RNA–Protein interactions for RNA: ENST00000467141.1

MSL3-209, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-209ENST00000467141 EPHA4P54764 986 aa5.44□□□□□ -1.54
MSL3-209ENST00000467141 VPS72Q15906 364 aa5.44□□□□□ -1.54
MSL3-209ENST00000467141 ECM1Q16610 540 aa5.44□□□□□ -1.54
MSL3-209ENST00000467141 LARP1Q6PKG0 1096 aaKnown RBP5.44□□□□□ -1.54
MSL3-209ENST00000467141 DBX2Q6ZNG2 339 aa5.44□□□□□ -1.54
MSL3-209ENST00000467141 LRRC69Q6ZNQ3 347 aa5.44□□□□□ -1.54
MSL3-209ENST00000467141 SSH2Q76I76 1423 aa5.44□□□□□ -1.54
MSL3-209ENST00000467141 AGGF1Q8N302 714 aaeCLIP5.44□□□□□ -1.54
MSL3-209ENST00000467141 NGDNQ8NEJ9 315 aaKnown RBP5.44□□□□□ -1.54
MSL3-209ENST00000467141 ZSCAN18Q8TBC5 510 aaPredicted RBP5.44□□□□□ -1.54
MSL3-209ENST00000467141 SHANK3Q9BYB0 1731 aa5.44□□□□□ -1.54
MSL3-209ENST00000467141 LRP5O75197 1615 aa5.44□□□□□ -1.54
MSL3-209ENST00000467141 ROCK2O75116 1388 aaKnown RBP5.43□□□□□ -1.54
MSL3-209ENST00000467141 KIAA0232Q92628 1395 aa5.43□□□□□ -1.54
MSL3-209ENST00000467141 ANKRD26Q9UPS8 1709 aa5.43□□□□□ -1.54
MSL3-209ENST00000467141 BLMP54132 1417 aaPredicted RBP5.43□□□□□ -1.54
MSL3-209ENST00000467141 SFI1A8K8P3 1242 aa5.43□□□□□ -1.54
MSL3-209ENST00000467141 DLL1O00548 723 aa5.43□□□□□ -1.54
MSL3-209ENST00000467141 DEAF1O75398 565 aaPredicted RBP5.43□□□□□ -1.54
MSL3-209ENST00000467141 PSMA6P60900 246 aaKnown RBP5.43□□□□□ -1.54
MSL3-209ENST00000467141 NBPF8Q3BBV2 869 aa5.43□□□□□ -1.54
MSL3-209ENST00000467141 WFDC8Q8IUA0 241 aa5.43□□□□□ -1.54
MSL3-209ENST00000467141 SIX5Q8N196 739 aa5.43□□□□□ -1.54
MSL3-209ENST00000467141 RHPN1Q8TCX5 695 aa5.43□□□□□ -1.54
MSL3-209ENST00000467141 BHMTQ93088 406 aa5.43□□□□□ -1.54
MSL3-209ENST00000467141 UBL7Q96S82 380 aaPredicted RBP5.43□□□□□ -1.54
MSL3-209ENST00000467141 TSPAN10Q9H1Z9 355 aaPredicted RBP5.43□□□□□ -1.54
MSL3-209ENST00000467141 BTG4Q9NY30 223 aa5.43□□□□□ -1.54
MSL3-209ENST00000467141 MAFBQ9Y5Q3 323 aaPredicted RBP5.43□□□□□ -1.54
MSL3-209ENST00000467141 COL5A2P05997 1499 aaPredicted RBP5.43□□□□□ -1.54
MSL3-209ENST00000467141 CD163L1Q9NR16 1453 aa5.43□□□□□ -1.54
MSL3-209ENST00000467141 USP19O94966 1318 aa5.43□□□□□ -1.54
MSL3-209ENST00000467141 SBNO2Q9Y2G9 1366 aa5.42□□□□□ -1.54
MSL3-209ENST00000467141 M0R2N6 131 aa5.42□□□□□ -1.54
MSL3-209ENST00000467141 EML1O00423 815 aa5.42□□□□□ -1.54
MSL3-209ENST00000467141 GRNP28799 593 aaKnown RBP5.42□□□□□ -1.54
MSL3-209ENST00000467141 SRPK2P78362 688 aaKnown RBP5.42□□□□□ -1.54
MSL3-209ENST00000467141 TSEN2Q8NCE0 465 aaKnown RBP5.42□□□□□ -1.54
MSL3-209ENST00000467141 PPP1R12CQ9BZL4 782 aa5.42□□□□□ -1.54
MSL3-209ENST00000467141 RAPGEFL1Q9UHV5 662 aa5.42□□□□□ -1.54
MSL3-209ENST00000467141 HCN4Q9Y3Q4 1203 aa5.42□□□□□ -1.54
MSL3-209ENST00000467141 KAT6BQ8WYB5 2073 aa5.42□□□□□ -1.54
MSL3-209ENST00000467141 ABCC6O95255 1503 aa5.42□□□□□ -1.54
MSL3-209ENST00000467141 BRD4O60885 1362 aaPredicted RBP5.42□□□□□ -1.54
MSL3-209ENST00000467141 CPDO75976 1380 aa5.42□□□□□ -1.54
MSL3-209ENST00000467141 MAP2P11137 1827 aaKnown RBP5.41□□□□□ -1.54
MSL3-209ENST00000467141 CPSF1Q10570 1443 aaKnown RBP5.41□□□□□ -1.54
MSL3-209ENST00000467141 NHSQ6T4R5 1651 aa5.41□□□□□ -1.54
MSL3-209ENST00000467141 PPP1R12BO60237 982 aaPredicted RBP5.41□□□□□ -1.54
MSL3-209ENST00000467141 LMOD1P29536 600 aaPredicted RBP5.41□□□□□ -1.54
MSL3-209ENST00000467141 SEC13P55735 322 aa5.41□□□□□ -1.54
MSL3-209ENST00000467141 CTSWP56202 376 aa5.41□□□□□ -1.54
MSL3-209ENST00000467141 CHRNA2Q15822 529 aa5.41□□□□□ -1.54
MSL3-209ENST00000467141 SH3PXD2AQ5TCZ1 1133 aa5.41□□□□□ -1.54
MSL3-209ENST00000467141 NUTM2GQ5VZR2 741 aa5.41□□□□□ -1.54
MSL3-209ENST00000467141 ARMC10Q8N2F6 343 aa5.41□□□□□ -1.54
MSL3-209ENST00000467141 HINFPQ9BQA5 517 aa5.41□□□□□ -1.54
MSL3-209ENST00000467141 PRDM11Q9NQV5 511 aa5.41□□□□□ -1.54
MSL3-209ENST00000467141 CCDC9Q9Y3X0 531 aaKnown RBP5.41□□□□□ -1.54
MSL3-209ENST00000467141 SPATA31A5Q5VU36 1347 aa5.41□□□□□ -1.54
MSL3-209ENST00000467141 SPATA31A7Q8IWB4 1347 aa5.41□□□□□ -1.54
MSL3-209ENST00000467141 BTAF1O14981 1849 aa5.41□□□□□ -1.54
MSL3-209ENST00000467141 VIRMAQ69YN4 1812 aaKnown RBP5.41□□□□□ -1.54
MSL3-209ENST00000467141 TUBGCP6Q96RT7 1819 aa5.41□□□□□ -1.54
MSL3-209ENST00000467141 TONSLQ96HA7 1378 aa5.41□□□□□ -1.54
MSL3-209ENST00000467141 DOT1LQ8TEK3 1739 aa5.4□□□□□ -1.54
MSL3-209ENST00000467141 SRCAPQ6ZRS2 3230 aa5.4□□□□□ -1.54
MSL3-209ENST00000467141 WDR64B1ANS9 1081 aa5.4□□□□□ -1.54
MSL3-209ENST00000467141 ZSCAN22P10073 491 aaPredicted RBP5.4□□□□□ -1.54
MSL3-209ENST00000467141 ZC3H6P61129 1189 aaKnown RBP5.4□□□□□ -1.54
MSL3-209ENST00000467141 C1orf53Q5VUE5 145 aa5.4□□□□□ -1.54
MSL3-209ENST00000467141 CILP2Q8IUL8 1156 aa5.4□□□□□ -1.54
MSL3-209ENST00000467141 SIAH1Q8IUQ4 282 aa5.4□□□□□ -1.54
MSL3-209ENST00000467141 ABTB2Q8N961 1025 aa5.4□□□□□ -1.54
MSL3-209ENST00000467141 PHACTR1Q9C0D0 580 aa5.4□□□□□ -1.54
MSL3-209ENST00000467141 VRTNQ9H8Y1 702 aa5.4□□□□□ -1.54
MSL3-209ENST00000467141 ANKIB1Q9P2G1 1089 aa5.4□□□□□ -1.54
MSL3-209ENST00000467141 NAGPAQ9UK23 515 aa5.4□□□□□ -1.54
MSL3-209ENST00000467141 GPC6Q9Y625 555 aaPredicted RBP5.4□□□□□ -1.54
MSL3-209ENST00000467141 SPATA31A1Q5TZJ5 1347 aa5.4□□□□□ -1.55
MSL3-209ENST00000467141 EVC2Q86UK5 1308 aa5.4□□□□□ -1.55
MSL3-209ENST00000467141 CASZ1Q86V15 1759 aa5.39□□□□□ -1.55
MSL3-209ENST00000467141 TRIM26Q12899 539 aaPredicted RBP5.39□□□□□ -1.55
MSL3-209ENST00000467141 NFXL1Q6ZNB6 911 aa5.39□□□□□ -1.55
MSL3-209ENST00000467141 Q6ZS46 218 aa5.39□□□□□ -1.55
MSL3-209ENST00000467141 KRT27Q7Z3Y8 459 aa5.39□□□□□ -1.55
MSL3-209ENST00000467141 SCG3Q8WXD2 468 aaKnown RBP5.39□□□□□ -1.55
MSL3-209ENST00000467141 PIM2Q9P1W9 311 aa5.39□□□□□ -1.55
MSL3-209ENST00000467141 QSER1Q2KHR3 1735 aa5.39□□□□□ -1.55
MSL3-209ENST00000467141 ITGB4P16144 1822 aa5.39□□□□□ -1.55
MSL3-209ENST00000467141 DISP2A7MBM2 1401 aa5.39□□□□□ -1.55
MSL3-209ENST00000467141 CRB1P82279 1406 aa5.39□□□□□ -1.55
MSL3-209ENST00000467141 LY75O60449 1722 aa5.38□□□□□ -1.55
MSL3-209ENST00000467141 BIN1O00499 593 aa5.38□□□□□ -1.55
MSL3-209ENST00000467141 DKK1O94907 266 aa5.38□□□□□ -1.55
MSL3-209ENST00000467141 GCP02774 474 aa5.38□□□□□ -1.55
MSL3-209ENST00000467141 HIRAP54198 1017 aaPredicted RBP5.38□□□□□ -1.55
MSL3-209ENST00000467141 DPYDQ12882 1025 aa5.38□□□□□ -1.55
MSL3-209ENST00000467141 CRTC2Q53ET0 693 aaPredicted RBP5.38□□□□□ -1.55
MSL3-209ENST00000467141 DEFB132Q7Z7B7 95 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms