RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 ARNTP27540 789 aa5.96□□□□□ -1.46
GTF3C3-209ENST00000466862 SMYD4Q8IYR2 804 aaPredicted RBP5.96□□□□□ -1.46
GTF3C3-209ENST00000466862 GPBAR1Q8TDU6 330 aa5.96□□□□□ -1.46
GTF3C3-209ENST00000466862 LRRC4CQ9HCJ2 640 aa5.96□□□□□ -1.46
GTF3C3-209ENST00000466862 PPM1HQ9ULR3 514 aa5.96□□□□□ -1.46
GTF3C3-209ENST00000466862 FAM87AP0C7U9 286 aa5.95□□□□□ -1.46
GTF3C3-209ENST00000466862 HCLS1P14317 486 aaPredicted RBP5.95□□□□□ -1.46
GTF3C3-209ENST00000466862 GSTT1P30711 240 aa5.95□□□□□ -1.46
GTF3C3-209ENST00000466862 ERVK-24P63145 666 aa5.95□□□□□ -1.46
GTF3C3-209ENST00000466862 RING1Q06587 406 aa5.95□□□□□ -1.46
GTF3C3-209ENST00000466862 KCNA1Q09470 495 aa5.95□□□□□ -1.46
GTF3C3-209ENST00000466862 DUSP27Q5VZP5 1158 aa5.95□□□□□ -1.46
GTF3C3-209ENST00000466862 MPRIPQ6WCQ1 1025 aa5.95□□□□□ -1.46
GTF3C3-209ENST00000466862 FLCNQ8NFG4 579 aa5.95□□□□□ -1.46
GTF3C3-209ENST00000466862 BCL7CQ8WUZ0 217 aaPredicted RBP5.95□□□□□ -1.46
GTF3C3-209ENST00000466862 ISL2Q96A47 359 aa5.95□□□□□ -1.46
GTF3C3-209ENST00000466862 SRCIN1Q9C0H9 1055 aa5.95□□□□□ -1.46
GTF3C3-209ENST00000466862 PIDD1Q9HB75 910 aa5.95□□□□□ -1.46
GTF3C3-209ENST00000466862 LGR6Q9HBX8 967 aa5.95□□□□□ -1.46
GTF3C3-209ENST00000466862 LEFTY1O75610 366 aa5.94□□□□□ -1.46
GTF3C3-209ENST00000466862 SLFN14P0C7P3 912 aa5.94□□□□□ -1.46
GTF3C3-209ENST00000466862 BMP6P22004 513 aa5.94□□□□□ -1.46
GTF3C3-209ENST00000466862 PLCB3Q01970 1234 aa5.94□□□□□ -1.46
GTF3C3-209ENST00000466862 MAP1SQ66K74 1059 aaPredicted RBP5.94□□□□□ -1.46
GTF3C3-209ENST00000466862 ZNF574Q6ZN55 896 aaPredicted RBP5.94□□□□□ -1.46
GTF3C3-209ENST00000466862 UBE3DQ7Z6J8 389 aa5.94□□□□□ -1.46
GTF3C3-209ENST00000466862 KCNB2Q92953 911 aa5.94□□□□□ -1.46
GTF3C3-209ENST00000466862 DUSP23Q9BVJ7 150 aa5.94□□□□□ -1.46
GTF3C3-209ENST00000466862 WWC3Q9ULE0 1092 aa5.94□□□□□ -1.46
GTF3C3-209ENST00000466862 AKAP2Q9Y2D5 859 aa5.94□□□□□ -1.46
GTF3C3-209ENST00000466862 FBXO24O75426 580 aa5.93□□□□□ -1.46
GTF3C3-209ENST00000466862 P4HBP07237 508 aaKnown RBP5.93□□□□□ -1.46
GTF3C3-209ENST00000466862 MAPK8P45983 427 aa5.93□□□□□ -1.46
GTF3C3-209ENST00000466862 HNRNPUQ00839 825 aaKnown RBP eCLIP5.93□□□□□ -1.46
GTF3C3-209ENST00000466862 TPTE2Q6XPS3 522 aa5.93□□□□□ -1.46
GTF3C3-209ENST00000466862 PLD6Q8N2A8 252 aaKnown RBP5.93□□□□□ -1.46
GTF3C3-209ENST00000466862 FAM181AQ8N9Y4 354 aa5.93□□□□□ -1.46
GTF3C3-209ENST00000466862 RNF214Q8ND24 703 aa5.93□□□□□ -1.46
GTF3C3-209ENST00000466862 TRIM37O94972 964 aa5.92□□□□□ -1.46
GTF3C3-209ENST00000466862 CELA3AP09093 270 aa5.92□□□□□ -1.46
GTF3C3-209ENST00000466862 CYP27C1Q4G0S4 372 aa5.92□□□□□ -1.46
GTF3C3-209ENST00000466862 ALG1LQ6GMV1 187 aa5.92□□□□□ -1.46
GTF3C3-209ENST00000466862 SPRED2Q7Z698 418 aa5.92□□□□□ -1.46
GTF3C3-209ENST00000466862 TP53INP2Q8IXH6 220 aa5.92□□□□□ -1.46
GTF3C3-209ENST00000466862 AGBL5Q8NDL9 886 aa5.92□□□□□ -1.46
GTF3C3-209ENST00000466862 GRIN3AQ8TCU5 1115 aa5.92□□□□□ -1.46
GTF3C3-209ENST00000466862 EMILIN2Q9BXX0 1053 aa5.92□□□□□ -1.46
GTF3C3-209ENST00000466862 MKNK2Q9HBH9 465 aa5.92□□□□□ -1.46
GTF3C3-209ENST00000466862 PAPLNO95428 1278 aa5.91□□□□□ -1.46
GTF3C3-209ENST00000466862 OXCT1P55809 520 aa5.91□□□□□ -1.46
GTF3C3-209ENST00000466862 FAM214BQ7L5A3 538 aa5.91□□□□□ -1.46
GTF3C3-209ENST00000466862 ZSCAN29Q8IWY8 852 aaPredicted RBP5.91□□□□□ -1.46
GTF3C3-209ENST00000466862 STK11IPQ8N1F8 1099 aa5.91□□□□□ -1.46
GTF3C3-209ENST00000466862 GAL3ST3Q96A11 431 aa5.91□□□□□ -1.46
GTF3C3-209ENST00000466862 MISP3Q96FF7 219 aa5.91□□□□□ -1.46
GTF3C3-209ENST00000466862 C12orf49Q9H741 205 aa5.91□□□□□ -1.46
GTF3C3-209ENST00000466862 PPP4R2Q9NY27 417 aa5.91□□□□□ -1.46
GTF3C3-209ENST00000466862 PCOLCE2Q9UKZ9 415 aa5.91□□□□□ -1.46
GTF3C3-209ENST00000466862 GIPC1O14908 333 aa5.9□□□□□ -1.46
GTF3C3-209ENST00000466862 CEACAM5P06731 702 aa5.9□□□□□ -1.46
GTF3C3-209ENST00000466862 FZD5Q13467 585 aa5.9□□□□□ -1.46
GTF3C3-209ENST00000466862 PPM1JQ5JR12 505 aa5.9□□□□□ -1.46
GTF3C3-209ENST00000466862 SCARA3Q6AZY7 606 aa5.9□□□□□ -1.46
GTF3C3-209ENST00000466862 TOP6BLQ8N6T0 577 aa5.9□□□□□ -1.46
GTF3C3-209ENST00000466862 NETO1Q8TDF5 533 aa5.9□□□□□ -1.46
GTF3C3-209ENST00000466862 TRAIPQ9BWF2 469 aa5.9□□□□□ -1.46
GTF3C3-209ENST00000466862 CEP44Q9C0F1 390 aa5.9□□□□□ -1.46
GTF3C3-209ENST00000466862 TNKS2Q9H2K2 1166 aa5.9□□□□□ -1.46
GTF3C3-209ENST00000466862 PLAGL2Q9UPG8 496 aa5.9□□□□□ -1.46
GTF3C3-209ENST00000466862 SLC5A6Q9Y289 635 aa5.9□□□□□ -1.46
GTF3C3-209ENST00000466862 RNGTTO60942 597 aaKnown RBP5.89□□□□□ -1.47
GTF3C3-209ENST00000466862 USP17L7P0C7H9 530 aa5.89□□□□□ -1.47
GTF3C3-209ENST00000466862 FUT4P22083 530 aa5.89□□□□□ -1.47
GTF3C3-209ENST00000466862 ZBTB37Q5TC79 503 aa5.89□□□□□ -1.47
GTF3C3-209ENST00000466862 PCNX4Q63HM2 1172 aa5.89□□□□□ -1.47
GTF3C3-209ENST00000466862 LLGL2Q6P1M3 1020 aa5.89□□□□□ -1.47
GTF3C3-209ENST00000466862 HEXIM2Q96MH2 286 aaKnown RBP5.89□□□□□ -1.47
GTF3C3-209ENST00000466862 FAM8A1Q9UBU6 413 aa5.89□□□□□ -1.47
GTF3C3-209ENST00000466862 CD8BP10966 210 aa5.88□□□□□ -1.47
GTF3C3-209ENST00000466862 CD96P40200 585 aa5.88□□□□□ -1.47
GTF3C3-209ENST00000466862 IFI16Q16666 785 aaKnown RBP5.88□□□□□ -1.47
GTF3C3-209ENST00000466862 ZNF792Q3KQV3 632 aa5.88□□□□□ -1.47
GTF3C3-209ENST00000466862 ACSBG1Q96GR2 724 aa5.88□□□□□ -1.47
GTF3C3-209ENST00000466862 CBX8Q9HC52 389 aa5.88□□□□□ -1.47
GTF3C3-209ENST00000466862 ADAMTS6Q9UKP5 1117 aa5.88□□□□□ -1.47
GTF3C3-209ENST00000466862 SPG7Q9UQ90 795 aa5.88□□□□□ -1.47
GTF3C3-209ENST00000466862 DCDC2CA8MYV0 355 aa5.87□□□□□ -1.47
GTF3C3-209ENST00000466862 JUNBP17275 347 aaPredicted RBP5.87□□□□□ -1.47
GTF3C3-209ENST00000466862 ATP2B2Q01814 1243 aa5.87□□□□□ -1.47
GTF3C3-209ENST00000466862 PRKCQQ04759 706 aa5.87□□□□□ -1.47
GTF3C3-209ENST00000466862 PTPN11Q06124 597 aaPredicted RBP5.87□□□□□ -1.47
GTF3C3-209ENST00000466862 BNIP3Q12983 259 aa5.87□□□□□ -1.47
GTF3C3-209ENST00000466862 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.87□□□□□ -1.47
GTF3C3-209ENST00000466862 CSADQ9Y600 493 aa5.87□□□□□ -1.47
GTF3C3-209ENST00000466862 ARID1BQ8NFD5 2236 aaPredicted RBP5.86□□□□□ -1.47
GTF3C3-209ENST00000466862 FANCGO15287 622 aa5.86□□□□□ -1.47
GTF3C3-209ENST00000466862 PLCL1Q15111 1095 aa5.86□□□□□ -1.47
GTF3C3-209ENST00000466862 OGFOD2Q6N063 350 aa5.86□□□□□ -1.47
GTF3C3-209ENST00000466862 LRFN4Q6PJG9 635 aa5.86□□□□□ -1.47
GTF3C3-209ENST00000466862 C12orf40Q86WS4 652 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms