5SR56 506 aa10.58□□□□□ -0.72
LSM2-210ENST00000470086 MYLIPQ8WY64 445 aa10.58□□□□□ -0.72
LSM2-210ENST00000470086 UBE2OQ9C0C9 1292 aaKnown RBP10.58□□□□□ -0.72
LSM2-210ENST00000470086 KCNH4Q9UQ05 1017 aa10.58□□□□□ -0.72
LSM2-210ENST00000470086 FAM205AQ6ZU69 1335 aa10.58□□□□□ -0.72
LSM2-210ENST00000470086 GYG1P46976 350 aa10.57□□□□□ -0.72
LSM2-210ENST00000470086 KCNJ4P48050 445 aa10.57□□□□□ -0.72
LSM2-210ENST00000470086 FCGRTP55899 365 aa10.57□□□□□ -0.72
LSM2-210ENST00000470086 TRIM26Q12899 539 aaPredicted RBP10.57□□□□□ -0.72
LSM2-210ENST00000470086 TNFAIP1Q13829 316 aa10.57□□□□□ -0.72
LSM2-210ENST00000470086 LRRC26Q2I0M4 334 aa10.57□□□□□ -0.72
LSM2-210ENST00000470086 MIGA2Q7L4E1 593 aa10.57□□□□□ -0.72
LSM2-210ENST00000470086 G2E3Q7L622 706 aa10.57□□□□□ -0.72
LSM2-210ENST00000470086 CCDC84Q86UT8 332 aaPredicted RBP10.57□□□□□ -0.72
LSM2-210ENST00000470086 C8orf58Q8NAV2 365 aa10.57□□□□□ -0.72
LSM2-210ENST00000470086 MAFAQ8NHW3 353 aaPredicted RBP10.57□□□□□ -0.72
LSM2-210ENST00000470086 ZNF594Q96JF6 807 aaPredicted RBP10.57□□□□□ -0.72
LSM2-210ENST00000470086 CDX2Q99626 313 aaPredicted RBP10.57□□□□□ -0.72
LSM2-210ENST00000470086 TTYH1Q9H313 450 aaPredicted RBP10.57□□□□□ -0.72
LSM2-210ENST00000470086 IQSEC3Q9UPP2 1182 aaPredicted RBP10.57□□□□□ -0.72
LSM2-210ENST00000470086 PI4KAP2A4QPH2 592 aa10.56□□□□□ -0.72
LSM2-210ENST00000470086 H7C1W4 665 aa10.56□□□□□ -0.72
LSM2-210ENST00000470086 ZNF853P0CG23 659 aa10.56□□□□□ -0.72
LSM2-210ENST00000470086 PLA2G5P39877 138 aa10.56□□□□□ -0.72
LSM2-210ENST00000470086 NECAB2Q7Z6G3 386 aa10.56□□□□□ -0.72
LSM2-210ENST00000470086 TSPYL6Q8N831 410 aa10.56□□□□□ -0.72
LSM2-210ENST00000470086 PI4KAP1Q8N8J0 262 aa10.56□□□□□ -0.72
LSM2-210ENST00000470086 ANKRD2Q9GZV1 360 aa10.56□□□□□ -0.72
LSM2-210ENST00000470086 SERPINA10Q9UK55 444 aa10.56□□□□□ -0.72
LSM2-210ENST00000470086 CSF1RP07333 972 aa10.55□□□□□ -0.72
LSM2-210ENST00000470086 PPATQ06203 517 aa10.55□□□□□ -0.72
LSM2-210ENST00000470086 EPHA10Q5JZY3 1008 aa10.55□□□□□ -0.72
LSM2-210ENST00000470086 ZNF804AQ7Z570 1209 aa10.55□□□□□ -0.72
LSM2-210ENST00000470086 FBXO22Q8NEZ5 403 aa10.55□□□□□ -0.72
LSM2-210ENST00000470086 TDRD7Q8NHU6 1098 aaKnown RBP10.55□□□□□ -0.72
LSM2-210ENST00000470086 PLA2G12BQ9BX93 195 aa10.55□□□□□ -0.72
LSM2-210ENST00000470086 FOCADQ5VW36 1801 aa10.54□□□□□ -0.72
LSM2-210ENST00000470086 PEX10O60683 326 aa10.54□□□□□ -0.72
LSM2-210ENST00000470086 COL6A1P12109 1028 aa10.54□□□□□ -0.72
LSM2-210ENST00000470086 HOXD10P28358 340 aa10.54□□□□□ -0.72
LSM2-210ENST00000470086 FOXO4P98177 505 aa10.54□□□□□ -0.72
LSM2-210ENST00000470086 IRF5Q13568 498 aa10.54□□□□□ -0.72
LSM2-210ENST00000470086 FAM109BQ6ICB4 259 aaPredicted RBP10.54□□□□□ -0.72
LSM2-210ENST00000470086 PXYLP1Q8TE99 480 aa10.54□□□□□ -0.72
LSM2-210ENST00000470086 TRIB2Q92519 343 aa10.54□□□□□ -0.72
LSM2-210ENST00000470086 MPHOSPH8Q99549 860 aa10.54□□□□□ -0.72
LSM2-210ENST00000470086 MFRPQ9BY79 579 aa10.54□□□□□ -0.72
LSM2-210ENST00000470086 C11orf49Q9H6J7 331 aa10.54□□□□□ -0.72
LSM2-210ENST00000470086 BDP1A6H8Y1 2624 aa10.54□□□□□ -0.72
LSM2-210ENST00000470086 RFX7Q2KHR2 1363 aa10.53□□□□□ -0.72
LSM2-210ENST00000470086 TNPO2O14787 897 aaKnown RBP10.53□□□□□ -0.72
LSM2-210ENST00000470086 HSP90B1P14625 803 aaKnown RBP10.53□□□□□ -0.72
LSM2-210ENST00000470086 LMOD3Q0VAK6 560 aa10.53□□□□□ -0.72
LSM2-210ENST00000470086 NFIAQ12857 509 aa10.53□□□□□ -0.72
LSM2-210ENST00000470086 C9orf50Q5SZB4 431 aa10.53□□□□□ -0.72
LSM2-210ENST00000470086 APOBEC3HQ6NTF7 200 aaKnown RBP10.53□□□□□ -0.72
LSM2-210ENST00000470086 PARK7Q99497 189 aaKnown RBP10.53□□□□□ -0.72
LSM2-210ENST00000470086 ZNF112Q9UJU3 913 aa10.53□□□□□ -0.72
LSM2-210ENST00000470086 A0A0G2JLL6 359 aaPredicted RBP10.52□□□□□ -0.73
LSM2-210ENST00000470086 PLIN1O60240 522 aa10.52□□□□□ -0.73
LSM2-210ENST00000470086 GCKRQ14397 625 aa10.52□□□□□ -0.73
LSM2-210ENST00000470086 TREML2Q5T2D2 321 aa10.52□□□□□ -0.73
LSM2-210ENST00000470086 KSR2Q6VAB6 950 aa10.52□□□□□ -0.73
LSM2-210ENST00000470086 PRRT2Q7Z6L0 340 aaPredicted RBP10.52□□□□□ -0.73
LSM2-210ENST00000470086 ZFPM1Q8IX07 1006 aa10.52□□□□□ -0.73
LSM2-210ENST00000470086 ANKLE1Q8NAG6 615 aa10.52□□□□□ -0.73
LSM2-210ENST00000470086 FAM84BQ96KN1 310 aaPredicted RBP10.52□□□□□ -0.73
LSM2-210ENST00000470086 TMEM121BQ9BXQ6 578 aaPredicted RBP10.52□□□□□ -0.73
LSM2-210ENST00000470086 NBPF3Q9H094 633 aa10.52□□□□□ -0.73
LSM2-210ENST00000470086 OGDHLQ9ULD0 1010 aa10.52□□□□□ -0.73
LSM2-210ENST00000470086 MYO5AQ9Y4I1 1855 aaKnown RBP10.52□□□□□ -0.73
LSM2-210ENST00000470086 WDFY4Q6ZS81 3184 aa10.52□□□□□ -0.73
LSM2-210ENST00000470086 LRRC37A2A6NM11 1700 aa10.51□□□□□ -0.73
LSM2-210ENST00000470086 TNNI2P48788 182 aa10.51□□□□□ -0.73
LSM2-210ENST00000470086 NOL9Q5SY16 702 aaKnown RBP10.51□□□□□ -0.73
LSM2-210ENST00000470086 ZNF697Q5TEC3 545 aa10.51□□□□□ -0.73
LSM2-210ENST00000470086 ANKRD13CQ8N6S4 541 aa10.51□□□□□ -0.73
LSM2-210ENST00000470086 ZNF341Q9BYN7 854 aa10.51□□□□□ -0.73
LSM2-210ENST00000470086 PUS3Q9BZE2 481 aaKnown RBP10.51□□□□□ -0.73
LSM2-210ENST00000470086 BOLA1Q9Y3E2 137 aa10.51□□□□□ -0.73
LSM2-210ENST00000470086 TMEM265A0A087WTH1 108 aa10.5□□□□□ -0.73
LSM2-210ENST00000470086 WDHD1O75717 1129 aaPredicted RBP10.5□□□□□ -0.73
LSM2-210ENST00000470086 HMGCRP04035 888 aa10.5□□□□□ -0.73
LSM2-210ENST00000470086 TCP10Q12799 353 aa10.5□□□□□ -0.73
LSM2-210ENST00000470086 CHAF1AQ13111 956 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms