RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 MIGA2Q7L4E1 593 aa31.48■■■□□ 2.63
SMC4-206ENST00000465903 SMC5Q8IY18 1101 aa31.48■■■□□ 2.63
SMC4-206ENST00000465903 TEX11Q8IYF3 940 aa31.48■■■□□ 2.63
SMC4-206ENST00000465903 ANKRD13AQ8IZ07 590 aa31.48■■■□□ 2.63
SMC4-206ENST00000465903 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.48■■■□□ 2.63
SMC4-206ENST00000465903 HOOK2Q96ED9 719 aa31.48■■■□□ 2.63
SMC4-206ENST00000465903 DDTLA6NHG4 134 aaPredicted RBP31.47■■■□□ 2.63
SMC4-206ENST00000465903 TMED8Q6PL24 325 aaPredicted RBP31.47■■■□□ 2.63
SMC4-206ENST00000465903 SLC10A4Q96EP9 437 aa31.47■■■□□ 2.63
SMC4-206ENST00000465903 MAP3K9P80192 1104 aa31.46■■■□□ 2.63
SMC4-206ENST00000465903 SALL3Q9BXA9 1300 aa31.46■■■□□ 2.63
SMC4-206ENST00000465903 ATRNL1Q5VV63 1379 aa31.45■■■□□ 2.63
SMC4-206ENST00000465903 PDE6AP16499 860 aa31.45■■■□□ 2.63
SMC4-206ENST00000465903 PLCG2P16885 1265 aa31.45■■■□□ 2.63
SMC4-206ENST00000465903 SLC9C2Q5TAH2 1124 aa31.45■■■□□ 2.63
SMC4-206ENST00000465903 MIGA1Q8NAN2 632 aa31.45■■■□□ 2.63
SMC4-206ENST00000465903 CSRNP1Q96S65 589 aa31.45■■■□□ 2.63
SMC4-206ENST00000465903 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.45■■■□□ 2.63
SMC4-206ENST00000465903 LAMB1P07942 1786 aa31.45■■■□□ 2.62
SMC4-206ENST00000465903 TCRBV5S4A2TA0A5A2 114 aa31.44■■■□□ 2.62
SMC4-206ENST00000465903 FOXN1O15353 648 aa31.44■■■□□ 2.62
SMC4-206ENST00000465903 SPRYD7Q5W111 196 aa31.44■■■□□ 2.62
SMC4-206ENST00000465903 DCAF15Q66K64 600 aa31.44■■■□□ 2.62
SMC4-206ENST00000465903 GPATCH3Q96I76 525 aa31.44■■■□□ 2.62
SMC4-206ENST00000465903 ZNF341Q9BYN7 854 aa31.44■■■□□ 2.62
SMC4-206ENST00000465903 OSBPL5Q9H0X9 879 aaPredicted RBP31.44■■■□□ 2.62
SMC4-206ENST00000465903 TTC41PQ6P2S7 1318 aa31.44■■■□□ 2.62
SMC4-206ENST00000465903 SLURP2P0DP57 97 aa31.43■■■□□ 2.62
SMC4-206ENST00000465903 MKRN3Q13064 507 aaKnown RBP31.43■■■□□ 2.62
SMC4-206ENST00000465903 PI4K2BQ8TCG2 481 aa31.43■■■□□ 2.62
SMC4-206ENST00000465903 WNK4Q96J92 1243 aa31.43■■■□□ 2.62
SMC4-206ENST00000465903 ZNF112Q9UJU3 913 aa31.43■■■□□ 2.62
SMC4-206ENST00000465903 MYH1P12882 1939 aa31.43■■■□□ 2.62
SMC4-206ENST00000465903 ZNF532Q9HCE3 1301 aa31.43■■■□□ 2.62
SMC4-206ENST00000465903 MAP3K10Q02779 954 aa31.42■■■□□ 2.62
SMC4-206ENST00000465903 ZSCAN29Q8IWY8 852 aaPredicted RBP31.42■■■□□ 2.62
SMC4-206ENST00000465903 TGFBRAP1Q8WUH2 860 aa31.42■■■□□ 2.62
SMC4-206ENST00000465903 ELP3Q9H9T3 547 aa31.42■■■□□ 2.62
SMC4-206ENST00000465903 SIPA1L1O43166 1804 aa31.42■■■□□ 2.62
SMC4-206ENST00000465903 COL2A1P02458 1487 aaPredicted RBP31.41■■■□□ 2.62
SMC4-206ENST00000465903 GJA5P36382 358 aa31.41■■■□□ 2.62
SMC4-206ENST00000465903 VGLL4Q14135 290 aa31.41■■■□□ 2.62
SMC4-206ENST00000465903 SLFNL1Q499Z3 407 aa31.41■■■□□ 2.62
SMC4-206ENST00000465903 WRNIP1Q96S55 665 aa31.41■■■□□ 2.62
SMC4-206ENST00000465903 RIOK1Q9BRS2 568 aaKnown RBP31.41■■■□□ 2.62
SMC4-206ENST00000465903 CHGBP05060 677 aa31.4■■■□□ 2.62
SMC4-206ENST00000465903 MX1P20591 662 aa31.4■■■□□ 2.62
SMC4-206ENST00000465903 ADD2P35612 726 aa31.4■■■□□ 2.62
SMC4-206ENST00000465903 MAPKAPK5Q8IW41 473 aa31.4■■■□□ 2.62
SMC4-206ENST00000465903 ZKSCAN4Q969J2 545 aaPredicted RBP31.4■■■□□ 2.62
SMC4-206ENST00000465903 ZBTB47Q9UFB7 747 aaPredicted RBP31.4■■■□□ 2.62
SMC4-206ENST00000465903 INPP5BP32019 993 aa31.39■■■□□ 2.62
SMC4-206ENST00000465903 B4GALNT3Q6L9W6 998 aa31.39■■■□□ 2.62
SMC4-206ENST00000465903 CNKSR2Q8WXI2 1034 aa31.38■■■□□ 2.61
SMC4-206ENST00000465903 AIDAQ96BJ3 306 aa31.38■■■□□ 2.61
SMC4-206ENST00000465903 SNCAIPQ9Y6H5 919 aa31.38■■■□□ 2.61
SMC4-206ENST00000465903 FLT1P17948 1338 aa31.38■■■□□ 2.61
SMC4-206ENST00000465903 MAGEB6P1A0A0J9YX57 407 aa31.37■■■□□ 2.61
SMC4-206ENST00000465903 PHF20L1A8MW92 1017 aa31.37■■■□□ 2.61
SMC4-206ENST00000465903 ZBTB48P10074 688 aaPredicted RBP31.37■■■□□ 2.61
SMC4-206ENST00000465903 CERS3Q8IU89 383 aa31.37■■■□□ 2.61
SMC4-206ENST00000465903 REM2Q8IYK8 340 aaPredicted RBP31.37■■■□□ 2.61
SMC4-206ENST00000465903 LNPKQ9C0E8 428 aa31.37■■■□□ 2.61
SMC4-206ENST00000465903 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.37■■■□□ 2.61
SMC4-206ENST00000465903 CSADQ9Y600 493 aa31.37■■■□□ 2.61
SMC4-206ENST00000465903 ERC2O15083 957 aa31.36■■■□□ 2.61
SMC4-206ENST00000465903 TM4SF4P48230 202 aa31.36■■■□□ 2.61
SMC4-206ENST00000465903 OPTNQ96CV9 577 aa31.36■■■□□ 2.61
SMC4-206ENST00000465903 BEGAINQ9BUH8 593 aa31.36■■■□□ 2.61
SMC4-206ENST00000465903 STAP2Q9UGK3 403 aa31.36■■■□□ 2.61
SMC4-206ENST00000465903 TBC1D12O60347 775 aa31.35■■■□□ 2.61
SMC4-206ENST00000465903 GLRX3O76003 335 aaKnown RBP31.35■■■□□ 2.61
SMC4-206ENST00000465903 UBE3CQ15386 1083 aa31.35■■■□□ 2.61
SMC4-206ENST00000465903 KBTBD3Q8NAB2 608 aa31.35■■■□□ 2.61
SMC4-206ENST00000465903 HSPA8P11142 646 aaKnown RBP31.34■■■□□ 2.61
SMC4-206ENST00000465903 NUCB1Q02818 461 aa31.34■■■□□ 2.61
SMC4-206ENST00000465903 SPDYE5A6NIY4 337 aa31.33■■■□□ 2.61
SMC4-206ENST00000465903 CTCFP49711 727 aaPredicted RBP31.33■■■□□ 2.61
SMC4-206ENST00000465903 PDE1AP54750 535 aa31.33■■■□□ 2.61
SMC4-206ENST00000465903 CHD1LQ86WJ1 897 aa31.33■■■□□ 2.61
SMC4-206ENST00000465903 DHX36Q9H2U1 1008 aaKnown RBP31.33■■■□□ 2.61
SMC4-206ENST00000465903 RNF186Q9NXI6 227 aa31.33■■■□□ 2.61
SMC4-206ENST00000465903 NAV1Q8NEY1 1877 aa31.32■■■□□ 2.6
SMC4-206ENST00000465903 FAM196BA6NMK8 535 aa31.32■■■□□ 2.6
SMC4-206ENST00000465903 USP5P45974 858 aa31.32■■■□□ 2.6
SMC4-206ENST00000465903 NOL9Q5SY16 702 aaKnown RBP31.32■■■□□ 2.6
SMC4-206ENST00000465903 LCORLQ8N3X6 602 aa31.32■■■□□ 2.6
SMC4-206ENST00000465903 TSKSQ9UJT2 592 aa31.32■■■□□ 2.6
SMC4-206ENST00000465903 PALD1Q9ULE6 856 aa31.32■■■□□ 2.6
SMC4-206ENST00000465903 ZSCAN25Q6NSZ9 544 aa31.31■■■□□ 2.6
SMC4-206ENST00000465903 ERO1BQ86YB8 467 aa31.31■■■□□ 2.6
SMC4-206ENST00000465903 PI4KBQ9UBF8 816 aa31.31■■■□□ 2.6
SMC4-206ENST00000465903 SAP30BPQ9UHR5 308 aaKnown RBP31.31■■■□□ 2.6
SMC4-206ENST00000465903 DOCK1Q14185 1865 aa31.31■■■□□ 2.6
SMC4-206ENST00000465903 ATAD5Q96QE3 1844 aa31.31■■■□□ 2.6
SMC4-206ENST00000465903 DDX60LQ5H9U9 1706 aaKnown RBP31.3■■■□□ 2.6
SMC4-206ENST00000465903 MANSC4A6NHS7 340 aaPredicted RBP31.3■■■□□ 2.6
SMC4-206ENST00000465903 CA12O43570 354 aa31.3■■■□□ 2.6
SMC4-206ENST00000465903 LBX1P52954 281 aa31.3■■■□□ 2.6
SMC4-206ENST00000465903 OTUD5Q96G74 571 aa31.3■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms