RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 EPB41L2O43491 1005 aaKnown RBP13.33□□□□□ -0.28
VCP-204ENST00000466100 MYO1BO43795 1136 aa13.33□□□□□ -0.28
VCP-204ENST00000466100 ENTPD3O75355 529 aa13.33□□□□□ -0.28
VCP-204ENST00000466100 VEGFAP15692 232 aaPredicted RBP13.33□□□□□ -0.28
VCP-204ENST00000466100 FAM83AQ86UY5 434 aa13.33□□□□□ -0.28
VCP-204ENST00000466100 MAPKAPK5Q8IW41 473 aa13.33□□□□□ -0.28
VCP-204ENST00000466100 IFNL3Q8IZI9 196 aa13.33□□□□□ -0.28
VCP-204ENST00000466100 USP26Q9BXU7 913 aa13.33□□□□□ -0.28
VCP-204ENST00000466100 OSBPL5Q9H0X9 879 aaPredicted RBP13.33□□□□□ -0.28
VCP-204ENST00000466100 GGA3Q9NZ52 723 aa13.33□□□□□ -0.28
VCP-204ENST00000466100 ROBO3Q96MS0 1386 aa13.32□□□□□ -0.28
VCP-204ENST00000466100 FGAP02671 866 aa13.32□□□□□ -0.28
VCP-204ENST00000466100 USP5P45974 858 aa13.32□□□□□ -0.28
VCP-204ENST00000466100 EVX2Q03828 476 aa13.32□□□□□ -0.28
VCP-204ENST00000466100 ANGEL2Q5VTE6 544 aaKnown RBP13.32□□□□□ -0.28
VCP-204ENST00000466100 SH3BP5LQ7L8J4 393 aa13.32□□□□□ -0.28
VCP-204ENST00000466100 ZFPM1Q8IX07 1006 aa13.32□□□□□ -0.28
VCP-204ENST00000466100 ZC3H15Q8WU90 426 aaKnown RBP13.32□□□□□ -0.28
VCP-204ENST00000466100 RRAGCQ9HB90 399 aa13.32□□□□□ -0.28
VCP-204ENST00000466100 TMOD2Q9NZR1 351 aa13.32□□□□□ -0.28
VCP-204ENST00000466100 RBM8AQ9Y5S9 174 aaKnown RBP13.32□□□□□ -0.28
VCP-204ENST00000466100 TCP10L2B9ZVM9 353 aa13.31□□□□□ -0.28
VCP-204ENST00000466100 EIF5BO60841 1220 aaKnown RBP13.31□□□□□ -0.28
VCP-204ENST00000466100 POTEIP0CG38 1075 aa13.31□□□□□ -0.28
VCP-204ENST00000466100 POTEJP0CG39 1038 aa13.31□□□□□ -0.28
VCP-204ENST00000466100 PICALMQ13492 652 aa13.31□□□□□ -0.28
VCP-204ENST00000466100 NECTIN1Q15223 517 aa13.31□□□□□ -0.28
VCP-204ENST00000466100 SBK1Q52WX2 424 aa13.31□□□□□ -0.28
VCP-204ENST00000466100 CTR9Q6PD62 1173 aa13.31□□□□□ -0.28
VCP-204ENST00000466100 KIAA1211Q6ZU35 1233 aa13.31□□□□□ -0.28
VCP-204ENST00000466100 PNMA8AQ86V59 439 aaPredicted RBP13.31□□□□□ -0.28
VCP-204ENST00000466100 APOBEC3FQ8IUX4 373 aaKnown RBP13.31□□□□□ -0.28
VCP-204ENST00000466100 ZNF526Q8TF50 670 aaPredicted RBP13.31□□□□□ -0.28
VCP-204ENST00000466100 FAM151AQ8WW52 585 aa13.31□□□□□ -0.28
VCP-204ENST00000466100 NBPF3Q9H094 633 aa13.31□□□□□ -0.28
VCP-204ENST00000466100 VEZTQ9HBM0 779 aa13.31□□□□□ -0.28
VCP-204ENST00000466100 U3KPZ7 1027 aaPredicted RBP13.31□□□□□ -0.28
VCP-204ENST00000466100 GREB1LQ9C091 1923 aaPredicted RBP13.31□□□□□ -0.28
VCP-204ENST00000466100 ATAD5Q96QE3 1844 aa13.3□□□□□ -0.28
VCP-204ENST00000466100 SSC5DA1L4H1 1573 aa13.3□□□□□ -0.28
VCP-204ENST00000466100 CYP2D7A0A087X1C5 515 aa13.3□□□□□ -0.28
VCP-204ENST00000466100 SMIM22K7EJ46 135 aa13.3□□□□□ -0.28
VCP-204ENST00000466100 APPP05067 770 aa13.3□□□□□ -0.28
VCP-204ENST00000466100 CYP2D6P10635 497 aa13.3□□□□□ -0.28
VCP-204ENST00000466100 TDO2P48775 406 aa13.3□□□□□ -0.28
VCP-204ENST00000466100 CDAN1Q8IWY9 1227 aa13.3□□□□□ -0.28
VCP-204ENST00000466100 KCNB2Q92953 911 aa13.3□□□□□ -0.28
VCP-204ENST00000466100 TEPSINQ96N21 525 aa13.3□□□□□ -0.28
VCP-204ENST00000466100 NACAP1Q9BZK3 213 aa13.3□□□□□ -0.28
VCP-204ENST00000466100 NAPBQ9H115 298 aa13.3□□□□□ -0.28
VCP-204ENST00000466100 ARPP21Q9UBL0 812 aaPredicted RBP13.3□□□□□ -0.28
VCP-204ENST00000466100 SAP30BPQ9UHR5 308 aaKnown RBP13.3□□□□□ -0.28
VCP-204ENST00000466100 SCAF8Q9UPN6 1271 aaKnown RBP13.3□□□□□ -0.28
VCP-204ENST00000466100 OTOFQ9HC10 1997 aa13.3□□□□□ -0.28
VCP-204ENST00000466100 TRPM7Q96QT4 1865 aa13.29□□□□□ -0.28
VCP-204ENST00000466100 DDTLA6NHG4 134 aaPredicted RBP13.29□□□□□ -0.28
VCP-204ENST00000466100 USP17L12C9JPN9 530 aa13.29□□□□□ -0.28
VCP-204ENST00000466100 USP17L21D6R901 530 aa13.29□□□□□ -0.28
VCP-204ENST00000466100 HSPA4P34932 840 aa13.29□□□□□ -0.28
VCP-204ENST00000466100 TCP10Q12799 353 aa13.29□□□□□ -0.28
VCP-204ENST00000466100 TNFAIP1Q13829 316 aa13.29□□□□□ -0.28
VCP-204ENST00000466100 RASA3Q14644 834 aa13.29□□□□□ -0.28
VCP-204ENST00000466100 C12orf60Q5U649 245 aa13.29□□□□□ -0.28
VCP-204ENST00000466100 TMEM39BQ9GZU3 492 aa13.29□□□□□ -0.28
VCP-204ENST00000466100 MCM9Q9NXL9 1143 aa13.29□□□□□ -0.28
VCP-204ENST00000466100 ANAPC4Q9UJX5 808 aa13.29□□□□□ -0.28
VCP-204ENST00000466100 PALD1Q9ULE6 856 aa13.29□□□□□ -0.28
VCP-204ENST00000466100 TACC3Q9Y6A5 838 aa13.29□□□□□ -0.28
VCP-204ENST00000466100 TAF6LQ9Y6J9 622 aa13.29□□□□□ -0.28
VCP-204ENST00000466100 SLC27A2O14975 620 aa13.28□□□□□ -0.28
VCP-204ENST00000466100 CYP21A2P08686 494 aa13.28□□□□□ -0.28
VCP-204ENST00000466100 TNNI2P48788 182 aa13.28□□□□□ -0.28
VCP-204ENST00000466100 PLCD1P51178 756 aa13.28□□□□□ -0.28
VCP-204ENST00000466100 EAPPQ56P03 285 aaPredicted RBP13.28□□□□□ -0.28
VCP-204ENST00000466100 CREB3L3Q68CJ9 461 aa13.28□□□□□ -0.28
VCP-204ENST00000466100 METTL16Q86W50 562 aaKnown RBP13.28□□□□□ -0.28
VCP-204ENST00000466100 LDHDQ86WU2 507 aa13.28□□□□□ -0.28
VCP-204ENST00000466100 TBC1D10CQ8IV04 446 aa13.28□□□□□ -0.28
VCP-204ENST00000466100 IL17RAQ96F46 866 aa13.28□□□□□ -0.28
VCP-204ENST00000466100 DDRGK1Q96HY6 314 aa13.28□□□□□ -0.28
VCP-204ENST00000466100 DEFB129Q9H1M3 183 aa13.28□□□□□ -0.28
VCP-204ENST00000466100 DHX36Q9H2U1 1008 aaKnown RBP13.28□□□□□ -0.28
VCP-204ENST00000466100 CTNNA3Q9UI47 895 aa13.28□□□□□ -0.28
VCP-204ENST00000466100 PPP2R3BQ9Y5P8 575 aa13.28□□□□□ -0.28
VCP-204ENST00000466100 GABPAQ06546 454 aa13.27□□□□□ -0.29
VCP-204ENST00000466100 PPARAQ07869 468 aa13.27□□□□□ -0.29
VCP-204ENST00000466100 RASEFQ8IZ41 740 aa13.27□□□□□ -0.29
VCP-204ENST00000466100 EHD4Q9H223 541 aa13.27□□□□□ -0.29
VCP-204ENST00000466100 DNAJC18Q9H819 358 aa13.27□□□□□ -0.29
VCP-204ENST00000466100 DOCK1Q14185 1865 aa13.27□□□□□ -0.29
VCP-204ENST00000466100 ADM5C9JUS6 153 aa13.26□□□□□ -0.29
VCP-204ENST00000466100 KIF3CO14782 793 aa13.26□□□□□ -0.29
VCP-204ENST00000466100 POLR3DP05423 398 aaPredicted RBP13.26□□□□□ -0.29
VCP-204ENST00000466100 FGRP09769 529 aa13.26□□□□□ -0.29
VCP-204ENST00000466100 SLURP2P0DP57 97 aa13.26□□□□□ -0.29
VCP-204ENST00000466100 RBM25P49756 843 aaKnown RBP13.26□□□□□ -0.29
VCP-204ENST00000466100 HAND2P61296 217 aa13.26□□□□□ -0.29
VCP-204ENST00000466100 IMMTQ16891 758 aaKnown RBP13.26□□□□□ -0.29
VCP-204ENST00000466100 SLC4A8Q2Y0W8 1093 aa13.26□□□□□ -0.29
VCP-204ENST00000466100 TSGA10IPQ3SY00 556 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms