RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 JUNBP17275 347 aaPredicted RBP8.41□□□□□ -1.06
PRPF40A-205ENST00000467114 NME2P22392 152 aa8.41□□□□□ -1.06
PRPF40A-205ENST00000467114 ZNF252P-AS1Q0IIN9 211 aa8.41□□□□□ -1.06
PRPF40A-205ENST00000467114 ZC3H12AQ5D1E8 599 aaKnown RBP8.41□□□□□ -1.06
PRPF40A-205ENST00000467114 EMILIN2Q9BXX0 1053 aa8.41□□□□□ -1.06
PRPF40A-205ENST00000467114 CACNA2D2Q9NY47 1150 aa8.41□□□□□ -1.06
PRPF40A-205ENST00000467114 AKAP2Q9Y2D5 859 aa8.41□□□□□ -1.06
PRPF40A-205ENST00000467114 NEFMP07197 916 aa8.4□□□□□ -1.06
PRPF40A-205ENST00000467114 HCLS1P14317 486 aaPredicted RBP8.4□□□□□ -1.06
PRPF40A-205ENST00000467114 MAPK1P28482 360 aa8.4□□□□□ -1.06
PRPF40A-205ENST00000467114 ERVK-24P63145 666 aa8.4□□□□□ -1.06
PRPF40A-205ENST00000467114 SPRED2Q7Z698 418 aa8.4□□□□□ -1.06
PRPF40A-205ENST00000467114 HOMEZQ8IX15 550 aa8.4□□□□□ -1.06
PRPF40A-205ENST00000467114 NETO1Q8TDF5 533 aa8.4□□□□□ -1.06
PRPF40A-205ENST00000467114 ASIC4Q96FT7 647 aa8.4□□□□□ -1.06
PRPF40A-205ENST00000467114 MKNK2Q9HBH9 465 aa8.4□□□□□ -1.06
PRPF40A-205ENST00000467114 RNGTTO60942 597 aaKnown RBP8.39□□□□□ -1.07
PRPF40A-205ENST00000467114 ZNF574Q6ZN55 896 aaPredicted RBP8.39□□□□□ -1.07
PRPF40A-205ENST00000467114 PLD6Q8N2A8 252 aaKnown RBP8.39□□□□□ -1.07
PRPF40A-205ENST00000467114 RNF214Q8ND24 703 aa8.39□□□□□ -1.07
PRPF40A-205ENST00000467114 NECAB3Q96P71 396 aaPredicted RBP8.39□□□□□ -1.07
PRPF40A-205ENST00000467114 DUSP23Q9BVJ7 150 aa8.39□□□□□ -1.07
PRPF40A-205ENST00000467114 MAP1SQ66K74 1059 aaPredicted RBP8.38□□□□□ -1.07
PRPF40A-205ENST00000467114 FAM181AQ8N9Y4 354 aa8.38□□□□□ -1.07
PRPF40A-205ENST00000467114 GPBAR1Q8TDU6 330 aa8.38□□□□□ -1.07
PRPF40A-205ENST00000467114 FBF1Q8TES7 1133 aa8.38□□□□□ -1.07
PRPF40A-205ENST00000467114 ISL2Q96A47 359 aa8.38□□□□□ -1.07
PRPF40A-205ENST00000467114 SRCIN1Q9C0H9 1055 aa8.38□□□□□ -1.07
PRPF40A-205ENST00000467114 U3KQE9 123 aa8.38□□□□□ -1.07
PRPF40A-205ENST00000467114 LEFTY1O75610 366 aa8.37□□□□□ -1.07
PRPF40A-205ENST00000467114 GSTT1P30711 240 aa8.37□□□□□ -1.07
PRPF40A-205ENST00000467114 VAV3Q9UKW4 847 aa8.37□□□□□ -1.07
PRPF40A-205ENST00000467114 BMP6P22004 513 aa8.36□□□□□ -1.07
PRPF40A-205ENST00000467114 PRKCQQ04759 706 aa8.36□□□□□ -1.07
PRPF40A-205ENST00000467114 FMR1Q06787 632 aaKnown RBP eCLIP8.36□□□□□ -1.07
PRPF40A-205ENST00000467114 BNIP3Q12983 259 aa8.36□□□□□ -1.07
PRPF40A-205ENST00000467114 PLCL1Q15111 1095 aa8.36□□□□□ -1.07
PRPF40A-205ENST00000467114 OGFOD2Q6N063 350 aa8.36□□□□□ -1.07
PRPF40A-205ENST00000467114 ANKRD24Q8TF21 1146 aa8.36□□□□□ -1.07
PRPF40A-205ENST00000467114 PPM1HQ9ULR3 514 aa8.36□□□□□ -1.07
PRPF40A-205ENST00000467114 ENC1O14682 589 aa8.35□□□□□ -1.07
PRPF40A-205ENST00000467114 PAPLNO95428 1278 aa8.35□□□□□ -1.07
PRPF40A-205ENST00000467114 CD8BP10966 210 aa8.35□□□□□ -1.07
PRPF40A-205ENST00000467114 FUT4P22083 530 aa8.35□□□□□ -1.07
PRPF40A-205ENST00000467114 OXCT1P55809 520 aa8.35□□□□□ -1.07
PRPF40A-205ENST00000467114 IFI16Q16666 785 aaKnown RBP8.35□□□□□ -1.07
PRPF40A-205ENST00000467114 ZNF792Q3KQV3 632 aa8.35□□□□□ -1.07
PRPF40A-205ENST00000467114 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.35□□□□□ -1.07
PRPF40A-205ENST00000467114 CEP44Q9C0F1 390 aa8.35□□□□□ -1.07
PRPF40A-205ENST00000467114 SSU72Q9NP77 194 aaKnown RBP8.35□□□□□ -1.07
PRPF40A-205ENST00000467114 CEACAM5P06731 702 aa8.34□□□□□ -1.07
PRPF40A-205ENST00000467114 NTF4P34130 210 aa8.34□□□□□ -1.07
PRPF40A-205ENST00000467114 RING1Q06587 406 aa8.34□□□□□ -1.07
PRPF40A-205ENST00000467114 MPRIPQ6WCQ1 1025 aa8.34□□□□□ -1.07
PRPF40A-205ENST00000467114 TPTE2Q6XPS3 522 aa8.34□□□□□ -1.07
PRPF40A-205ENST00000467114 POU5F2Q8N7G0 328 aa8.34□□□□□ -1.07
PRPF40A-205ENST00000467114 GRIN3AQ8TCU5 1115 aa8.34□□□□□ -1.07
PRPF40A-205ENST00000467114 OSBPL7Q9BZF2 842 aa8.34□□□□□ -1.07
PRPF40A-205ENST00000467114 CBX8Q9HC52 389 aa8.34□□□□□ -1.07
PRPF40A-205ENST00000467114 SAMM50Q9Y512 469 aa8.34□□□□□ -1.07
PRPF40A-205ENST00000467114 GIPC1O14908 333 aa8.33□□□□□ -1.08
PRPF40A-205ENST00000467114 TRIM37O94972 964 aa8.33□□□□□ -1.08
PRPF40A-205ENST00000467114 PDIA4P13667 645 aaKnown RBP8.33□□□□□ -1.08
PRPF40A-205ENST00000467114 SCARA3Q6AZY7 606 aa8.33□□□□□ -1.08
PRPF40A-205ENST00000467114 FAM214BQ7L5A3 538 aa8.33□□□□□ -1.08
PRPF40A-205ENST00000467114 TOP6BLQ8N6T0 577 aa8.33□□□□□ -1.08
PRPF40A-205ENST00000467114 ACSBG1Q96GR2 724 aa8.33□□□□□ -1.08
PRPF40A-205ENST00000467114 PLAGL2Q9UPG8 496 aa8.33□□□□□ -1.08
PRPF40A-205ENST00000467114 PAGE1O75459 146 aa8.32□□□□□ -1.08
PRPF40A-205ENST00000467114 MAPK8P45983 427 aa8.32□□□□□ -1.08
PRPF40A-205ENST00000467114 ZSCAN29Q8IWY8 852 aaPredicted RBP8.32□□□□□ -1.08
PRPF40A-205ENST00000467114 HEXIM2Q96MH2 286 aaKnown RBP8.32□□□□□ -1.08
PRPF40A-205ENST00000467114 ASB16Q96NS5 453 aa8.32□□□□□ -1.08
PRPF40A-205ENST00000467114 TNKS2Q9H2K2 1166 aa8.32□□□□□ -1.08
PRPF40A-205ENST00000467114 TMEM265A0A087WTH1 108 aa8.31□□□□□ -1.08
PRPF40A-205ENST00000467114 BIN1O00499 593 aa8.31□□□□□ -1.08
PRPF40A-205ENST00000467114 KCNA1Q09470 495 aa8.31□□□□□ -1.08
PRPF40A-205ENST00000467114 PPM1JQ5JR12 505 aa8.31□□□□□ -1.08
PRPF40A-205ENST00000467114 ALG1LQ6GMV1 187 aa8.31□□□□□ -1.08
PRPF40A-205ENST00000467114 ARHGAP27Q6ZUM4 889 aa8.31□□□□□ -1.08
PRPF40A-205ENST00000467114 HRASLS5Q96KN8 279 aa8.31□□□□□ -1.08
PRPF40A-205ENST00000467114 SETDB2Q96T68 719 aa8.31□□□□□ -1.08
PRPF40A-205ENST00000467114 MBNL3Q9NUK0 354 aaKnown RBP8.31□□□□□ -1.08
PRPF40A-205ENST00000467114 LRRC14Q15048 493 aa8.3□□□□□ -1.08
PRPF40A-205ENST00000467114 AOC3Q16853 763 aa8.3□□□□□ -1.08
PRPF40A-205ENST00000467114 LLGL2Q6P1M3 1020 aa8.3□□□□□ -1.08
PRPF40A-205ENST00000467114 ATG4DQ86TL0 474 aaPredicted RBP8.3□□□□□ -1.08
PRPF40A-205ENST00000467114 SNX11Q9Y5W9 270 aa8.3□□□□□ -1.08
PRPF40A-205ENST00000467114 KRTAP4-8A0A0G2JLE6 195 aa8.29□□□□□ -1.08
PRPF40A-205ENST00000467114 IGF2BP3O00425 579 aaKnown RBP eCLIP8.29□□□□□ -1.08
PRPF40A-205ENST00000467114 FANCGO15287 622 aa8.29□□□□□ -1.08
PRPF40A-205ENST00000467114 FBXO24O75426 580 aa8.29□□□□□ -1.08
PRPF40A-205ENST00000467114 RNASE1P07998 156 aaKnown RBP8.29□□□□□ -1.08
PRPF40A-205ENST00000467114 CD96P40200 585 aa8.29□□□□□ -1.08
PRPF40A-205ENST00000467114 ZBTB37Q5TC79 503 aa8.29□□□□□ -1.08
PRPF40A-205ENST00000467114 RASIP1Q5U651 963 aa8.29□□□□□ -1.08
PRPF40A-205ENST00000467114 PRDM10Q9NQV6 1147 aa8.29□□□□□ -1.08
PRPF40A-205ENST00000467114 ADAMTS6Q9UKP5 1117 aa8.29□□□□□ -1.08
PRPF40A-205ENST00000467114 WWC3Q9ULE0 1092 aa8.29□□□□□ -1.08
PRPF40A-205ENST00000467114 CYP8B1Q9UNU6 501 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms