RNA–Protein interactions for RNA: ENST00000466185.1

PRPF4B-204, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,297 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-204ENST00000466185 TSPOAP1O95153 1857 aa8.53□□□□□ -1.04
PRPF4B-204ENST00000466185 AKNAQ7Z591 1439 aa8.53□□□□□ -1.04
PRPF4B-204ENST00000466185 PPM1GO15355 546 aaPredicted RBP8.52□□□□□ -1.05
PRPF4B-204ENST00000466185 PPFIA3O75145 1194 aa8.52□□□□□ -1.05
PRPF4B-204ENST00000466185 MPP2Q14168 576 aa8.52□□□□□ -1.05
PRPF4B-204ENST00000466185 EGFLAMQ63HQ2 1017 aa8.52□□□□□ -1.05
PRPF4B-204ENST00000466185 GRIN3AQ8TCU5 1115 aa8.52□□□□□ -1.05
PRPF4B-204ENST00000466185 SMG9Q9H0W8 520 aaKnown RBP8.52□□□□□ -1.05
PRPF4B-204ENST00000466185 KLF15Q9UIH9 416 aa8.52□□□□□ -1.05
PRPF4B-204ENST00000466185 TRIM33Q9UPN9 1127 aa8.52□□□□□ -1.05
PRPF4B-204ENST00000466185 ABCC1P33527 1531 aa8.52□□□□□ -1.05
PRPF4B-204ENST00000466185 FGD6Q6ZV73 1430 aa8.52□□□□□ -1.05
PRPF4B-204ENST00000466185 SAMD9LQ8IVG5 1584 aa8.52□□□□□ -1.05
PRPF4B-204ENST00000466185 ADGRL1O94910 1474 aa8.51□□□□□ -1.05
PRPF4B-204ENST00000466185 SMAD7O15105 426 aaKnown RBP8.51□□□□□ -1.05
PRPF4B-204ENST00000466185 CILPO75339 1184 aa8.51□□□□□ -1.05
PRPF4B-204ENST00000466185 SNRPBP14678 240 aaKnown RBP8.51□□□□□ -1.05
PRPF4B-204ENST00000466185 LRRC14Q15048 493 aa8.51□□□□□ -1.05
PRPF4B-204ENST00000466185 CWF19L2Q2TBE0 894 aaKnown RBP8.51□□□□□ -1.05
PRPF4B-204ENST00000466185 LLGL2Q6P1M3 1020 aa8.51□□□□□ -1.05
PRPF4B-204ENST00000466185 ELMSAN1Q6PJG2 1045 aa8.51□□□□□ -1.05
PRPF4B-204ENST00000466185 SV2AQ7L0J3 742 aa8.51□□□□□ -1.05
PRPF4B-204ENST00000466185 SRPK1Q96SB4 655 aaKnown RBP8.51□□□□□ -1.05
PRPF4B-204ENST00000466185 LACRTQ9GZZ8 138 aa8.51□□□□□ -1.05
PRPF4B-204ENST00000466185 AVENQ9NQS1 362 aaPredicted RBP8.51□□□□□ -1.05
PRPF4B-204ENST00000466185 MRPL42Q9Y6G3 142 aaKnown RBP8.51□□□□□ -1.05
PRPF4B-204ENST00000466185 KIAA1107Q9UPP5 1409 aa8.51□□□□□ -1.05
PRPF4B-204ENST00000466185 CAMSAP2Q08AD1 1489 aa8.51□□□□□ -1.05
PRPF4B-204ENST00000466185 TCOF1Q13428 1488 aaKnown RBP8.51□□□□□ -1.05
PRPF4B-204ENST00000466185 PLEKHH2Q8IVE3 1493 aa8.51□□□□□ -1.05
PRPF4B-204ENST00000466185 U2SURPO15042 1029 aaKnown RBP8.5□□□□□ -1.05
PRPF4B-204ENST00000466185 ESRRAP11474 423 aaPredicted RBP8.5□□□□□ -1.05
PRPF4B-204ENST00000466185 ARNTP27540 789 aa8.5□□□□□ -1.05
PRPF4B-204ENST00000466185 MCM4P33991 863 aa8.5□□□□□ -1.05
PRPF4B-204ENST00000466185 ADH7P40394 386 aa8.5□□□□□ -1.05
PRPF4B-204ENST00000466185 EIF6P56537 245 aaKnown RBP8.5□□□□□ -1.05
PRPF4B-204ENST00000466185 KANK3Q6NY19 840 aa8.5□□□□□ -1.05
PRPF4B-204ENST00000466185 FAM169BQ8N8A8 192 aa8.5□□□□□ -1.05
PRPF4B-204ENST00000466185 GAL3ST3Q96A11 431 aa8.5□□□□□ -1.05
PRPF4B-204ENST00000466185 LPIN3Q9BQK8 851 aa8.5□□□□□ -1.05
PRPF4B-204ENST00000466185 SCAPERQ9BY12 1400 aa8.5□□□□□ -1.05
PRPF4B-204ENST00000466185 CBX8Q9HC52 389 aa8.5□□□□□ -1.05
PRPF4B-204ENST00000466185 SH2B1Q9NRF2 756 aaPredicted RBP8.5□□□□□ -1.05
PRPF4B-204ENST00000466185 COL17A1Q9UMD9 1497 aaPredicted RBP8.5□□□□□ -1.05
PRPF4B-204ENST00000466185 SYCP2Q9BX26 1530 aa8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 ARHGEF12Q9NZN5 1544 aa8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 SBNO2Q9Y2G9 1366 aa8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 POGZQ7Z3K3 1410 aa8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 ADARB2-AS1A8MUL3 147 aa8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 CDK11BP21127 795 aaKnown RBP8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 GIPRP48546 466 aa8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 ZNF165P49910 485 aa8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 TCEAL1Q15170 157 aa8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 TNNI3KQ59H18 835 aa8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 REC114Q7Z4M0 266 aa8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 NANOS1Q8WY41 292 aaKnown RBP8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 FERD3LQ96RJ6 166 aa8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 BRMS1Q9HCU9 246 aa8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 SNTG2Q9NY99 539 aa8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 R3HCC1Q9Y3T6 440 aaKnown RBP8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 KDM6BO15054 1643 aa8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 PTPN23Q9H3S7 1636 aa8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 DENND4BO75064 1496 aaPredicted RBP8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 ZNF644Q9H582 1327 aaPredicted RBP8.49□□□□□ -1.05
PRPF4B-204ENST00000466185 RRBP1Q9P2E9 1410 aaKnown RBP8.48□□□□□ -1.05
PRPF4B-204ENST00000466185 PTPN11Q06124 597 aaPredicted RBP8.48□□□□□ -1.05
PRPF4B-204ENST00000466185 ZNF252P-AS1Q0IIN9 211 aa8.48□□□□□ -1.05
PRPF4B-204ENST00000466185 FBXW10Q5XX13 1052 aa8.48□□□□□ -1.05
PRPF4B-204ENST00000466185 REXO1Q8N1G1 1221 aaKnown RBP8.48□□□□□ -1.05
PRPF4B-204ENST00000466185 DEPDC7Q96QD5 511 aa8.48□□□□□ -1.05
PRPF4B-204ENST00000466185 MDFIQ99750 246 aa8.48□□□□□ -1.05
PRPF4B-204ENST00000466185 EMILIN2Q9BXX0 1053 aa8.48□□□□□ -1.05
PRPF4B-204ENST00000466185 FRRS1LQ9P0K9 344 aa8.48□□□□□ -1.05
PRPF4B-204ENST00000466185 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.48□□□□□ -1.05
PRPF4B-204ENST00000466185 ZNF518AQ6AHZ1 1483 aa8.48□□□□□ -1.05
PRPF4B-204ENST00000466185 MBD5Q9P267 1494 aa8.48□□□□□ -1.05
PRPF4B-204ENST00000466185 FRMPD1Q5SYB0 1578 aa8.48□□□□□ -1.05
PRPF4B-204ENST00000466185 FAM221BA6H8Z2 402 aa8.47□□□□□ -1.05
PRPF4B-204ENST00000466185 ARAFP10398 606 aa8.47□□□□□ -1.05
PRPF4B-204ENST00000466185 MX2P20592 715 aa8.47□□□□□ -1.05
PRPF4B-204ENST00000466185 ADH6P28332 368 aa8.47□□□□□ -1.05
PRPF4B-204ENST00000466185 CLCQ05315 142 aa8.47□□□□□ -1.05
PRPF4B-204ENST00000466185 IKBKEQ14164 716 aa8.47□□□□□ -1.05
PRPF4B-204ENST00000466185 RASA3Q14644 834 aa8.47□□□□□ -1.05
PRPF4B-204ENST00000466185 GK5Q6ZS86 529 aa8.47□□□□□ -1.05
PRPF4B-204ENST00000466185 LRP10Q7Z4F1 713 aa8.47□□□□□ -1.05
PRPF4B-204ENST00000466185 PDZD3Q86UT5 571 aa8.47□□□□□ -1.05
PRPF4B-204ENST00000466185 CRBNQ96SW2 442 aa8.47□□□□□ -1.05
PRPF4B-204ENST00000466185 ZNRF3Q9ULT6 936 aa8.47□□□□□ -1.05
PRPF4B-204ENST00000466185 KDM5CP41229 1560 aa8.47□□□□□ -1.05
PRPF4B-204ENST00000466185 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.47□□□□□ -1.05
PRPF4B-204ENST00000466185 TRAPPC8Q9Y2L5 1435 aa8.46□□□□□ -1.05
PRPF4B-204ENST00000466185 CCDC141Q6ZP82 1450 aa8.46□□□□□ -1.05
PRPF4B-204ENST00000466185 ZMYM4Q5VZL5 1548 aa8.46□□□□□ -1.05
PRPF4B-204ENST00000466185 FAM177BA6PVY3 158 aa8.46□□□□□ -1.06
PRPF4B-204ENST00000466185 RAPGEF3O95398 923 aa8.46□□□□□ -1.06
PRPF4B-204ENST00000466185 BPNT1O95861 308 aa8.46□□□□□ -1.06
PRPF4B-204ENST00000466185 EPHA1P21709 976 aa8.46□□□□□ -1.06
PRPF4B-204ENST00000466185 CDC27P30260 824 aa8.46□□□□□ -1.06
PRPF4B-204ENST00000466185 HNRNPMP52272 730 aaKnown RBP eCLIP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms