RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 DNAJC25Q9H1X3 360 aa7.77□□□□□ -1.17
SMC4-207ENST00000467263 MBNL3Q9NUK0 354 aaKnown RBP7.77□□□□□ -1.17
SMC4-207ENST00000467263 PLAGL2Q9UPG8 496 aa7.77□□□□□ -1.17
SMC4-207ENST00000467263 RNGTTO60942 597 aaKnown RBP7.76□□□□□ -1.17
SMC4-207ENST00000467263 RNASE1P07998 156 aaKnown RBP7.76□□□□□ -1.17
SMC4-207ENST00000467263 NETO1Q8TDF5 533 aa7.76□□□□□ -1.17
SMC4-207ENST00000467263 ATXN3LQ9H3M9 355 aa7.76□□□□□ -1.17
SMC4-207ENST00000467263 PATL2C9JE40 543 aaKnown RBP7.75□□□□□ -1.17
SMC4-207ENST00000467263 SLFN14P0C7P3 912 aa7.75□□□□□ -1.17
SMC4-207ENST00000467263 FUT4P22083 530 aa7.75□□□□□ -1.17
SMC4-207ENST00000467263 DTHD1Q6ZMT9 781 aa7.75□□□□□ -1.17
SMC4-207ENST00000467263 KCNB2Q92953 911 aa7.75□□□□□ -1.17
SMC4-207ENST00000467263 CITED4Q96RK1 184 aa7.75□□□□□ -1.17
SMC4-207ENST00000467263 DUSP23Q9BVJ7 150 aa7.75□□□□□ -1.17
SMC4-207ENST00000467263 GPN3Q9UHW5 284 aaPredicted RBP7.75□□□□□ -1.17
SMC4-207ENST00000467263 OXCT1P55809 520 aa7.74□□□□□ -1.17
SMC4-207ENST00000467263 ZNF124Q15973 351 aa7.74□□□□□ -1.17
SMC4-207ENST00000467263 UBE3DQ7Z6J8 389 aa7.74□□□□□ -1.17
SMC4-207ENST00000467263 STK11IPQ8N1F8 1099 aa7.74□□□□□ -1.17
SMC4-207ENST00000467263 ISL2Q96A47 359 aa7.74□□□□□ -1.17
SMC4-207ENST00000467263 RC3H2Q9HBD1 1191 aaKnown RBP7.74□□□□□ -1.17
SMC4-207ENST00000467263 KRT82Q9NSB4 513 aa7.74□□□□□ -1.17
SMC4-207ENST00000467263 TRAK1Q9UPV9 953 aa7.74□□□□□ -1.17
SMC4-207ENST00000467263 RBAK-RBAKDNI3L0D1 243 aa7.73□□□□□ -1.17
SMC4-207ENST00000467263 MAPK1P28482 360 aa7.73□□□□□ -1.17
SMC4-207ENST00000467263 LRRN4CLQ8ND94 238 aa7.73□□□□□ -1.17
SMC4-207ENST00000467263 BCO2Q9BYV7 579 aa7.73□□□□□ -1.17
SMC4-207ENST00000467263 TMEM39AQ9NV64 488 aa7.73□□□□□ -1.17
SMC4-207ENST00000467263 AOC3Q16853 763 aa7.72□□□□□ -1.17
SMC4-207ENST00000467263 ZC3H12AQ5D1E8 599 aaKnown RBP7.72□□□□□ -1.17
SMC4-207ENST00000467263 LCE4AQ5TA78 99 aa7.72□□□□□ -1.17
SMC4-207ENST00000467263 SULF2Q8IWU5 870 aa7.72□□□□□ -1.17
SMC4-207ENST00000467263 HOMEZQ8IX15 550 aa7.72□□□□□ -1.17
SMC4-207ENST00000467263 TOP6BLQ8N6T0 577 aa7.72□□□□□ -1.17
SMC4-207ENST00000467263 MISP3Q96FF7 219 aa7.72□□□□□ -1.17
SMC4-207ENST00000467263 HEXIM2Q96MH2 286 aaKnown RBP7.72□□□□□ -1.17
SMC4-207ENST00000467263 PRDM7Q9NQW5 492 aa7.72□□□□□ -1.17
SMC4-207ENST00000467263 DCTN4Q9UJW0 460 aa7.72□□□□□ -1.17
SMC4-207ENST00000467263 PRKCQQ04759 706 aa7.71□□□□□ -1.18
SMC4-207ENST00000467263 MAP1SQ66K74 1059 aaPredicted RBP7.71□□□□□ -1.18
SMC4-207ENST00000467263 NXPE4Q6UWF7 544 aa7.71□□□□□ -1.18
SMC4-207ENST00000467263 FAM214BQ7L5A3 538 aa7.71□□□□□ -1.18
SMC4-207ENST00000467263 TMC7Q7Z402 723 aa7.71□□□□□ -1.18
SMC4-207ENST00000467263 GPBAR1Q8TDU6 330 aa7.71□□□□□ -1.18
SMC4-207ENST00000467263 ALKBH8Q96BT7 664 aaKnown RBP7.71□□□□□ -1.18
SMC4-207ENST00000467263 RBCK1Q9BYM8 510 aa7.71□□□□□ -1.18
SMC4-207ENST00000467263 VAV3Q9UKW4 847 aa7.71□□□□□ -1.18
SMC4-207ENST00000467263 PCOLCE2Q9UKZ9 415 aa7.71□□□□□ -1.18
SMC4-207ENST00000467263 CEACAM5P06731 702 aa7.7□□□□□ -1.18
SMC4-207ENST00000467263 ITIH2P19823 946 aa7.7□□□□□ -1.18
SMC4-207ENST00000467263 NTF4P34130 210 aa7.7□□□□□ -1.18
SMC4-207ENST00000467263 ATG4DQ86TL0 474 aaPredicted RBP7.7□□□□□ -1.18
SMC4-207ENST00000467263 GRIN3AQ8TCU5 1115 aa7.7□□□□□ -1.18
SMC4-207ENST00000467263 FAM168AQ92567 244 aa7.7□□□□□ -1.18
SMC4-207ENST00000467263 AKAP2Q9Y2D5 859 aa7.7□□□□□ -1.18
SMC4-207ENST00000467263 CSADQ9Y600 493 aa7.7□□□□□ -1.18
SMC4-207ENST00000467263 ARNTP27540 789 aa7.69□□□□□ -1.18
SMC4-207ENST00000467263 ZNF252P-AS1Q0IIN9 211 aa7.69□□□□□ -1.18
SMC4-207ENST00000467263 IFI16Q16666 785 aaKnown RBP7.69□□□□□ -1.18
SMC4-207ENST00000467263 PPM1JQ5JR12 505 aa7.69□□□□□ -1.18
SMC4-207ENST00000467263 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.69□□□□□ -1.18
SMC4-207ENST00000467263 C3orf58Q8NDZ4 430 aa7.69□□□□□ -1.18
SMC4-207ENST00000467263 PI4K2BQ8TCG2 481 aa7.69□□□□□ -1.18
SMC4-207ENST00000467263 PAGE1O75459 146 aa7.68□□□□□ -1.18
SMC4-207ENST00000467263 PPP2R3AQ06190 1150 aa7.68□□□□□ -1.18
SMC4-207ENST00000467263 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.68□□□□□ -1.18
SMC4-207ENST00000467263 RASIP1Q5U651 963 aa7.68□□□□□ -1.18
SMC4-207ENST00000467263 RNF214Q8ND24 703 aa7.68□□□□□ -1.18
SMC4-207ENST00000467263 DMRTB1Q96MA1 342 aa7.68□□□□□ -1.18
SMC4-207ENST00000467263 SSU72Q9NP77 194 aaKnown RBP7.68□□□□□ -1.18
SMC4-207ENST00000467263 CACNA2D2Q9NY47 1150 aa7.68□□□□□ -1.18
SMC4-207ENST00000467263 BIN1O00499 593 aa7.67□□□□□ -1.18
SMC4-207ENST00000467263 ERVK-24P63145 666 aa7.67□□□□□ -1.18
SMC4-207ENST00000467263 SND1Q7KZF4 910 aaKnown RBP eCLIP7.67□□□□□ -1.18
SMC4-207ENST00000467263 HRASLS5Q96KN8 279 aa7.67□□□□□ -1.18
SMC4-207ENST00000467263 TNKS2Q9H2K2 1166 aa7.67□□□□□ -1.18
SMC4-207ENST00000467263 NLRP2Q9NX02 1062 aa7.67□□□□□ -1.18
SMC4-207ENST00000467263 NME2P22392 152 aa7.66□□□□□ -1.18
SMC4-207ENST00000467263 DSC3Q14574 896 aa7.66□□□□□ -1.18
SMC4-207ENST00000467263 SETDB2Q96T68 719 aa7.66□□□□□ -1.18
SMC4-207ENST00000467263 GZF1Q9H116 711 aaPredicted RBP7.66□□□□□ -1.18
SMC4-207ENST00000467263 MKNK2Q9HBH9 465 aa7.66□□□□□ -1.18
SMC4-207ENST00000467263 CBX8Q9HC52 389 aa7.66□□□□□ -1.18
SMC4-207ENST00000467263 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.66□□□□□ -1.18
SMC4-207ENST00000467263 TMEM265A0A087WTH1 108 aa7.65□□□□□ -1.18
SMC4-207ENST00000467263 PNMA6FA0A0J9YX94 578 aa7.65□□□□□ -1.18
SMC4-207ENST00000467263 DCDC2CA8MYV0 355 aa7.65□□□□□ -1.18
SMC4-207ENST00000467263 FBXO24O75426 580 aa7.65□□□□□ -1.18
SMC4-207ENST00000467263 BMP6P22004 513 aa7.65□□□□□ -1.18
SMC4-207ENST00000467263 ARHGAP27Q6ZUM4 889 aa7.65□□□□□ -1.18
SMC4-207ENST00000467263 C12orf40Q86WS4 652 aa7.65□□□□□ -1.18
SMC4-207ENST00000467263 SPACA3Q8IXA5 215 aa7.65□□□□□ -1.18
SMC4-207ENST00000467263 NECAB3Q96P71 396 aaPredicted RBP7.65□□□□□ -1.18
SMC4-207ENST00000467263 ENC1O14682 589 aa7.64□□□□□ -1.19
SMC4-207ENST00000467263 NKPD1Q17RQ9 610 aa7.64□□□□□ -1.19
SMC4-207ENST00000467263 TPTE2Q6XPS3 522 aa7.64□□□□□ -1.19
SMC4-207ENST00000467263 CNTNAP4Q9C0A0 1308 aa7.63□□□□□ -1.19
SMC4-207ENST00000467263 TREHO43280 583 aa7.63□□□□□ -1.19
SMC4-207ENST00000467263 XRCC5P13010 732 aaKnown RBP7.63□□□□□ -1.19
SMC4-207ENST00000467263 PLCB3Q01970 1234 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms