RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 BTBD19C9JJ37 291 aa26.77■■□□□ 1.88
TTC28-204ENST00000468807 CCDC158Q5M9N0 1113 aa26.77■■□□□ 1.88
TTC28-204ENST00000468807 PANK1Q8TE04 598 aa26.77■■□□□ 1.88
TTC28-204ENST00000468807 DBNDD2Q9BQY9 259 aa26.77■■□□□ 1.88
TTC28-204ENST00000468807 EFCC1Q9HA90 598 aa26.77■■□□□ 1.88
TTC28-204ENST00000468807 DDX4Q9NQI0 724 aaKnown RBP26.77■■□□□ 1.88
TTC28-204ENST00000468807 SNRKQ9NRH2 765 aa26.77■■□□□ 1.88
TTC28-204ENST00000468807 LRP2BPQ9P2M1 347 aa26.77■■□□□ 1.88
TTC28-204ENST00000468807 CENPFP49454 3210 aa26.76■■□□□ 1.87
TTC28-204ENST00000468807 RFX7Q2KHR2 1363 aa26.76■■□□□ 1.87
TTC28-204ENST00000468807 GPR75-ASB3A0A0A6YYF3 556 aa26.76■■□□□ 1.87
TTC28-204ENST00000468807 LDHCP07864 332 aa26.76■■□□□ 1.87
TTC28-204ENST00000468807 SH3BP5LQ7L8J4 393 aa26.76■■□□□ 1.87
TTC28-204ENST00000468807 ZNF384Q8TF68 577 aa26.76■■□□□ 1.87
TTC28-204ENST00000468807 NSUN4Q96CB9 384 aaKnown RBP26.76■■□□□ 1.87
TTC28-204ENST00000468807 GPR108Q9NPR9 543 aa26.76■■□□□ 1.87
TTC28-204ENST00000468807 DDTLA6NHG4 134 aaPredicted RBP26.74■■□□□ 1.87
TTC28-204ENST00000468807 NOL9Q5SY16 702 aaKnown RBP26.74■■□□□ 1.87
TTC28-204ENST00000468807 ATRNL1Q5VV63 1379 aa26.73■■□□□ 1.87
TTC28-204ENST00000468807 RHBDL3P58872 404 aa26.73■■□□□ 1.87
TTC28-204ENST00000468807 NOL10Q9BSC4 688 aaKnown RBP26.73■■□□□ 1.87
TTC28-204ENST00000468807 PICK1Q9NRD5 415 aa26.73■■□□□ 1.87
TTC28-204ENST00000468807 PTPN22Q9Y2R2 807 aa26.73■■□□□ 1.87
TTC28-204ENST00000468807 SLURP2P0DP57 97 aa26.72■■□□□ 1.87
TTC28-204ENST00000468807 CEP85Q6P2H3 762 aa26.72■■□□□ 1.87
TTC28-204ENST00000468807 ZCCHC17Q9NP64 241 aaKnown RBP26.72■■□□□ 1.87
TTC28-204ENST00000468807 TLR2O60603 784 aa26.71■■□□□ 1.87
TTC28-204ENST00000468807 CAP1Q01518 475 aa26.71■■□□□ 1.87
TTC28-204ENST00000468807 ARHGEF6Q15052 776 aa26.71■■□□□ 1.87
TTC28-204ENST00000468807 SCYL3Q8IZE3 742 aa26.71■■□□□ 1.87
TTC28-204ENST00000468807 CCDC8Q9H0W5 538 aaPredicted RBP26.71■■□□□ 1.87
TTC28-204ENST00000468807 KCNH4Q9UQ05 1017 aa26.71■■□□□ 1.87
TTC28-204ENST00000468807 NOP58Q9Y2X3 529 aaKnown RBP26.71■■□□□ 1.87
TTC28-204ENST00000468807 PHF20L1A8MW92 1017 aa26.7■■□□□ 1.86
TTC28-204ENST00000468807 ECM2O94769 699 aaPredicted RBP26.7■■□□□ 1.86
TTC28-204ENST00000468807 NAA16Q6N069 864 aaPredicted RBP26.7■■□□□ 1.86
TTC28-204ENST00000468807 ZHX2Q9Y6X8 837 aa26.7■■□□□ 1.86
TTC28-204ENST00000468807 PDHXO00330 501 aa26.69■■□□□ 1.86
TTC28-204ENST00000468807 KIF22Q14807 665 aa26.69■■□□□ 1.86
TTC28-204ENST00000468807 ANKRD23Q86SG2 305 aa26.69■■□□□ 1.86
TTC28-204ENST00000468807 TEX11Q8IYF3 940 aa26.69■■□□□ 1.86
TTC28-204ENST00000468807 TLR7Q9NYK1 1049 aaKnown RBP26.69■■□□□ 1.86
TTC28-204ENST00000468807 DBNLQ9UJU6 430 aaKnown RBP26.69■■□□□ 1.86
TTC28-204ENST00000468807 EXOC6BQ9Y2D4 811 aa26.69■■□□□ 1.86
TTC28-204ENST00000468807 MS4A1P11836 297 aa26.68■■□□□ 1.86
TTC28-204ENST00000468807 MAST2Q6P0Q8 1798 aa26.68■■□□□ 1.86
TTC28-204ENST00000468807 FAM196BA6NMK8 535 aa26.67■■□□□ 1.86
TTC28-204ENST00000468807 MAP4K4O95819 1239 aaPredicted RBP26.67■■□□□ 1.86
TTC28-204ENST00000468807 CYP2E1P05181 493 aaPredicted RBP26.67■■□□□ 1.86
TTC28-204ENST00000468807 PTPRAP18433 802 aa26.67■■□□□ 1.86
TTC28-204ENST00000468807 ZAP70P43403 619 aa26.67■■□□□ 1.86
TTC28-204ENST00000468807 SH3RF3Q8TEJ3 882 aaPredicted RBP26.67■■□□□ 1.86
TTC28-204ENST00000468807 OSBPL5Q9H0X9 879 aaPredicted RBP26.67■■□□□ 1.86
TTC28-204ENST00000468807 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.67■■□□□ 1.86
TTC28-204ENST00000468807 AATFQ9NY61 560 aaKnown RBP eCLIP26.67■■□□□ 1.86
TTC28-204ENST00000468807 CPA4Q9UI42 421 aa26.67■■□□□ 1.86
TTC28-204ENST00000468807 DOCK1Q14185 1865 aa26.67■■□□□ 1.86
TTC28-204ENST00000468807 MYO5AQ9Y4I1 1855 aaKnown RBP26.66■■□□□ 1.86
TTC28-204ENST00000468807 PDE4DIPQ5VU43 2346 aa26.66■■□□□ 1.86
TTC28-204ENST00000468807 CXCL11O14625 94 aa26.66■■□□□ 1.86
TTC28-204ENST00000468807 BAG3O95817 575 aa26.66■■□□□ 1.86
TTC28-204ENST00000468807 EAF2Q96CJ1 260 aaPredicted RBP26.66■■□□□ 1.86
TTC28-204ENST00000468807 ARHGAP39Q9C0H5 1083 aa26.66■■□□□ 1.86
TTC28-204ENST00000468807 ZSWIM8A7E2V4 1837 aa26.66■■□□□ 1.86
TTC28-204ENST00000468807 CTNND1O60716 968 aaKnown RBP26.65■■□□□ 1.86
TTC28-204ENST00000468807 NPM3O75607 178 aaKnown RBP26.65■■□□□ 1.86
TTC28-204ENST00000468807 MAP3K10Q02779 954 aa26.65■■□□□ 1.86
TTC28-204ENST00000468807 ERC1Q8IUD2 1116 aa26.65■■□□□ 1.86
TTC28-204ENST00000468807 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.65■■□□□ 1.86
TTC28-204ENST00000468807 LACTBP83111 547 aaPredicted RBP26.64■■□□□ 1.86
TTC28-204ENST00000468807 MOGSQ13724 837 aa26.64■■□□□ 1.86
TTC28-204ENST00000468807 GADL1Q6ZQY3 521 aa26.64■■□□□ 1.86
TTC28-204ENST00000468807 ZNF512BQ96KM6 892 aaPredicted RBP26.64■■□□□ 1.86
TTC28-204ENST00000468807 COG6Q9Y2V7 657 aa26.64■■□□□ 1.86
TTC28-204ENST00000468807 TRIM75PA6NK02 468 aa26.63■■□□□ 1.85
TTC28-204ENST00000468807 CCDC84Q86UT8 332 aaPredicted RBP26.63■■□□□ 1.85
TTC28-204ENST00000468807 AACSQ86V21 672 aa26.63■■□□□ 1.85
TTC28-204ENST00000468807 PARK7Q99497 189 aaKnown RBP26.63■■□□□ 1.85
TTC28-204ENST00000468807 BCL11AQ9H165 835 aa26.63■■□□□ 1.85
TTC28-204ENST00000468807 PIH1D3Q9NQM4 214 aaKnown RBP26.63■■□□□ 1.85
TTC28-204ENST00000468807 AFG3L2Q9Y4W6 797 aa26.63■■□□□ 1.85
TTC28-204ENST00000468807 PTCH2Q9Y6C5 1203 aa26.63■■□□□ 1.85
TTC28-204ENST00000468807 APBB1O00213 710 aa26.62■■□□□ 1.85
TTC28-204ENST00000468807 PLCG2P16885 1265 aa26.62■■□□□ 1.85
TTC28-204ENST00000468807 SLC9C1Q4G0N8 1177 aa26.62■■□□□ 1.85
TTC28-204ENST00000468807 C17orf99Q6UX52 265 aa26.62■■□□□ 1.85
TTC28-204ENST00000468807 FASTKD5Q7L8L6 764 aaKnown RBP26.62■■□□□ 1.85
TTC28-204ENST00000468807 A0A0G2JLL6 359 aaPredicted RBP26.61■■□□□ 1.85
TTC28-204ENST00000468807 TBC1D12O60347 775 aa26.61■■□□□ 1.85
TTC28-204ENST00000468807 IDH1O75874 414 aaKnown RBP26.61■■□□□ 1.85
TTC28-204ENST00000468807 CYP2C8P10632 490 aa26.61■■□□□ 1.85
TTC28-204ENST00000468807 GPAT2Q6NUI2 795 aa26.61■■□□□ 1.85
TTC28-204ENST00000468807 PRRT2Q7Z6L0 340 aaPredicted RBP26.61■■□□□ 1.85
TTC28-204ENST00000468807 ADGRA1Q86SQ6 560 aa26.61■■□□□ 1.85
TTC28-204ENST00000468807 MAPKAPK5Q8IW41 473 aa26.61■■□□□ 1.85
TTC28-204ENST00000468807 TGFBRAP1Q8WUH2 860 aa26.61■■□□□ 1.85
TTC28-204ENST00000468807 IL1RAPL2Q9NP60 686 aa26.61■■□□□ 1.85
TTC28-204ENST00000468807 RCAN3Q9UKA8 241 aa26.61■■□□□ 1.85
TTC28-204ENST00000468807 DDX19BQ9UMR2 479 aa26.61■■□□□ 1.85
TTC28-204ENST00000468807 NDUFB9Q9Y6M9 179 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms