RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 CXCL11O14625 94 aa21.36■■□□□ 1.01
TRIM56-203ENST00000467847 MTX1Q13505 466 aa21.36■■□□□ 1.01
TRIM56-203ENST00000467847 PICK1Q9NRD5 415 aa21.36■■□□□ 1.01
TRIM56-203ENST00000467847 ADGRA2Q96PE1 1338 aa21.35■■□□□ 1.01
TRIM56-203ENST00000467847 IPO8O15397 1037 aaKnown RBP21.35■■□□□ 1.01
TRIM56-203ENST00000467847 BTDP43251 543 aa21.35■■□□□ 1.01
TRIM56-203ENST00000467847 PSMC4P43686 418 aa21.35■■□□□ 1.01
TRIM56-203ENST00000467847 PICALMQ13492 652 aa21.35■■□□□ 1.01
TRIM56-203ENST00000467847 SH3BP5LQ7L8J4 393 aa21.35■■□□□ 1.01
TRIM56-203ENST00000467847 SCYL3Q8IZE3 742 aa21.35■■□□□ 1.01
TRIM56-203ENST00000467847 FAM163AQ96GL9 167 aaPredicted RBP21.35■■□□□ 1.01
TRIM56-203ENST00000467847 TRIM47Q96LD4 638 aa21.35■■□□□ 1.01
TRIM56-203ENST00000467847 NEUROD6Q96NK8 337 aa21.35■■□□□ 1.01
TRIM56-203ENST00000467847 PARK7Q99497 189 aaKnown RBP21.35■■□□□ 1.01
TRIM56-203ENST00000467847 ZHX2Q9Y6X8 837 aa21.35■■□□□ 1.01
TRIM56-203ENST00000467847 DOCK1Q14185 1865 aa21.35■■□□□ 1.01
TRIM56-203ENST00000467847 MROH7-TTC4A0A0A0MT08 1334 aa21.34■■□□□ 1.01
TRIM56-203ENST00000467847 CTGFP29279 349 aa21.34■■□□□ 1.01
TRIM56-203ENST00000467847 ERICH6Q7L0X2 663 aa21.34■■□□□ 1.01
TRIM56-203ENST00000467847 DDX4Q9NQI0 724 aaKnown RBP21.34■■□□□ 1.01
TRIM56-203ENST00000467847 DDTLA6NHG4 134 aaPredicted RBP21.33■■□□□ 1.01
TRIM56-203ENST00000467847 FMNL1O95466 1100 aaPredicted RBP21.33■■□□□ 1.01
TRIM56-203ENST00000467847 TRIM27P14373 513 aa21.33■■□□□ 1.01
TRIM56-203ENST00000467847 PTPRAP18433 802 aa21.33■■□□□ 1.01
TRIM56-203ENST00000467847 HOXD10P28358 340 aa21.33■■□□□ 1.01
TRIM56-203ENST00000467847 MECOMQ03112 1051 aa21.33■■□□□ 1.01
TRIM56-203ENST00000467847 GORABQ5T7V8 394 aa21.33■■□□□ 1.01
TRIM56-203ENST00000467847 GPAT2Q6NUI2 795 aa21.33■■□□□ 1.01
TRIM56-203ENST00000467847 FRAT1Q92837 279 aaPredicted RBP21.33■■□□□ 1.01
TRIM56-203ENST00000467847 SRRDQ9UH36 339 aa21.33■■□□□ 1.01
TRIM56-203ENST00000467847 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.33■■□□□ 1.01
TRIM56-203ENST00000467847 PTPRFP10586 1907 aa21.33■■□□□ 1
TRIM56-203ENST00000467847 MGAMO43451 1857 aa21.32■■□□□ 1
TRIM56-203ENST00000467847 GNAI2P04899 355 aa21.32■■□□□ 1
TRIM56-203ENST00000467847 CYP2C8P10632 490 aa21.32■■□□□ 1
TRIM56-203ENST00000467847 OSBPP22059 807 aa21.32■■□□□ 1
TRIM56-203ENST00000467847 FASTKD5Q7L8L6 764 aaKnown RBP21.32■■□□□ 1
TRIM56-203ENST00000467847 PHIPQ8WWQ0 1821 aa21.32■■□□□ 1
TRIM56-203ENST00000467847 CEP290O15078 2479 aa21.31■■□□□ 1
TRIM56-203ENST00000467847 GPR75-ASB3A0A0A6YYF3 556 aa21.31■■□□□ 1
TRIM56-203ENST00000467847 A0A0G2JLL6 359 aaPredicted RBP21.31■■□□□ 1
TRIM56-203ENST00000467847 MAP3K10Q02779 954 aa21.31■■□□□ 1
TRIM56-203ENST00000467847 ATF7IPQ6VMQ6 1270 aa21.31■■□□□ 1
TRIM56-203ENST00000467847 GADL1Q6ZQY3 521 aa21.31■■□□□ 1
TRIM56-203ENST00000467847 PRRT2Q7Z6L0 340 aaPredicted RBP21.31■■□□□ 1
TRIM56-203ENST00000467847 SPATA5Q8NB90 893 aa21.31■■□□□ 1
TRIM56-203ENST00000467847 RAET1EQ8TD07 263 aa21.31■■□□□ 1
TRIM56-203ENST00000467847 HMG20BQ9P0W2 317 aa21.31■■□□□ 1
TRIM56-203ENST00000467847 TNNQ9UQP3 1299 aa21.31■■□□□ 1
TRIM56-203ENST00000467847 AFG3L2Q9Y4W6 797 aa21.31■■□□□ 1
TRIM56-203ENST00000467847 MYPNQ86TC9 1320 aa21.3■■□□□ 1
TRIM56-203ENST00000467847 H0YGN5 161 aa21.3■■□□□ 1
TRIM56-203ENST00000467847 CTNND1O60716 968 aaKnown RBP21.3■■□□□ 1
TRIM56-203ENST00000467847 BCAR3O75815 825 aa21.3■■□□□ 1
TRIM56-203ENST00000467847 SLURP2P0DP57 97 aa21.3■■□□□ 1
TRIM56-203ENST00000467847 GSTO1P78417 241 aa21.3■■□□□ 1
TRIM56-203ENST00000467847 PI16Q6UXB8 463 aa21.3■■□□□ 1
TRIM56-203ENST00000467847 ZNF384Q8TF68 577 aa21.3■■□□□ 1
TRIM56-203ENST00000467847 BCRP11274 1271 aa21.29■■□□□ 1
TRIM56-203ENST00000467847 FCGRTP55899 365 aa21.29■■□□□ 1
TRIM56-203ENST00000467847 RHBDL3P58872 404 aa21.29■■□□□ 1
TRIM56-203ENST00000467847 G3BP1Q13283 466 aaKnown RBP eCLIP21.29■■□□□ 1
TRIM56-203ENST00000467847 CLUAP1Q96AJ1 413 aa21.29■■□□□ 1
TRIM56-203ENST00000467847 PNMA6EA0A0J9YXQ4 647 aa21.28■■□□□ 1
TRIM56-203ENST00000467847 TRIM75PA6NK02 468 aa21.28■■□□□ 1
TRIM56-203ENST00000467847 LDHCP07864 332 aa21.28■■□□□ 1
TRIM56-203ENST00000467847 ARID4AP29374 1257 aaPredicted RBP21.28■■□□□ 1
TRIM56-203ENST00000467847 GRK4P32298 578 aa21.28■■□□□ 1
TRIM56-203ENST00000467847 TBC1D9Q6ZT07 1266 aa21.28■■□□□ 1
TRIM56-203ENST00000467847 NSUN4Q96CB9 384 aaKnown RBP21.28■■□□□ 1
TRIM56-203ENST00000467847 RAI14Q9P0K7 980 aa21.28■■□□□ 1
TRIM56-203ENST00000467847 SLC45A1Q9Y2W3 748 aa21.28■■□□□ 1
TRIM56-203ENST00000467847 NPM3O75607 178 aaKnown RBP21.27■■□□□ 1
TRIM56-203ENST00000467847 MTFR1Q15390 333 aa21.27■■□□□ 1
TRIM56-203ENST00000467847 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.27■■□□□ 1
TRIM56-203ENST00000467847 TBC1D12O60347 775 aa21.26■□□□□ 0.99
TRIM56-203ENST00000467847 MAP4K4O95819 1239 aaPredicted RBP21.26■□□□□ 0.99
TRIM56-203ENST00000467847 PRKCZQ05513 592 aa21.26■□□□□ 0.99
TRIM56-203ENST00000467847 CHRDL2Q6WN34 429 aa21.26■□□□□ 0.99
TRIM56-203ENST00000467847 SMCR8Q8TEV9 937 aaPredicted RBP21.26■□□□□ 0.99
TRIM56-203ENST00000467847 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.26■□□□□ 0.99
TRIM56-203ENST00000467847 BIN2Q9UBW5 565 aaPredicted RBP21.26■□□□□ 0.99
TRIM56-203ENST00000467847 ATAD5Q96QE3 1844 aa21.26■□□□□ 0.99
TRIM56-203ENST00000467847 FAM196BA6NMK8 535 aa21.25■□□□□ 0.99
TRIM56-203ENST00000467847 UQCRFS1P1P0C7P4 283 aa21.25■□□□□ 0.99
TRIM56-203ENST00000467847 MCAMP43121 646 aa21.25■□□□□ 0.99
TRIM56-203ENST00000467847 CCDC84Q86UT8 332 aaPredicted RBP21.25■□□□□ 0.99
TRIM56-203ENST00000467847 LRP2BPQ9P2M1 347 aa21.25■□□□□ 0.99
TRIM56-203ENST00000467847 COL2A1P02458 1487 aaPredicted RBP21.25■□□□□ 0.99
TRIM56-203ENST00000467847 CCL5P13501 91 aa21.24■□□□□ 0.99
TRIM56-203ENST00000467847 TMEM57Q8N5G2 664 aa21.24■□□□□ 0.99
TRIM56-203ENST00000467847 DPF3Q92784 378 aa21.24■□□□□ 0.99
TRIM56-203ENST00000467847 SHISA4Q96DD7 197 aa21.24■□□□□ 0.99
TRIM56-203ENST00000467847 OSBPL5Q9H0X9 879 aaPredicted RBP21.24■□□□□ 0.99
TRIM56-203ENST00000467847 UBXN2AP68543 259 aa21.23■□□□□ 0.99
TRIM56-203ENST00000467847 ZKSCAN2Q63HK3 967 aa21.23■□□□□ 0.99
TRIM56-203ENST00000467847 TEX11Q8IYF3 940 aa21.23■□□□□ 0.99
TRIM56-203ENST00000467847 SLAIN1Q8ND83 568 aa21.23■□□□□ 0.99
TRIM56-203ENST00000467847 NKX2-3Q8TAU0 364 aa21.23■□□□□ 0.99
TRIM56-203ENST00000467847 GABRQQ9UN88 632 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms