RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 GSCP56915 257 aaPredicted RBP20.72■□□□□ 0.91
SNAPC3-205ENST00000467062 DNAI1Q9UI46 699 aa20.72■□□□□ 0.91
SNAPC3-205ENST00000467062 CTAGE5O15320 804 aa20.71■□□□□ 0.91
SNAPC3-205ENST00000467062 KIF1CO43896 1103 aaKnown RBP20.71■□□□□ 0.91
SNAPC3-205ENST00000467062 PHKA1P46020 1223 aa20.71■□□□□ 0.91
SNAPC3-205ENST00000467062 CTSWP56202 376 aa20.71■□□□□ 0.91
SNAPC3-205ENST00000467062 ANTXR2P58335 489 aa20.71■□□□□ 0.91
SNAPC3-205ENST00000467062 CORO7P57737 925 aa20.71■□□□□ 0.91
SNAPC3-205ENST00000467062 XIRP1Q702N8 1843 aaKnown RBP20.71■□□□□ 0.91
SNAPC3-205ENST00000467062 APPBP2Q92624 585 aa20.71■□□□□ 0.91
SNAPC3-205ENST00000467062 PIH1D3Q9NQM4 214 aaKnown RBP20.71■□□□□ 0.91
SNAPC3-205ENST00000467062 NUP188Q5SRE5 1749 aa20.7■□□□□ 0.9
SNAPC3-205ENST00000467062 ANKRD18BA2A2Z9 1011 aa20.7■□□□□ 0.9
SNAPC3-205ENST00000467062 ZNF213O14771 459 aa20.7■□□□□ 0.9
SNAPC3-205ENST00000467062 SMC2O95347 1197 aa20.7■□□□□ 0.9
SNAPC3-205ENST00000467062 ME1P48163 572 aa20.7■□□□□ 0.9
SNAPC3-205ENST00000467062 C11orf57Q6ZUT1 292 aaPredicted RBP20.7■□□□□ 0.9
SNAPC3-205ENST00000467062 DHX37Q8IY37 1157 aaKnown RBP20.7■□□□□ 0.9
SNAPC3-205ENST00000467062 CEP89Q96ST8 783 aa20.7■□□□□ 0.9
SNAPC3-205ENST00000467062 CARD6Q9BX69 1037 aa20.7■□□□□ 0.9
SNAPC3-205ENST00000467062 TEX13AQ9BXU3 409 aaPredicted RBP20.7■□□□□ 0.9
SNAPC3-205ENST00000467062 FUT8Q9BYC5 575 aa20.7■□□□□ 0.9
SNAPC3-205ENST00000467062 GOLGA8BA8MQT2 603 aa20.7■□□□□ 0.9
SNAPC3-205ENST00000467062 URI1O94763 535 aaPredicted RBP20.7■□□□□ 0.9
SNAPC3-205ENST00000467062 MMS22LQ6ZRQ5 1243 aa20.7■□□□□ 0.9
SNAPC3-205ENST00000467062 STK11IPQ8N1F8 1099 aa20.7■□□□□ 0.9
SNAPC3-205ENST00000467062 ZNF274Q96GC6 653 aaPredicted RBP20.7■□□□□ 0.9
SNAPC3-205ENST00000467062 CARMIL3Q8ND23 1372 aa20.69■□□□□ 0.9
SNAPC3-205ENST00000467062 SALL1Q9NSC2 1324 aa20.69■□□□□ 0.9
SNAPC3-205ENST00000467062 PARP4Q9UKK3 1724 aaKnown RBP20.69■□□□□ 0.9
SNAPC3-205ENST00000467062 JAKMIP3Q5VZ66 844 aa20.69■□□□□ 0.9
SNAPC3-205ENST00000467062 ACSBG1Q96GR2 724 aa20.69■□□□□ 0.9
SNAPC3-205ENST00000467062 UBN2Q6ZU65 1347 aa20.69■□□□□ 0.9
SNAPC3-205ENST00000467062 CPP00450 1065 aa20.69■□□□□ 0.9
SNAPC3-205ENST00000467062 SFPQP23246 707 aaKnown RBP eCLIP20.69■□□□□ 0.9
SNAPC3-205ENST00000467062 NAA16Q6N069 864 aaPredicted RBP20.69■□□□□ 0.9
SNAPC3-205ENST00000467062 DZIP3Q86Y13 1208 aaKnown RBP20.69■□□□□ 0.9
SNAPC3-205ENST00000467062 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.69■□□□□ 0.9
SNAPC3-205ENST00000467062 PLA2G12BQ9BX93 195 aa20.69■□□□□ 0.9
SNAPC3-205ENST00000467062 SENP2Q9HC62 589 aa20.69■□□□□ 0.9
SNAPC3-205ENST00000467062 HPS5Q9UPZ3 1129 aa20.69■□□□□ 0.9
SNAPC3-205ENST00000467062 ZRSR1Q15695 479 aaKnown RBP20.68■□□□□ 0.9
SNAPC3-205ENST00000467062 AIFM3Q96NN9 605 aa20.68■□□□□ 0.9
SNAPC3-205ENST00000467062 NBPF3Q9H094 633 aa20.68■□□□□ 0.9
SNAPC3-205ENST00000467062 RCOR1Q9UKL0 485 aa20.68■□□□□ 0.9
SNAPC3-205ENST00000467062 WWC3Q9ULE0 1092 aa20.68■□□□□ 0.9
SNAPC3-205ENST00000467062 UBR2Q8IWV8 1755 aa20.68■□□□□ 0.9
SNAPC3-205ENST00000467062 CCDC102BQ68D86 513 aa20.68■□□□□ 0.9
SNAPC3-205ENST00000467062 RALYLQ86SE5 291 aaKnown RBP20.68■□□□□ 0.9
SNAPC3-205ENST00000467062 MB21D2Q8IYB1 491 aaPredicted RBP20.68■□□□□ 0.9
SNAPC3-205ENST00000467062 RIC1Q4ADV7 1423 aa20.68■□□□□ 0.9
SNAPC3-205ENST00000467062 ANO10Q9NW15 660 aa20.67■□□□□ 0.9
SNAPC3-205ENST00000467062 EXOC5O00471 708 aa20.67■□□□□ 0.9
SNAPC3-205ENST00000467062 PDE8BO95263 885 aa20.67■□□□□ 0.9
SNAPC3-205ENST00000467062 ZFYP08048 801 aaPredicted RBP20.67■□□□□ 0.9
SNAPC3-205ENST00000467062 EFCAB13Q8IY85 973 aa20.67■□□□□ 0.9
SNAPC3-205ENST00000467062 SEC31BQ9NQW1 1179 aa20.67■□□□□ 0.9
SNAPC3-205ENST00000467062 ZNF532Q9HCE3 1301 aa20.66■□□□□ 0.9
SNAPC3-205ENST00000467062 A0A1B0GVL5 298 aa20.66■□□□□ 0.9
SNAPC3-205ENST00000467062 E2F4Q16254 413 aa20.66■□□□□ 0.9
SNAPC3-205ENST00000467062 TBC1D10CQ8IV04 446 aa20.66■□□□□ 0.9
SNAPC3-205ENST00000467062 DHX40Q8IX18 779 aaKnown RBP20.66■□□□□ 0.9
SNAPC3-205ENST00000467062 VGLL2Q8N8G2 317 aa20.66■□□□□ 0.9
SNAPC3-205ENST00000467062 NCOA7Q8NI08 942 aa20.66■□□□□ 0.9
SNAPC3-205ENST00000467062 CLIC4Q9Y696 253 aa20.66■□□□□ 0.9
SNAPC3-205ENST00000467062 TOGARAM1Q9Y4F4 1720 aa20.66■□□□□ 0.9
SNAPC3-205ENST00000467062 NAT10Q9H0A0 1025 aaKnown RBP20.66■□□□□ 0.9
SNAPC3-205ENST00000467062 H3BQF6 201 aa20.65■□□□□ 0.9
SNAPC3-205ENST00000467062 CPLX1O14810 134 aa20.65■□□□□ 0.9
SNAPC3-205ENST00000467062 ADD2P35612 726 aa20.65■□□□□ 0.9
SNAPC3-205ENST00000467062 CYB5R4Q7L1T6 521 aa20.65■□□□□ 0.9
SNAPC3-205ENST00000467062 FSIP1Q8NA03 581 aa20.65■□□□□ 0.9
SNAPC3-205ENST00000467062 UBE2Q2LH0YL09 131 aa20.65■□□□□ 0.9
SNAPC3-205ENST00000467062 ATP6V1AP38606 617 aa20.65■□□□□ 0.9
SNAPC3-205ENST00000467062 GNL2Q13823 731 aaKnown RBP20.65■□□□□ 0.9
SNAPC3-205ENST00000467062 NBPF11Q86T75 865 aa20.65■□□□□ 0.9
SNAPC3-205ENST00000467062 CEP57L1Q8IYX8 460 aa20.65■□□□□ 0.9
SNAPC3-205ENST00000467062 C8orf76Q96K31 380 aa20.65■□□□□ 0.9
SNAPC3-205ENST00000467062 MYL10Q9BUA6 226 aa20.65■□□□□ 0.9
SNAPC3-205ENST00000467062 MED4Q9NPJ6 270 aa20.65■□□□□ 0.9
SNAPC3-205ENST00000467062 VPS18Q9P253 973 aa20.65■□□□□ 0.9
SNAPC3-205ENST00000467062 KCNG1Q9UIX4 513 aa20.65■□□□□ 0.9
SNAPC3-205ENST00000467062 PCDHA7Q9UN72 937 aa20.65■□□□□ 0.9
SNAPC3-205ENST00000467062 B4E1Z4 1266 aa20.64■□□□□ 0.9
SNAPC3-205ENST00000467062 ADAMTS2O95450 1211 aa20.64■□□□□ 0.9
SNAPC3-205ENST00000467062 ANKRD20A12PQ8NF67 263 aa20.64■□□□□ 0.9
SNAPC3-205ENST00000467062 RABGGTAQ92696 567 aa20.64■□□□□ 0.9
SNAPC3-205ENST00000467062 FBXO3Q9UK99 471 aa20.64■□□□□ 0.9
SNAPC3-205ENST00000467062 LAMA4Q16363 1823 aa20.64■□□□□ 0.89
SNAPC3-205ENST00000467062 KDM4FA0A1W2PPD8 638 aa20.64■□□□□ 0.89
SNAPC3-205ENST00000467062 MAP2K2P36507 400 aa20.64■□□□□ 0.89
SNAPC3-205ENST00000467062 ARMCX5Q6P1M9 558 aa20.64■□□□□ 0.89
SNAPC3-205ENST00000467062 EP400NLQ6ZTU2 488 aa20.64■□□□□ 0.89
SNAPC3-205ENST00000467062 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.64■□□□□ 0.893e-8■■□□□ 12.6
SNAPC3-205ENST00000467062 SHANK3Q9BYB0 1731 aa20.64■□□□□ 0.89
SNAPC3-205ENST00000467062 KIF28PB7ZC32 967 aa20.63■□□□□ 0.89
SNAPC3-205ENST00000467062 MAP2K7O14733 419 aa20.63■□□□□ 0.89
SNAPC3-205ENST00000467062 LONRF2Q1L5Z9 754 aa20.63■□□□□ 0.89
SNAPC3-205ENST00000467062 SUSD4Q5VX71 490 aa20.63■□□□□ 0.89
SNAPC3-205ENST00000467062 PHKBQ93100 1093 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms