RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 SRCIN1Q9C0H9 1055 aa8.52□□□□□ -1.05
LSM5-209ENST00000468872 PIDD1Q9HB75 910 aa8.52□□□□□ -1.05
LSM5-209ENST00000468872 DISC1Q9NRI5 854 aa8.52□□□□□ -1.05
LSM5-209ENST00000468872 WWC3Q9ULE0 1092 aa8.52□□□□□ -1.05
LSM5-209ENST00000468872 COL17A1Q9UMD9 1497 aaPredicted RBP8.51□□□□□ -1.05
LSM5-209ENST00000468872 MAP1SQ66K74 1059 aaPredicted RBP8.51□□□□□ -1.05
LSM5-209ENST00000468872 NECAB3Q96P71 396 aaPredicted RBP8.51□□□□□ -1.05
LSM5-209ENST00000468872 ANGEL1Q9UNK9 670 aaKnown RBP8.51□□□□□ -1.05
LSM5-209ENST00000468872 PRNPP04156 253 aa8.5□□□□□ -1.05
LSM5-209ENST00000468872 ZNF252P-AS1Q0IIN9 211 aa8.5□□□□□ -1.05
LSM5-209ENST00000468872 OGFOD3Q6PK18 319 aa8.5□□□□□ -1.05
LSM5-209ENST00000468872 TPTE2Q6XPS3 522 aa8.5□□□□□ -1.05
LSM5-209ENST00000468872 EMILIN2Q9BXX0 1053 aa8.5□□□□□ -1.05
LSM5-209ENST00000468872 LRRC4CQ9HCJ2 640 aa8.5□□□□□ -1.05
LSM5-209ENST00000468872 CCDC39Q9UFE4 941 aa8.5□□□□□ -1.05
LSM5-209ENST00000468872 GIPC1O14908 333 aa8.49□□□□□ -1.05
LSM5-209ENST00000468872 LDHBP07195 334 aaKnown RBP8.49□□□□□ -1.05
LSM5-209ENST00000468872 ATP2B2Q01814 1243 aa8.49□□□□□ -1.05
LSM5-209ENST00000468872 TTLL4Q14679 1199 aa8.49□□□□□ -1.05
LSM5-209ENST00000468872 SMYD4Q8IYR2 804 aaPredicted RBP8.49□□□□□ -1.05
LSM5-209ENST00000468872 KRTAP9-2Q9BYQ4 174 aa8.49□□□□□ -1.05
LSM5-209ENST00000468872 BSDC1Q9NW68 430 aaPredicted RBP8.49□□□□□ -1.05
LSM5-209ENST00000468872 PPM1HQ9ULR3 514 aa8.49□□□□□ -1.05
LSM5-209ENST00000468872 ENC1O14682 589 aa8.48□□□□□ -1.05
LSM5-209ENST00000468872 HCLS1P14317 486 aaPredicted RBP8.48□□□□□ -1.05
LSM5-209ENST00000468872 CDK5R2Q13319 367 aa8.48□□□□□ -1.05
LSM5-209ENST00000468872 ZC3H12AQ5D1E8 599 aaKnown RBP8.48□□□□□ -1.05
LSM5-209ENST00000468872 GPBAR1Q8TDU6 330 aa8.48□□□□□ -1.05
LSM5-209ENST00000468872 CEP44Q9C0F1 390 aa8.48□□□□□ -1.05
LSM5-209ENST00000468872 CBX8Q9HC52 389 aa8.48□□□□□ -1.05
LSM5-209ENST00000468872 ZC3H7BQ9UGR2 993 aaKnown RBP8.48□□□□□ -1.05
LSM5-209ENST00000468872 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.47□□□□□ -1.05
LSM5-209ENST00000468872 RNGTTO60942 597 aaKnown RBP8.47□□□□□ -1.05
LSM5-209ENST00000468872 PRPF40AO75400 957 aaKnown RBP8.47□□□□□ -1.05
LSM5-209ENST00000468872 FBXO24O75426 580 aa8.47□□□□□ -1.05
LSM5-209ENST00000468872 PAGE1O75459 146 aa8.47□□□□□ -1.05
LSM5-209ENST00000468872 MPRIPQ6WCQ1 1025 aa8.47□□□□□ -1.05
LSM5-209ENST00000468872 NFXL1Q6ZNB6 911 aa8.47□□□□□ -1.05
LSM5-209ENST00000468872 VSIG10LQ86VR7 867 aa8.47□□□□□ -1.05
LSM5-209ENST00000468872 RNF19AQ9NV58 838 aa8.47□□□□□ -1.05
LSM5-209ENST00000468872 CACNA2D2Q9NY47 1150 aa8.47□□□□□ -1.05
LSM5-209ENST00000468872 SPG7Q9UQ90 795 aa8.47□□□□□ -1.05
LSM5-209ENST00000468872 NEFMP07197 916 aa8.46□□□□□ -1.06
LSM5-209ENST00000468872 TAL1P17542 331 aaPredicted RBP8.46□□□□□ -1.06
LSM5-209ENST00000468872 BMP6P22004 513 aa8.46□□□□□ -1.06
LSM5-209ENST00000468872 ABI1Q8IZP0 508 aa8.46□□□□□ -1.06
LSM5-209ENST00000468872 ACSBG1Q96GR2 724 aa8.46□□□□□ -1.06
LSM5-209ENST00000468872 DUSP9Q99956 384 aaKnown RBP8.46□□□□□ -1.06
LSM5-209ENST00000468872 SAMM50Q9Y512 469 aa8.46□□□□□ -1.06
LSM5-209ENST00000468872 FAM87AP0C7U9 286 aa8.45□□□□□ -1.06
LSM5-209ENST00000468872 VAMP1P23763 118 aa8.45□□□□□ -1.06
LSM5-209ENST00000468872 ERVK-24P63145 666 aa8.45□□□□□ -1.06
LSM5-209ENST00000468872 CYP27C1Q4G0S4 372 aa8.45□□□□□ -1.06
LSM5-209ENST00000468872 GRIN3AQ8TCU5 1115 aa8.45□□□□□ -1.06
LSM5-209ENST00000468872 ANKRD24Q8TF21 1146 aa8.45□□□□□ -1.06
LSM5-209ENST00000468872 FBXL18Q96ME1 805 aa8.45□□□□□ -1.06
LSM5-209ENST00000468872 C12orf49Q9H741 205 aa8.45□□□□□ -1.06
LSM5-209ENST00000468872 IGSF5Q9NSI5 407 aa8.45□□□□□ -1.06
LSM5-209ENST00000468872 ADGRE2Q9UHX3 823 aa8.45□□□□□ -1.06
LSM5-209ENST00000468872 PCOLCE2Q9UKZ9 415 aa8.45□□□□□ -1.06
LSM5-209ENST00000468872 RNF214Q8ND24 703 aa8.44□□□□□ -1.06
LSM5-209ENST00000468872 ISL2Q96A47 359 aa8.44□□□□□ -1.06
LSM5-209ENST00000468872 FAM8A1Q9UBU6 413 aa8.44□□□□□ -1.06
LSM5-209ENST00000468872 PARP2Q9UGN5 583 aa8.44□□□□□ -1.06
LSM5-209ENST00000468872 KRTAP9-6A0A140TA67 174 aa8.43□□□□□ -1.06
LSM5-209ENST00000468872 TRIM37O94972 964 aa8.43□□□□□ -1.06
LSM5-209ENST00000468872 USP17L7P0C7H9 530 aa8.43□□□□□ -1.06
LSM5-209ENST00000468872 MRPL58Q14197 206 aaKnown RBP8.43□□□□□ -1.06
LSM5-209ENST00000468872 RASIP1Q5U651 963 aa8.43□□□□□ -1.06
LSM5-209ENST00000468872 LLGL2Q6P1M3 1020 aa8.43□□□□□ -1.06
LSM5-209ENST00000468872 FAM161BQ96MY7 647 aa8.43□□□□□ -1.06
LSM5-209ENST00000468872 SSU72Q9NP77 194 aaKnown RBP8.43□□□□□ -1.06
LSM5-209ENST00000468872 RECKO95980 971 aa8.42□□□□□ -1.06
LSM5-209ENST00000468872 CELA3AP09093 270 aa8.42□□□□□ -1.06
LSM5-209ENST00000468872 FGD1P98174 961 aa8.42□□□□□ -1.06
LSM5-209ENST00000468872 TP53INP2Q8IXH6 220 aa8.42□□□□□ -1.06
LSM5-209ENST00000468872 FLCNQ8NFG4 579 aa8.42□□□□□ -1.06
LSM5-209ENST00000468872 PAX4O43316 350 aa8.41□□□□□ -1.06
LSM5-209ENST00000468872 LEFTY1O75610 366 aa8.41□□□□□ -1.06
LSM5-209ENST00000468872 LRRC14Q15048 493 aa8.41□□□□□ -1.06
LSM5-209ENST00000468872 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.41□□□□□ -1.06
LSM5-209ENST00000468872 FRMD6Q96NE9 622 aa8.41□□□□□ -1.06
LSM5-209ENST00000468872 DUSP23Q9BVJ7 150 aa8.41□□□□□ -1.06
LSM5-209ENST00000468872 CSADQ9Y600 493 aa8.41□□□□□ -1.06
LSM5-209ENST00000468872 DAB2P98082 770 aa8.4□□□□□ -1.06
LSM5-209ENST00000468872 XPCQ01831 940 aaPredicted RBP8.4□□□□□ -1.06
LSM5-209ENST00000468872 PPM1JQ5JR12 505 aa8.4□□□□□ -1.06
LSM5-209ENST00000468872 PCNX4Q63HM2 1172 aa8.4□□□□□ -1.06
LSM5-209ENST00000468872 SCARA3Q6AZY7 606 aa8.4□□□□□ -1.06
LSM5-209ENST00000468872 TMC4Q7Z404 712 aa8.4□□□□□ -1.06
LSM5-209ENST00000468872 FAM181AQ8N9Y4 354 aa8.4□□□□□ -1.06
LSM5-209ENST00000468872 BCL7CQ8WUZ0 217 aaPredicted RBP8.4□□□□□ -1.06
LSM5-209ENST00000468872 PAK6Q9NQU5 681 aaPredicted RBP8.4□□□□□ -1.06
LSM5-209ENST00000468872 CYP8B1Q9UNU6 501 aa8.4□□□□□ -1.06
LSM5-209ENST00000468872 DCDC2CA8MYV0 355 aa8.39□□□□□ -1.07
LSM5-209ENST00000468872 GNA15P30679 374 aa8.39□□□□□ -1.07
LSM5-209ENST00000468872 NTF4P34130 210 aa8.39□□□□□ -1.07
LSM5-209ENST00000468872 RING1Q06587 406 aa8.39□□□□□ -1.07
LSM5-209ENST00000468872 C12orf40Q86WS4 652 aa8.39□□□□□ -1.07
LSM5-209ENST00000468872 PLD6Q8N2A8 252 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms