RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 IFFO1Q0D2I5 559 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 SNCBQ16143 134 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 CCDC40Q4G0X9 1142 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 MCM10Q7L590 875 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 UBE3BQ7Z3V4 1068 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 KIAA1328Q86T90 577 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 TAX1BP1Q86VP1 789 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 MAB21L3Q8N8X9 362 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 CCDC51Q96ER9 411 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 TCEANC2Q96MN5 208 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 DESI2Q9BSY9 194 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 TSPYL4Q9UJ04 414 aa10.24□□□□□ -0.77
SMARCE1-207ENST00000469334 SIGLEC1Q9BZZ2 1709 aa10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 MINK1Q8N4C8 1332 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 NDUFAB1O14561 156 aa10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 NBPF7P0C2Y1 421 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 FECHP22830 423 aa10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 INHBEP58166 350 aa10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 AMPD2Q01433 879 aa10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 CKAP4Q07065 602 aaKnown RBP10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 TMED8Q6PL24 325 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 Q6ZUG5 572 aa10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 ELOA2Q8IYF1 753 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 SLC35F6Q8N357 371 aa10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 ZNF483Q8TF39 744 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 TATDN2Q93075 761 aa10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 SLC24A3Q9HC58 644 aa10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 LZTFL1Q9NQ48 299 aa10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 FANCLQ9NW38 375 aa10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 CABP1Q9NZU7 370 aa10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 DACH1Q9UI36 760 aa10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 MYO6Q9UM54 1294 aa10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 POGZQ7Z3K3 1410 aa10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 FMN2Q9NZ56 1722 aa10.23□□□□□ -0.77
SMARCE1-207ENST00000469334 TTC36A6NLP5 189 aa10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 AGPSO00116 658 aa10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 PFKFB1P16118 471 aa10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 FBLN2P98095 1184 aa10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 SEMA3FQ13275 785 aa10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 SAFB2Q14151 953 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 NBPF14Q5TI25 921 aa10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 TLDC1Q6P9B6 456 aa10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 NOA1Q8NC60 698 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 CDK19Q9BWU1 502 aa10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 HOMER3Q9NSC5 361 aa10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 HOOK1Q9UJC3 728 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 MAP3K15Q6ZN16 1313 aa10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 FAM237AA0A1B0GTK4 181 aa10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 PES1O00541 588 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 CLSTN1O94985 981 aa10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 ZNF18P17022 549 aa10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 ADKP55263 362 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 TRAF1Q13077 416 aa10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 CALR3Q96L12 384 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 FAM227BQ96M60 508 aa10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 SH3BP1Q9Y3L3 701 aa10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 U3KPZ7 1027 aaPredicted RBP10.22□□□□□ -0.77
SMARCE1-207ENST00000469334 NAP1L1P55209 391 aaKnown RBP10.21□□□□□ -0.77
SMARCE1-207ENST00000469334 AKAP17AQ02040 695 aaKnown RBP10.21□□□□□ -0.77
SMARCE1-207ENST00000469334 OS9Q13438 667 aaPredicted RBP10.21□□□□□ -0.77
SMARCE1-207ENST00000469334 RBBP5Q15291 538 aaKnown RBP10.21□□□□□ -0.77
SMARCE1-207ENST00000469334 TTC19Q6DKK2 380 aaPredicted RBP10.21□□□□□ -0.77
SMARCE1-207ENST00000469334 IQCEQ6IPM2 695 aa10.21□□□□□ -0.77
SMARCE1-207ENST00000469334 HOOK2Q96ED9 719 aa10.21□□□□□ -0.77
SMARCE1-207ENST00000469334 RSRC1Q96IZ7 334 aaKnown RBP10.21□□□□□ -0.77
SMARCE1-207ENST00000469334 SELENOOQ9BVL4 669 aa10.21□□□□□ -0.77
SMARCE1-207ENST00000469334 TEX13AQ9BXU3 409 aaPredicted RBP10.21□□□□□ -0.77
SMARCE1-207ENST00000469334 IRX2Q9BZI1 471 aaPredicted RBP10.21□□□□□ -0.77
SMARCE1-207ENST00000469334 SIL1Q9H173 461 aa10.21□□□□□ -0.77
SMARCE1-207ENST00000469334 MYH8P13535 1937 aa10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 CARMIL3Q8ND23 1372 aa10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 NALCNQ8IZF0 1738 aa10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 SOWAHDA6NJG2 315 aa10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 SLMAPQ14BN4 828 aa10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 SKIDA1Q1XH10 827 aa10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 NUTM2DQ5VT03 806 aaPredicted RBP10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 CCDC70Q6NSX1 233 aa10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 RAD9BQ6WBX8 426 aa10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 PPFIBP1Q86W92 1011 aa10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 TICAM2Q86XR7 235 aa10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 NUTM2AQ8IVF1 878 aaPredicted RBP10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 PARP9Q8IXQ6 854 aa10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 C3orf20Q8ND61 904 aa10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 CCDC26Q8TAB7 109 aa10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 TCP11Q8WWU5 503 aa10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 SLC40A1Q9NP59 571 aa10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 FAM184BQ9ULE4 1060 aa10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 ANKARQ7Z5J8 1434 aa10.21□□□□□ -0.78
SMARCE1-207ENST00000469334 A0A0D9SFI3 127 aa10.2□□□□□ -0.78
SMARCE1-207ENST00000469334 ANKRD18BA2A2Z9 1011 aa10.2□□□□□ -0.78
SMARCE1-207ENST00000469334 CTDNEP1O95476 244 aa10.2□□□□□ -0.78
SMARCE1-207ENST00000469334 NEFHP12036 1026 aa10.2□□□□□ -0.78
SMARCE1-207ENST00000469334 SYKP43405 635 aa10.2□□□□□ -0.78
SMARCE1-207ENST00000469334 CCNHP51946 323 aaPredicted RBP10.2□□□□□ -0.78
SMARCE1-207ENST00000469334 COL9A3Q14050 684 aaPredicted RBP10.2□□□□□ -0.78
SMARCE1-207ENST00000469334 EMC10Q5UCC4 262 aa10.2□□□□□ -0.78
SMARCE1-207ENST00000469334 ALS2CLQ60I27 953 aa10.2□□□□□ -0.78
SMARCE1-207ENST00000469334 TRAPPC11Q7Z392 1133 aa10.2□□□□□ -0.78
SMARCE1-207ENST00000469334 CNGA4Q8IV77 575 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms