RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 UBTFL1P0CB47 393 aaPredicted RBP16.29■□□□□ 0.2
PTPN7-207ENST00000468385 SLURP2P0DP57 97 aa16.29■□□□□ 0.2
PTPN7-207ENST00000468385 PTPRAP18433 802 aa16.29■□□□□ 0.2
PTPN7-207ENST00000468385 ADORA1P30542 326 aa16.29■□□□□ 0.2
PTPN7-207ENST00000468385 IL15P40933 162 aaPredicted RBP16.29■□□□□ 0.2
PTPN7-207ENST00000468385 MAP3K10Q02779 954 aa16.29■□□□□ 0.2
PTPN7-207ENST00000468385 DPF3Q92784 378 aa16.29■□□□□ 0.2
PTPN7-207ENST00000468385 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
PTPN7-207ENST00000468385 GABRQQ9UN88 632 aa16.29■□□□□ 0.2
PTPN7-207ENST00000468385 PA2G4Q9UQ80 394 aaKnown RBP16.29■□□□□ 0.2
PTPN7-207ENST00000468385 AFG3L2Q9Y4W6 797 aa16.29■□□□□ 0.2
PTPN7-207ENST00000468385 ZHX2Q9Y6X8 837 aa16.29■□□□□ 0.2
PTPN7-207ENST00000468385 DOCK2Q92608 1830 aa16.29■□□□□ 0.2
PTPN7-207ENST00000468385 UBXN2AP68543 259 aa16.28■□□□□ 0.2
PTPN7-207ENST00000468385 CCDC102BQ68D86 513 aa16.28■□□□□ 0.2
PTPN7-207ENST00000468385 FASTKD5Q7L8L6 764 aaKnown RBP16.28■□□□□ 0.2
PTPN7-207ENST00000468385 RNF208Q9H0X6 261 aa16.28■□□□□ 0.2
PTPN7-207ENST00000468385 SMC4Q9NTJ3 1288 aa16.28■□□□□ 0.2
PTPN7-207ENST00000468385 DDTLA6NHG4 134 aaPredicted RBP16.27■□□□□ 0.2
PTPN7-207ENST00000468385 ZGPATQ8N5A5 531 aaKnown RBP16.27■□□□□ 0.2
PTPN7-207ENST00000468385 SLAIN1Q8ND83 568 aa16.27■□□□□ 0.2
PTPN7-207ENST00000468385 COPRSQ9NQ92 184 aa16.27■□□□□ 0.2
PTPN7-207ENST00000468385 DDX4Q9NQI0 724 aaKnown RBP16.27■□□□□ 0.2
PTPN7-207ENST00000468385 PICK1Q9NRD5 415 aa16.27■□□□□ 0.2
PTPN7-207ENST00000468385 RBM27Q9P2N5 1060 aaKnown RBP16.27■□□□□ 0.2
PTPN7-207ENST00000468385 BIN2Q9UBW5 565 aaPredicted RBP16.27■□□□□ 0.2
PTPN7-207ENST00000468385 SLC45A1Q9Y2W3 748 aa16.27■□□□□ 0.2
PTPN7-207ENST00000468385 LRRFIP2Q9Y608 721 aaKnown RBP16.27■□□□□ 0.2
PTPN7-207ENST00000468385 MYH2Q9UKX2 1941 aa16.27■□□□□ 0.19
PTPN7-207ENST00000468385 MGAMO43451 1857 aa16.27■□□□□ 0.19
PTPN7-207ENST00000468385 RASGRF1Q13972 1273 aa16.26■□□□□ 0.19
PTPN7-207ENST00000468385 GADL1Q6ZQY3 521 aa16.26■□□□□ 0.19
PTPN7-207ENST00000468385 U2AF1L4Q8WU68 220 aaKnown RBP16.26■□□□□ 0.19
PTPN7-207ENST00000468385 FAM163AQ96GL9 167 aaPredicted RBP16.26■□□□□ 0.19
PTPN7-207ENST00000468385 CDCA7LQ96GN5 454 aa16.26■□□□□ 0.19
PTPN7-207ENST00000468385 UNC93B1Q9H1C4 597 aa16.26■□□□□ 0.19
PTPN7-207ENST00000468385 PDS5AQ29RF7 1337 aaKnown RBP16.25■□□□□ 0.19
PTPN7-207ENST00000468385 FLT3LGP49771 235 aa16.25■□□□□ 0.19
PTPN7-207ENST00000468385 TIMM10P62072 90 aa16.25■□□□□ 0.19
PTPN7-207ENST00000468385 DZIP1Q86YF9 867 aaKnown RBP16.25■□□□□ 0.19
PTPN7-207ENST00000468385 ZSCAN29Q8IWY8 852 aaPredicted RBP16.25■□□□□ 0.19
PTPN7-207ENST00000468385 HTATIP2Q9BUP3 242 aa16.25■□□□□ 0.19
PTPN7-207ENST00000468385 PRO3102Q9H379 93 aa16.25■□□□□ 0.19
PTPN7-207ENST00000468385 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.25■□□□□ 0.19
PTPN7-207ENST00000468385 ABCF2Q9UG63 623 aa16.25■□□□□ 0.19
PTPN7-207ENST00000468385 NOB1Q9ULX3 412 aaKnown RBP16.25■□□□□ 0.19
PTPN7-207ENST00000468385 PHIPQ8WWQ0 1821 aa16.24■□□□□ 0.19
PTPN7-207ENST00000468385 PTPRFP10586 1907 aa16.24■□□□□ 0.19
PTPN7-207ENST00000468385 ADCY3O60266 1144 aa16.24■□□□□ 0.19
PTPN7-207ENST00000468385 CTNND1O60716 968 aaKnown RBP16.24■□□□□ 0.19
PTPN7-207ENST00000468385 SGPL1O95470 568 aa16.24■□□□□ 0.19
PTPN7-207ENST00000468385 BTDP43251 543 aa16.24■□□□□ 0.19
PTPN7-207ENST00000468385 PICALMQ13492 652 aa16.24■□□□□ 0.19
PTPN7-207ENST00000468385 CCDC84Q86UT8 332 aaPredicted RBP16.24■□□□□ 0.19
PTPN7-207ENST00000468385 TRMT2AQ8IZ69 625 aaKnown RBP16.24■□□□□ 0.19
PTPN7-207ENST00000468385 DOCK1Q14185 1865 aa16.24■□□□□ 0.19
PTPN7-207ENST00000468385 RANBP2P49792 3224 aaKnown RBP16.24■□□□□ 0.19
PTPN7-207ENST00000468385 TRIOBPQ9H2D6 2365 aa16.23■□□□□ 0.19
PTPN7-207ENST00000468385 MROH7-TTC4A0A0A0MT08 1334 aa16.23■□□□□ 0.19
PTPN7-207ENST00000468385 CEP290O15078 2479 aa16.23■□□□□ 0.19
PTPN7-207ENST00000468385 FARP2O94887 1054 aaPredicted RBP16.23■□□□□ 0.19
PTPN7-207ENST00000468385 INHAP05111 366 aa16.23■□□□□ 0.19
PTPN7-207ENST00000468385 ELNP15502 786 aa16.23■□□□□ 0.19
PTPN7-207ENST00000468385 RHBDL3P58872 404 aa16.23■□□□□ 0.19
PTPN7-207ENST00000468385 SLF2Q8IX21 1173 aa16.23■□□□□ 0.19
PTPN7-207ENST00000468385 PXYLP1Q8TE99 480 aa16.23■□□□□ 0.19
PTPN7-207ENST00000468385 ZNF384Q8TF68 577 aa16.23■□□□□ 0.19
PTPN7-207ENST00000468385 MEIS3Q99687 375 aa16.23■□□□□ 0.19
PTPN7-207ENST00000468385 GPR75-ASB3A0A0A6YYF3 556 aa16.22■□□□□ 0.19
PTPN7-207ENST00000468385 A0A1B0GUL7 405 aa16.22■□□□□ 0.19
PTPN7-207ENST00000468385 TRIM75PA6NK02 468 aa16.22■□□□□ 0.19
PTPN7-207ENST00000468385 TNPO2O14787 897 aaKnown RBP16.22■□□□□ 0.19
PTPN7-207ENST00000468385 IRF5Q13568 498 aa16.22■□□□□ 0.19
PTPN7-207ENST00000468385 SPTY2D1Q68D10 685 aaPredicted RBP16.22■□□□□ 0.19
PTPN7-207ENST00000468385 SMCR8Q8TEV9 937 aaPredicted RBP16.22■□□□□ 0.19
PTPN7-207ENST00000468385 XAGE2Q96GT9 111 aa16.22■□□□□ 0.19
PTPN7-207ENST00000468385 API5Q9BZZ5 524 aaKnown RBP16.22■□□□□ 0.19
PTPN7-207ENST00000468385 AGTPBP1Q9UPW5 1226 aa16.22■□□□□ 0.19
PTPN7-207ENST00000468385 HDAC5Q9UQL6 1122 aa16.22■□□□□ 0.19
PTPN7-207ENST00000468385 ZBTB7BO15156 539 aaPredicted RBP16.21■□□□□ 0.19
PTPN7-207ENST00000468385 TBC1D12O60347 775 aa16.21■□□□□ 0.19
PTPN7-207ENST00000468385 MECOMQ03112 1051 aa16.21■□□□□ 0.19
PTPN7-207ENST00000468385 TREML2Q5T2D2 321 aa16.21■□□□□ 0.19
PTPN7-207ENST00000468385 NR2E3Q9Y5X4 410 aa16.21■□□□□ 0.19
PTPN7-207ENST00000468385 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.21■□□□□ 0.19
PTPN7-207ENST00000468385 FAM196BA6NMK8 535 aa16.2■□□□□ 0.18
PTPN7-207ENST00000468385 CT47B1P0C2W7 299 aaPredicted RBP16.2■□□□□ 0.18
PTPN7-207ENST00000468385 TFCP2Q12800 502 aa16.2■□□□□ 0.18
PTPN7-207ENST00000468385 ERICH6Q7L0X2 663 aa16.2■□□□□ 0.18
PTPN7-207ENST00000468385 ANKRD13CQ8N6S4 541 aa16.2■□□□□ 0.18
PTPN7-207ENST00000468385 PAK6Q9NQU5 681 aaPredicted RBP16.2■□□□□ 0.18
PTPN7-207ENST00000468385 MVPQ14764 893 aaKnown RBP16.19■□□□□ 0.18
PTPN7-207ENST00000468385 FAM110CQ1W6H9 321 aa16.19■□□□□ 0.18
PTPN7-207ENST00000468385 NSUN4Q96CB9 384 aaKnown RBP16.19■□□□□ 0.18
PTPN7-207ENST00000468385 DEFB118Q96PH6 123 aa16.19■□□□□ 0.18
PTPN7-207ENST00000468385 OSBPL5Q9H0X9 879 aaPredicted RBP16.19■□□□□ 0.18
PTPN7-207ENST00000468385 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.19■□□□□ 0.18
PTPN7-207ENST00000468385 HMG20BQ9P0W2 317 aa16.19■□□□□ 0.18
PTPN7-207ENST00000468385 AKAP2Q9Y2D5 859 aa16.19■□□□□ 0.18
PTPN7-207ENST00000468385 SRGAP3O43295 1099 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms