RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 SERPINB4P48594 390 aa4.62□□□□□ -1.67
CCDC93-205ENST00000466171 TTLL4Q14679 1199 aa4.62□□□□□ -1.67
CCDC93-205ENST00000466171 AOC3Q16853 763 aa4.62□□□□□ -1.67
CCDC93-205ENST00000466171 ANGEL2Q5VTE6 544 aaKnown RBP4.62□□□□□ -1.67
CCDC93-205ENST00000466171 KSR1Q8IVT5 923 aa4.62□□□□□ -1.67
CCDC93-205ENST00000466171 FAM181AQ8N9Y4 354 aa4.62□□□□□ -1.67
CCDC93-205ENST00000466171 TMEM40Q8WWA1 233 aa4.62□□□□□ -1.67
CCDC93-205ENST00000466171 DMRTB1Q96MA1 342 aa4.62□□□□□ -1.67
CCDC93-205ENST00000466171 TMEM39AQ9NV64 488 aa4.62□□□□□ -1.67
CCDC93-205ENST00000466171 ZNF862O60290 1169 aa4.61□□□□□ -1.67
CCDC93-205ENST00000466171 HCLS1P14317 486 aaPredicted RBP4.61□□□□□ -1.67
CCDC93-205ENST00000466171 ARHGAP4P98171 946 aa4.61□□□□□ -1.67
CCDC93-205ENST00000466171 ZNF124Q15973 351 aa4.61□□□□□ -1.67
CCDC93-205ENST00000466171 ZNF648Q5T619 568 aaPredicted RBP4.61□□□□□ -1.67
CCDC93-205ENST00000466171 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.61□□□□□ -1.67
CCDC93-205ENST00000466171 WDR89Q96FK6 387 aaPredicted RBP4.61□□□□□ -1.67
CCDC93-205ENST00000466171 CSRNP1Q96S65 589 aa4.61□□□□□ -1.67
CCDC93-205ENST00000466171 EMILIN2Q9BXX0 1053 aa4.61□□□□□ -1.67
CCDC93-205ENST00000466171 DISC1Q9NRI5 854 aa4.61□□□□□ -1.67
CCDC93-205ENST00000466171 DBX1A6NMT0 343 aa4.6□□□□□ -1.67
CCDC93-205ENST00000466171 RNASE1P07998 156 aaKnown RBP4.6□□□□□ -1.67
CCDC93-205ENST00000466171 FCGRTP55899 365 aa4.6□□□□□ -1.67
CCDC93-205ENST00000466171 PDE4CQ08493 712 aa4.6□□□□□ -1.67
CCDC93-205ENST00000466171 FAAP100Q0VG06 881 aa4.6□□□□□ -1.67
CCDC93-205ENST00000466171 GRM2Q14416 872 aa4.6□□□□□ -1.67
CCDC93-205ENST00000466171 GLIS3Q8NEA6 775 aa4.6□□□□□ -1.67
CCDC93-205ENST00000466171 DUSP23Q9BVJ7 150 aa4.6□□□□□ -1.67
CCDC93-205ENST00000466171 GTF2IRD1Q9UHL9 959 aa4.6□□□□□ -1.67
CCDC93-205ENST00000466171 GTF3C3Q9Y5Q9 886 aa4.6□□□□□ -1.67
CCDC93-205ENST00000466171 SNX11Q9Y5W9 270 aa4.6□□□□□ -1.67
CCDC93-205ENST00000466171 NCANO14594 1321 aa4.59□□□□□ -1.67
CCDC93-205ENST00000466171 GPR182O15218 404 aa4.59□□□□□ -1.67
CCDC93-205ENST00000466171 OXCT1P55809 520 aa4.59□□□□□ -1.67
CCDC93-205ENST00000466171 ECM1Q16610 540 aa4.59□□□□□ -1.67
CCDC93-205ENST00000466171 CARMIL2Q6F5E8 1435 aa4.59□□□□□ -1.67
CCDC93-205ENST00000466171 SLC23A3Q6PIS1 610 aa4.59□□□□□ -1.67
CCDC93-205ENST00000466171 WFDC3Q8IUB2 231 aa4.59□□□□□ -1.67
CCDC93-205ENST00000466171 SULF2Q8IWU5 870 aa4.59□□□□□ -1.67
CCDC93-205ENST00000466171 TOP6BLQ8N6T0 577 aa4.59□□□□□ -1.67
CCDC93-205ENST00000466171 RNF214Q8ND24 703 aa4.59□□□□□ -1.67
CCDC93-205ENST00000466171 ASB11Q8WXH4 323 aa4.59□□□□□ -1.67
CCDC93-205ENST00000466171 ACSBG1Q96GR2 724 aa4.59□□□□□ -1.67
CCDC93-205ENST00000466171 PICK1Q9NRD5 415 aa4.59□□□□□ -1.67
CCDC93-205ENST00000466171 MBNL3Q9NUK0 354 aaKnown RBP4.59□□□□□ -1.67
CCDC93-205ENST00000466171 FAM53CQ9NYF3 392 aa4.59□□□□□ -1.67
CCDC93-205ENST00000466171 AKAP2Q9Y2D5 859 aa4.59□□□□□ -1.67
CCDC93-205ENST00000466171 SAMM50Q9Y512 469 aa4.59□□□□□ -1.67
CCDC93-205ENST00000466171 PCDHGC5Q9Y5F6 944 aa4.59□□□□□ -1.67
CCDC93-205ENST00000466171 LEFTY1O75610 366 aa4.58□□□□□ -1.68
CCDC93-205ENST00000466171 ZNF865P0CJ78 1059 aaPredicted RBP4.58□□□□□ -1.68
CCDC93-205ENST00000466171 ITIH2P19823 946 aa4.58□□□□□ -1.68
CCDC93-205ENST00000466171 NME2P22392 152 aa4.58□□□□□ -1.68
CCDC93-205ENST00000466171 ARNTP27540 789 aa4.58□□□□□ -1.68
CCDC93-205ENST00000466171 ERVK-24P63145 666 aa4.58□□□□□ -1.68
CCDC93-205ENST00000466171 MAP1SQ66K74 1059 aaPredicted RBP4.58□□□□□ -1.68
CCDC93-205ENST00000466171 LRRN4CLQ8ND94 238 aa4.58□□□□□ -1.68
CCDC93-205ENST00000466171 EPS8L3Q8TE67 593 aaKnown RBP4.58□□□□□ -1.68
CCDC93-205ENST00000466171 ISL2Q96A47 359 aa4.58□□□□□ -1.68
CCDC93-205ENST00000466171 ALKBH8Q96BT7 664 aaKnown RBP4.58□□□□□ -1.68
CCDC93-205ENST00000466171 FAM84AQ96KN4 292 aa4.58□□□□□ -1.68
CCDC93-205ENST00000466171 RBCK1Q9BYM8 510 aa4.58□□□□□ -1.68
CCDC93-205ENST00000466171 CBX8Q9HC52 389 aa4.58□□□□□ -1.68
CCDC93-205ENST00000466171 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.58□□□□□ -1.68
CCDC93-205ENST00000466171 GNAT3A8MTJ3 354 aa4.57□□□□□ -1.68
CCDC93-205ENST00000466171 CD96P40200 585 aa4.57□□□□□ -1.68
CCDC93-205ENST00000466171 ZC3H12AQ5D1E8 599 aaKnown RBP4.57□□□□□ -1.68
CCDC93-205ENST00000466171 CDC37L1Q7L3B6 337 aa4.57□□□□□ -1.68
CCDC93-205ENST00000466171 PDZD3Q86UT5 571 aa4.57□□□□□ -1.68
CCDC93-205ENST00000466171 BCO2Q9BYV7 579 aa4.57□□□□□ -1.68
CCDC93-205ENST00000466171 ADAMTS6Q9UKP5 1117 aa4.57□□□□□ -1.68
CCDC93-205ENST00000466171 LRRC10BA6NIK2 292 aa4.56□□□□□ -1.68
CCDC93-205ENST00000466171 IGF2BP3O00425 579 aaKnown RBP eCLIP4.56□□□□□ -1.68
CCDC93-205ENST00000466171 NEFMP07197 916 aa4.56□□□□□ -1.68
CCDC93-205ENST00000466171 IKZF1Q13422 519 aa4.56□□□□□ -1.68
CCDC93-205ENST00000466171 KCNMB1Q16558 191 aa4.56□□□□□ -1.68
CCDC93-205ENST00000466171 TXNDC2Q86VQ3 553 aa4.56□□□□□ -1.68
CCDC93-205ENST00000466171 ZSWIM9Q86XI8 627 aa4.56□□□□□ -1.68
CCDC93-205ENST00000466171 KCT2Q8NC54 265 aa4.56□□□□□ -1.68
CCDC93-205ENST00000466171 FLAD1Q8NFF5 587 aa4.56□□□□□ -1.68
CCDC93-205ENST00000466171 BHLHE22Q8NFJ8 381 aaPredicted RBP4.56□□□□□ -1.68
CCDC93-205ENST00000466171 TNKS2Q9H2K2 1166 aa4.56□□□□□ -1.68
CCDC93-205ENST00000466171 PRDM10Q9NQV6 1147 aa4.56□□□□□ -1.68
CCDC93-205ENST00000466171 PLAGL2Q9UPG8 496 aa4.56□□□□□ -1.68
CCDC93-205ENST00000466171 AFMP43652 599 aa4.55□□□□□ -1.68
CCDC93-205ENST00000466171 ZP2Q05996 745 aa4.55□□□□□ -1.68
CCDC93-205ENST00000466171 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
CCDC93-205ENST00000466171 GPBAR1Q8TDU6 330 aa4.55□□□□□ -1.68
CCDC93-205ENST00000466171 CEP44Q9C0F1 390 aa4.55□□□□□ -1.68
CCDC93-205ENST00000466171 C1orf115Q9H7X2 142 aa4.55□□□□□ -1.68
CCDC93-205ENST00000466171 PRRG2O14669 202 aa4.54□□□□□ -1.68
CCDC93-205ENST00000466171 FANCGO15287 622 aa4.54□□□□□ -1.68
CCDC93-205ENST00000466171 TRIM37O94972 964 aa4.54□□□□□ -1.68
CCDC93-205ENST00000466171 IGHA2P01877 340 aa4.54□□□□□ -1.68
CCDC93-205ENST00000466171 GSTT1P30711 240 aa4.54□□□□□ -1.68
CCDC93-205ENST00000466171 CLCN7P51798 805 aa4.54□□□□□ -1.68
CCDC93-205ENST00000466171 LRRC14Q15048 493 aa4.54□□□□□ -1.68
CCDC93-205ENST00000466171 MLANAQ16655 118 aa4.54□□□□□ -1.68
CCDC93-205ENST00000466171 NXPE4Q6UWF7 544 aa4.54□□□□□ -1.68
CCDC93-205ENST00000466171 PPP1R16BQ96T49 567 aa4.54□□□□□ -1.68
CCDC93-205ENST00000466171 FOXQ1Q9C009 403 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms