RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 HTTP42858 3142 aa17.76■□□□□ 0.43
RB1-202ENST00000467505 SLC4A8Q2Y0W8 1093 aa17.76■□□□□ 0.43
RB1-202ENST00000467505 ZKSCAN2Q63HK3 967 aa17.76■□□□□ 0.43
RB1-202ENST00000467505 C17orf99Q6UX52 265 aa17.76■□□□□ 0.43
RB1-202ENST00000467505 KIAA0100Q14667 2235 aaKnown RBP17.76■□□□□ 0.43
RB1-202ENST00000467505 RFX7Q2KHR2 1363 aa17.76■□□□□ 0.43
RB1-202ENST00000467505 NPM3O75607 178 aaKnown RBP17.75■□□□□ 0.43
RB1-202ENST00000467505 UQCRFS1P1P0C7P4 283 aa17.75■□□□□ 0.43
RB1-202ENST00000467505 CAP1Q01518 475 aa17.75■□□□□ 0.43
RB1-202ENST00000467505 MECOMQ03112 1051 aa17.75■□□□□ 0.43
RB1-202ENST00000467505 PICALMQ13492 652 aa17.75■□□□□ 0.43
RB1-202ENST00000467505 ZFPM1Q8IX07 1006 aa17.75■□□□□ 0.43
RB1-202ENST00000467505 SPATA5Q8NB90 893 aa17.75■□□□□ 0.43
RB1-202ENST00000467505 CLUAP1Q96AJ1 413 aa17.75■□□□□ 0.43
RB1-202ENST00000467505 NOL10Q9BSC4 688 aaKnown RBP17.75■□□□□ 0.43
RB1-202ENST00000467505 ATRNL1Q5VV63 1379 aa17.75■□□□□ 0.43
RB1-202ENST00000467505 GPR75-ASB3A0A0A6YYF3 556 aa17.74■□□□□ 0.43
RB1-202ENST00000467505 CTNND1O60716 968 aaKnown RBP17.74■□□□□ 0.43
RB1-202ENST00000467505 BCAR3O75815 825 aa17.74■□□□□ 0.43
RB1-202ENST00000467505 ARID4AP29374 1257 aaPredicted RBP17.74■□□□□ 0.43
RB1-202ENST00000467505 MAP3K10Q02779 954 aa17.74■□□□□ 0.43
RB1-202ENST00000467505 HMG20BQ9P0W2 317 aa17.74■□□□□ 0.43
RB1-202ENST00000467505 CPA4Q9UI42 421 aa17.74■□□□□ 0.43
RB1-202ENST00000467505 ZHX2Q9Y6X8 837 aa17.74■□□□□ 0.43
RB1-202ENST00000467505 ZSWIM8A7E2V4 1837 aa17.74■□□□□ 0.43
RB1-202ENST00000467505 PHF20L1A8MW92 1017 aa17.73■□□□□ 0.43
RB1-202ENST00000467505 FMNL1O95466 1100 aaPredicted RBP17.73■□□□□ 0.43
RB1-202ENST00000467505 PTPRAP18433 802 aa17.73■□□□□ 0.43
RB1-202ENST00000467505 PSMC4P43686 418 aa17.73■□□□□ 0.43
RB1-202ENST00000467505 RAI14Q9P0K7 980 aa17.73■□□□□ 0.43
RB1-202ENST00000467505 SLC45A1Q9Y2W3 748 aa17.73■□□□□ 0.43
RB1-202ENST00000467505 PTPRFP10586 1907 aa17.72■□□□□ 0.43
RB1-202ENST00000467505 MGAMO43451 1857 aa17.72■□□□□ 0.43
RB1-202ENST00000467505 COL2A1P02458 1487 aaPredicted RBP17.72■□□□□ 0.43
RB1-202ENST00000467505 A0A0G2JLL6 359 aaPredicted RBP17.72■□□□□ 0.43
RB1-202ENST00000467505 PNMA6EA0A0J9YXQ4 647 aa17.72■□□□□ 0.43
RB1-202ENST00000467505 TBC1D12O60347 775 aa17.72■□□□□ 0.43
RB1-202ENST00000467505 EN2P19622 333 aaPredicted RBP17.72■□□□□ 0.43
RB1-202ENST00000467505 OS9Q13438 667 aaPredicted RBP17.72■□□□□ 0.43
RB1-202ENST00000467505 PRRT2Q7Z6L0 340 aaPredicted RBP17.72■□□□□ 0.43
RB1-202ENST00000467505 RAET1EQ8TD07 263 aa17.72■□□□□ 0.43
RB1-202ENST00000467505 ARHGAP39Q9C0H5 1083 aa17.72■□□□□ 0.43
RB1-202ENST00000467505 GPR108Q9NPR9 543 aa17.72■□□□□ 0.43
RB1-202ENST00000467505 LRP2BPQ9P2M1 347 aa17.72■□□□□ 0.43
RB1-202ENST00000467505 SRRDQ9UH36 339 aa17.72■□□□□ 0.43
RB1-202ENST00000467505 ADGRA2Q96PE1 1338 aa17.72■□□□□ 0.43
RB1-202ENST00000467505 MAST2Q6P0Q8 1798 aa17.71■□□□□ 0.43
RB1-202ENST00000467505 CENPFP49454 3210 aa17.71■□□□□ 0.43
RB1-202ENST00000467505 DDTLA6NHG4 134 aaPredicted RBP17.71■□□□□ 0.43
RB1-202ENST00000467505 IGSF3O75054 1194 aa17.71■□□□□ 0.43
RB1-202ENST00000467505 FCGRTP55899 365 aa17.71■□□□□ 0.43
RB1-202ENST00000467505 MOGSQ13724 837 aa17.71■□□□□ 0.43
RB1-202ENST00000467505 CCDC158Q5M9N0 1113 aa17.71■□□□□ 0.43
RB1-202ENST00000467505 GADL1Q6ZQY3 521 aa17.71■□□□□ 0.43
RB1-202ENST00000467505 SH3BP5LQ7L8J4 393 aa17.71■□□□□ 0.43
RB1-202ENST00000467505 FTSJ3Q8IY81 847 aaKnown RBP17.71■□□□□ 0.43
RB1-202ENST00000467505 TMEM57Q8N5G2 664 aa17.71■□□□□ 0.43
RB1-202ENST00000467505 SH3TC2Q8TF17 1288 aa17.71■□□□□ 0.43
RB1-202ENST00000467505 NSUN4Q96CB9 384 aaKnown RBP17.71■□□□□ 0.43
RB1-202ENST00000467505 TBC1D2Q9BYX2 928 aa17.71■□□□□ 0.43
RB1-202ENST00000467505 DDX4Q9NQI0 724 aaKnown RBP17.71■□□□□ 0.43
RB1-202ENST00000467505 PCDH10Q9P2E7 1040 aa17.71■□□□□ 0.43
RB1-202ENST00000467505 AFG3L2Q9Y4W6 797 aa17.71■□□□□ 0.43
RB1-202ENST00000467505 PHIPQ8WWQ0 1821 aa17.7■□□□□ 0.42
RB1-202ENST00000467505 BAG3O95817 575 aa17.7■□□□□ 0.42
RB1-202ENST00000467505 RHBDL3P58872 404 aa17.7■□□□□ 0.42
RB1-202ENST00000467505 TTC39AQ5SRH9 613 aa17.7■□□□□ 0.42
RB1-202ENST00000467505 GPAT2Q6NUI2 795 aa17.7■□□□□ 0.42
RB1-202ENST00000467505 TRIM47Q96LD4 638 aa17.7■□□□□ 0.42
RB1-202ENST00000467505 OSBPL5Q9H0X9 879 aaPredicted RBP17.7■□□□□ 0.42
RB1-202ENST00000467505 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.7■□□□□ 0.42
RB1-202ENST00000467505 ATAD5Q96QE3 1844 aa17.7■□□□□ 0.42
RB1-202ENST00000467505 MYPNQ86TC9 1320 aa17.7■□□□□ 0.42
RB1-202ENST00000467505 BCRP11274 1271 aa17.69■□□□□ 0.42
RB1-202ENST00000467505 PLCG2P16885 1265 aa17.69■□□□□ 0.42
RB1-202ENST00000467505 OSBPP22059 807 aa17.69■□□□□ 0.42
RB1-202ENST00000467505 HNRNPUQ00839 825 aaKnown RBP eCLIP17.69■□□□□ 0.42
RB1-202ENST00000467505 NKX2-3Q8TAU0 364 aa17.69■□□□□ 0.42
RB1-202ENST00000467505 SMCR8Q8TEV9 937 aaPredicted RBP17.69■□□□□ 0.42
RB1-202ENST00000467505 PNMA3Q9UL41 463 aa17.69■□□□□ 0.42
RB1-202ENST00000467505 TNNQ9UQP3 1299 aa17.69■□□□□ 0.42
RB1-202ENST00000467505 ECM2O94769 699 aaPredicted RBP17.68■□□□□ 0.42
RB1-202ENST00000467505 MYCP01106 439 aaPredicted RBP17.68■□□□□ 0.42
RB1-202ENST00000467505 CYP2C8P10632 490 aa17.68■□□□□ 0.42
RB1-202ENST00000467505 GRK4P32298 578 aa17.68■□□□□ 0.42
RB1-202ENST00000467505 MCAMP43121 646 aa17.68■□□□□ 0.42
RB1-202ENST00000467505 UBXN2AP68543 259 aa17.68■□□□□ 0.42
RB1-202ENST00000467505 TNNI3KQ59H18 835 aa17.68■□□□□ 0.42
RB1-202ENST00000467505 PI16Q6UXB8 463 aa17.68■□□□□ 0.42
RB1-202ENST00000467505 TBC1D9Q6ZT07 1266 aa17.68■□□□□ 0.42
RB1-202ENST00000467505 TEX11Q8IYF3 940 aa17.68■□□□□ 0.42
RB1-202ENST00000467505 SSH3Q8TE77 659 aa17.68■□□□□ 0.42
RB1-202ENST00000467505 HERC5Q9UII4 1024 aaKnown RBP17.68■□□□□ 0.42
RB1-202ENST00000467505 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.68■□□□□ 0.42
RB1-202ENST00000467505 FPGT-TNNI3KV9GXZ4 949 aa17.68■□□□□ 0.42
RB1-202ENST00000467505 TRIM75PA6NK02 468 aa17.67■□□□□ 0.42
RB1-202ENST00000467505 SURF6O75683 361 aaKnown RBP17.67■□□□□ 0.42
RB1-202ENST00000467505 ATP8B2P98198 1209 aa17.67■□□□□ 0.42
RB1-202ENST00000467505 PABPC4Q13310 644 aaKnown RBP eCLIP17.67■□□□□ 0.42
RB1-202ENST00000467505 POLA2Q14181 598 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms