RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 USP17L8P0C7I0 530 aa7.15□□□□□ -1.26
USP39-213ENST00000467885 HSPD1P10809 573 aaKnown RBP7.15□□□□□ -1.26
USP39-213ENST00000467885 CRKP46108 304 aa7.15□□□□□ -1.26
USP39-213ENST00000467885 MMP14P50281 582 aa7.15□□□□□ -1.26
USP39-213ENST00000467885 EIF6P56537 245 aaKnown RBP7.15□□□□□ -1.26
USP39-213ENST00000467885 GSTO1P78417 241 aa7.15□□□□□ -1.26
USP39-213ENST00000467885 CDC42EP5Q6NZY7 148 aa7.15□□□□□ -1.26
USP39-213ENST00000467885 CASC1Q6TDU7 716 aa7.15□□□□□ -1.26
USP39-213ENST00000467885 MIGA1Q8NAN2 632 aa7.15□□□□□ -1.26
USP39-213ENST00000467885 MTMR14Q8NCE2 650 aa7.15□□□□□ -1.26
USP39-213ENST00000467885 FBXW7Q969H0 707 aa7.15□□□□□ -1.26
USP39-213ENST00000467885 ZDHHC15Q96MV8 337 aa7.15□□□□□ -1.26
USP39-213ENST00000467885 KIF2CQ99661 725 aa7.15□□□□□ -1.26
USP39-213ENST00000467885 MFRPQ9BY79 579 aa7.15□□□□□ -1.26
USP39-213ENST00000467885 ARMT1Q9H993 441 aa7.15□□□□□ -1.26
USP39-213ENST00000467885 RNF181Q9P0P0 153 aa7.15□□□□□ -1.26
USP39-213ENST00000467885 CNOT7Q9UIV1 285 aaKnown RBP7.15□□□□□ -1.26
USP39-213ENST00000467885 SERPINA10Q9UK55 444 aa7.15□□□□□ -1.26
USP39-213ENST00000467885 GAKO14976 1311 aa7.15□□□□□ -1.26
USP39-213ENST00000467885 MAST3O60307 1309 aa7.15□□□□□ -1.26
USP39-213ENST00000467885 C2orf72A6NCS6 295 aa7.14□□□□□ -1.27
USP39-213ENST00000467885 POTECB2RU33 542 aa7.14□□□□□ -1.27
USP39-213ENST00000467885 NUDT7P0C024 238 aa7.14□□□□□ -1.27
USP39-213ENST00000467885 RPS12P25398 132 aaKnown RBP7.14□□□□□ -1.27
USP39-213ENST00000467885 GMPSP49915 693 aaPredicted RBP7.14□□□□□ -1.27
USP39-213ENST00000467885 RFX7Q2KHR2 1363 aa7.14□□□□□ -1.27
USP39-213ENST00000467885 TSGA10IPQ3SY00 556 aa7.14□□□□□ -1.27
USP39-213ENST00000467885 KIAA1211Q6ZU35 1233 aa7.14□□□□□ -1.27
USP39-213ENST00000467885 DZIP1Q86YF9 867 aaKnown RBP7.14□□□□□ -1.27
USP39-213ENST00000467885 SLF2Q8IX21 1173 aa7.14□□□□□ -1.27
USP39-213ENST00000467885 IFNL3Q8IZI9 196 aa7.14□□□□□ -1.27
USP39-213ENST00000467885 GPC2Q8N158 579 aa7.14□□□□□ -1.27
USP39-213ENST00000467885 LCORLQ8N3X6 602 aa7.14□□□□□ -1.27
USP39-213ENST00000467885 SH3RF3Q8TEJ3 882 aaPredicted RBP7.14□□□□□ -1.27
USP39-213ENST00000467885 DSCC1Q9BVC3 393 aa7.14□□□□□ -1.27
USP39-213ENST00000467885 ZNF541Q9H0D2 1346 aa7.14□□□□□ -1.27
USP39-213ENST00000467885 USP40Q9NVE5 1235 aa7.14□□□□□ -1.27
USP39-213ENST00000467885 AATFQ9NY61 560 aaKnown RBP eCLIP7.14□□□□□ -1.27
USP39-213ENST00000467885 AKAP11Q9UKA4 1901 aa7.14□□□□□ -1.27
USP39-213ENST00000467885 DAGLAQ9Y4D2 1042 aa7.14□□□□□ -1.27
USP39-213ENST00000467885 GJA3Q9Y6H8 435 aa7.14□□□□□ -1.27
USP39-213ENST00000467885 MROH7-TTC4A0A0A0MT08 1334 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 CCDC171Q6TFL3 1326 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 MYO3BQ8WXR4 1341 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 GLTPD2A6NH11 291 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 SMIM22K7EJ46 135 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 WDHD1O75717 1129 aaPredicted RBP7.13□□□□□ -1.27
USP39-213ENST00000467885 REC8O95072 547 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 MBD4O95243 580 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 BAG3O95817 575 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 EGFRP00533 1210 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 GNAT2P19087 354 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 HSPA4P34932 840 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 EPS15P42566 896 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 BTDP43251 543 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 RBM25P49756 843 aaKnown RBP7.13□□□□□ -1.27
USP39-213ENST00000467885 HIRAP54198 1017 aaPredicted RBP7.13□□□□□ -1.27
USP39-213ENST00000467885 MFAP1P55081 439 aaKnown RBP7.13□□□□□ -1.27
USP39-213ENST00000467885 CFAP100Q494V2 611 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 POTEEQ6S8J3 1075 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 SAMD7Q7Z3H4 446 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 ZFPM1Q8IX07 1006 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 OGFOD1Q8N543 542 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 TEKT1Q969V4 418 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 AIDAQ96BJ3 306 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 IL17RAQ96F46 866 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 TDRD3Q9H7E2 651 aaKnown RBP7.13□□□□□ -1.27
USP39-213ENST00000467885 TSHZ2Q9NRE2 1034 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 TACC3Q9Y6A5 838 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 STK24Q9Y6E0 443 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 TAF6LQ9Y6J9 622 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 SLC4A4Q9Y6R1 1079 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 DLEC1Q9Y238 1755 aa7.13□□□□□ -1.27
USP39-213ENST00000467885 GOLGB1Q14789 3259 aaKnown RBP7.12□□□□□ -1.27
USP39-213ENST00000467885 RAD50Q92878 1312 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 USP17L12C9JPN9 530 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 USP17L21D6R901 530 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 WNT10BO00744 389 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 EIF5BO60841 1220 aaKnown RBP7.12□□□□□ -1.27
USP39-213ENST00000467885 CYP21A2P08686 494 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 PBX2P40425 430 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 DLGAP5Q15398 846 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 NBPF9Q3BBW0 867 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 SBK1Q52WX2 424 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 RBM26Q5T8P6 1007 aaKnown RBP7.12□□□□□ -1.27
USP39-213ENST00000467885 CREB3L3Q68CJ9 461 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 GIMAP6Q6P9H5 292 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 CTR9Q6PD62 1173 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 NKX2-3Q8TAU0 364 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 TGFBRAP1Q8WUH2 860 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 SDR42E1Q8WUS8 393 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 TBC1D32Q96NH3 1257 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 IDI2Q9BXS1 227 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 C22orf23Q9BZE7 217 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 EPB41L4AQ9HCS5 686 aaPredicted RBP7.12□□□□□ -1.27
USP39-213ENST00000467885 MYOZ2Q9NPC6 264 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 DCP1AQ9NPI6 582 aaPredicted RBP7.12□□□□□ -1.27
USP39-213ENST00000467885 ANO2Q9NQ90 1003 aa7.12□□□□□ -1.27
USP39-213ENST00000467885 DDX4Q9NQI0 724 aaKnown RBP7.12□□□□□ -1.27
USP39-213ENST00000467885 INCENPQ9NQS7 918 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms