RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 MGAMO43451 1857 aa15.19■□□□□ 0.02
LSM2-209ENST00000470083 PTPRAP18433 802 aa15.19■□□□□ 0.02
LSM2-209ENST00000470083 TCP10Q12799 353 aa15.19■□□□□ 0.02
LSM2-209ENST00000470083 FAM110CQ1W6H9 321 aa15.19■□□□□ 0.02
LSM2-209ENST00000470083 CAVIN4Q5BKX8 364 aa15.19■□□□□ 0.02
LSM2-209ENST00000470083 GADL1Q6ZQY3 521 aa15.19■□□□□ 0.02
LSM2-209ENST00000470083 SCYL3Q8IZE3 742 aa15.19■□□□□ 0.02
LSM2-209ENST00000470083 ANKRD13CQ8N6S4 541 aa15.19■□□□□ 0.02
LSM2-209ENST00000470083 PICK1Q9NRD5 415 aa15.19■□□□□ 0.02
LSM2-209ENST00000470083 AFG3L2Q9Y4W6 797 aa15.19■□□□□ 0.02
LSM2-209ENST00000470083 MROH5Q6ZUA9 1318 aa15.18■□□□□ 0.02
LSM2-209ENST00000470083 PHF20L1A8MW92 1017 aa15.18■□□□□ 0.02
LSM2-209ENST00000470083 NFIAQ12857 509 aa15.18■□□□□ 0.02
LSM2-209ENST00000470083 BEND3Q5T5X7 828 aa15.18■□□□□ 0.02
LSM2-209ENST00000470083 FAM161BQ96MY7 647 aa15.18■□□□□ 0.02
LSM2-209ENST00000470083 PUS3Q9BZE2 481 aaKnown RBP15.18■□□□□ 0.02
LSM2-209ENST00000470083 ATRNL1Q5VV63 1379 aa15.17■□□□□ 0.02
LSM2-209ENST00000470083 GRM8O00222 908 aa15.17■□□□□ 0.02
LSM2-209ENST00000470083 MDM2Q00987 491 aaPredicted RBP15.17■□□□□ 0.02
LSM2-209ENST00000470083 TRIM32Q13049 653 aa15.17■□□□□ 0.02
LSM2-209ENST00000470083 ZNF697Q5TEC3 545 aa15.17■□□□□ 0.02
LSM2-209ENST00000470083 CDC42EP5Q6NZY7 148 aa15.17■□□□□ 0.02
LSM2-209ENST00000470083 AGTPBP1Q9UPW5 1226 aa15.17■□□□□ 0.02
LSM2-209ENST00000470083 CDH23Q9H251 3354 aa15.16■□□□□ 0.02
LSM2-209ENST00000470083 COL6A1P12109 1028 aa15.16■□□□□ 0.02
LSM2-209ENST00000470083 MAFAQ8NHW3 353 aaPredicted RBP15.16■□□□□ 0.02
LSM2-209ENST00000470083 FAM198AQ9UFP1 575 aa15.16■□□□□ 0.02
LSM2-209ENST00000470083 GJD2Q9UKL4 321 aa15.16■□□□□ 0.02
LSM2-209ENST00000470083 DAGLAQ9Y4D2 1042 aa15.16■□□□□ 0.02
LSM2-209ENST00000470083 HOXD11P31277 338 aaPredicted RBP15.15■□□□□ 0.02
LSM2-209ENST00000470083 MAP3K21Q5TCX8 1036 aa15.15■□□□□ 0.02
LSM2-209ENST00000470083 CDX2Q99626 313 aaPredicted RBP15.15■□□□□ 0.02
LSM2-209ENST00000470083 PNMA3Q9UL41 463 aa15.15■□□□□ 0.02
LSM2-209ENST00000470083 TRIM75PA6NK02 468 aa15.14■□□□□ 0.01
LSM2-209ENST00000470083 F6X3S4 739 aa15.14■□□□□ 0.01
LSM2-209ENST00000470083 COL9A1P20849 921 aa15.14■□□□□ 0.01
LSM2-209ENST00000470083 LRRC26Q2I0M4 334 aa15.14■□□□□ 0.01
LSM2-209ENST00000470083 TRIB2Q92519 343 aa15.14■□□□□ 0.01
LSM2-209ENST00000470083 SYMPKQ92797 1274 aaKnown RBP15.14■□□□□ 0.01
LSM2-209ENST00000470083 DDX60LQ5H9U9 1706 aaKnown RBP15.14■□□□□ 0.01
LSM2-209ENST00000470083 KIF16BQ96L93 1317 aa15.14■□□□□ 0.01
LSM2-209ENST00000470083 DNAH12Q6ZR08 3092 aa15.13■□□□□ 0.01
LSM2-209ENST00000470083 GCLCP48506 637 aaPredicted RBP15.13■□□□□ 0.01
LSM2-209ENST00000470083 METTL24Q5JXM2 366 aa15.13■□□□□ 0.01
LSM2-209ENST00000470083 ZFPM1Q8IX07 1006 aa15.13■□□□□ 0.01
LSM2-209ENST00000470083 VGLL2Q8N8G2 317 aa15.13■□□□□ 0.01
LSM2-209ENST00000470083 WDR66Q8TBY9 1149 aa15.13■□□□□ 0.01
LSM2-209ENST00000470083 RNF216Q9NWF9 866 aaPredicted RBP15.13■□□□□ 0.01
LSM2-209ENST00000470083 CTNND1O60716 968 aaKnown RBP15.12■□□□□ 0.01
LSM2-209ENST00000470083 PDE8BO95263 885 aa15.12■□□□□ 0.01
LSM2-209ENST00000470083 PRKAR2AP13861 404 aaKnown RBP15.12■□□□□ 0.01
LSM2-209ENST00000470083 MAP3K10Q02779 954 aa15.12■□□□□ 0.01
LSM2-209ENST00000470083 DIXDC1Q155Q3 683 aa15.12■□□□□ 0.01
LSM2-209ENST00000470083 TREML2Q5T2D2 321 aa15.12■□□□□ 0.01
LSM2-209ENST00000470083 LBHD1Q9BQE6 289 aaPredicted RBP15.12■□□□□ 0.01
LSM2-209ENST00000470083 SPINK5Q9NQ38 1064 aaPredicted RBP15.12■□□□□ 0.01
LSM2-209ENST00000470083 USP40Q9NVE5 1235 aa15.12■□□□□ 0.01
LSM2-209ENST00000470083 C9orf78Q9NZ63 289 aaPredicted RBP15.12■□□□□ 0.01
LSM2-209ENST00000470083 LRRFIP2Q9Y608 721 aaKnown RBP15.12■□□□□ 0.01
LSM2-209ENST00000470083 LRRC24Q50LG9 513 aa15.11■□□□□ 0.01
LSM2-209ENST00000470083 PROCA1Q8NCQ7 364 aaPredicted RBP15.11■□□□□ 0.01
LSM2-209ENST00000470083 DOCK3Q8IZD9 2030 aa15.1■□□□□ 0.01
LSM2-209ENST00000470083 ENTPD3O75355 529 aa15.1■□□□□ 0.01
LSM2-209ENST00000470083 XRCC5P13010 732 aaKnown RBP15.1■□□□□ 0.01
LSM2-209ENST00000470083 KAZALD1Q96I82 304 aa15.1■□□□□ 0.01
LSM2-209ENST00000470083 SUCLG2Q96I99 432 aa15.1■□□□□ 0.01
LSM2-209ENST00000470083 IDI2Q9BXS1 227 aa15.1■□□□□ 0.01
LSM2-209ENST00000470083 SEMA6BQ9H3T3 888 aa15.1■□□□□ 0.01
LSM2-209ENST00000470083 ALDH1L1O75891 902 aa15.09■□□□□ 0.01
LSM2-209ENST00000470083 IFIT1P09914 478 aaKnown RBP15.09■□□□□ 0.01
LSM2-209ENST00000470083 PRDX5P30044 214 aa15.09■□□□□ 0.01
LSM2-209ENST00000470083 ZEB1P37275 1124 aaPredicted RBP15.09■□□□□ 0.01
LSM2-209ENST00000470083 RGS3P49796 1198 aa15.09■□□□□ 0.01
LSM2-209ENST00000470083 PUM3Q15397 648 aaKnown RBP15.09■□□□□ 0.01
LSM2-209ENST00000470083 SOCS4Q8WXH5 440 aa15.09■□□□□ 0.01
LSM2-209ENST00000470083 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.09■□□□□ 0.01
LSM2-209ENST00000470083 CYP2B6P20813 491 aa15.08■□□□□ 0
LSM2-209ENST00000470083 FGFR2P21802 821 aa15.08■□□□□ 0
LSM2-209ENST00000470083 PABPC4Q13310 644 aaKnown RBP eCLIP15.08■□□□□ 02e-7■■■■□ 25.3
LSM2-209ENST00000470083 CCDC27Q2M243 656 aa15.08■□□□□ 0
LSM2-209ENST00000470083 LHX8Q68G74 356 aa15.08■□□□□ 0
LSM2-209ENST00000470083 SH3BP5LQ7L8J4 393 aa15.08■□□□□ 0
LSM2-209ENST00000470083 CCDC84Q86UT8 332 aaPredicted RBP15.08■□□□□ 0
LSM2-209ENST00000470083 ZSCAN29Q8IWY8 852 aaPredicted RBP15.08■□□□□ 0
LSM2-209ENST00000470083 TRMT44Q8IYL2 757 aaKnown RBP15.08■□□□□ 0
LSM2-209ENST00000470083 MYLIPQ8WY64 445 aa15.08■□□□□ 0
LSM2-209ENST00000470083 MORF4L1Q9UBU8 362 aa15.08■□□□□ 0
LSM2-209ENST00000470083 RFX7Q2KHR2 1363 aa15.08■□□□□ 0
LSM2-209ENST00000470083 VAMP4O75379 141 aa15.07■□□□□ 0
LSM2-209ENST00000470083 LDHBP07195 334 aaKnown RBP15.07■□□□□ 0
LSM2-209ENST00000470083 CACNB2Q08289 660 aaPredicted RBP15.07■□□□□ 0
LSM2-209ENST00000470083 RABL6Q3YEC7 729 aaPredicted RBP15.07■□□□□ 0
LSM2-209ENST00000470083 WWC1Q8IX03 1113 aa15.07■□□□□ 0
LSM2-209ENST00000470083 NUDT12Q9BQG2 462 aa15.07■□□□□ 0
LSM2-209ENST00000470083 ASCC2Q9H1I8 757 aaPredicted RBP15.07■□□□□ 0
LSM2-209ENST00000470083 IL16Q14005 1332 aa15.07■□□□□ 0
LSM2-209ENST00000470083 DDTLA6NHG4 134 aaPredicted RBP15.06■□□□□ 0
LSM2-209ENST00000470083 TNFRSF10AO00220 468 aa15.06■□□□□ 0
LSM2-209ENST00000470083 SLURP2P0DP57 97 aa15.06■□□□□ 0
LSM2-209ENST00000470083 FOSL2P15408 326 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms