RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 RASA3Q14644 834 aa17.61■□□□□ 0.41
HLA-F-223ENST00000465459 ZNF589Q86UQ0 364 aaPredicted RBP17.61■□□□□ 0.41
HLA-F-223ENST00000465459 RBM46Q8TBY0 533 aaKnown RBP17.61■□□□□ 0.41
HLA-F-223ENST00000465459 DHX36Q9H2U1 1008 aaKnown RBP17.61■□□□□ 0.41
HLA-F-223ENST00000465459 DDX4Q9NQI0 724 aaKnown RBP17.61■□□□□ 0.41
HLA-F-223ENST00000465459 FLT1P17948 1338 aa17.61■□□□□ 0.41
HLA-F-223ENST00000465459 CNTNAP1P78357 1384 aa17.61■□□□□ 0.41
HLA-F-223ENST00000465459 GSG1L2A8MUP6 293 aa17.6■□□□□ 0.41
HLA-F-223ENST00000465459 ALX1Q15699 326 aa17.6■□□□□ 0.41
HLA-F-223ENST00000465459 CCDC129Q6ZRS4 1044 aa17.6■□□□□ 0.41
HLA-F-223ENST00000465459 MAPKAPK5Q8IW41 473 aa17.6■□□□□ 0.41
HLA-F-223ENST00000465459 HOOK2Q96ED9 719 aa17.6■□□□□ 0.41
HLA-F-223ENST00000465459 DSCC1Q9BVC3 393 aa17.6■□□□□ 0.41
HLA-F-223ENST00000465459 OSBPL5Q9H0X9 879 aaPredicted RBP17.6■□□□□ 0.41
HLA-F-223ENST00000465459 DCP1AQ9NPI6 582 aaPredicted RBP17.6■□□□□ 0.41
HLA-F-223ENST00000465459 TAOK2Q9UL54 1235 aa17.6■□□□□ 0.41
HLA-F-223ENST00000465459 ATRNL1Q5VV63 1379 aa17.6■□□□□ 0.41
HLA-F-223ENST00000465459 ZMYM6O95789 1325 aa17.59■□□□□ 0.41
HLA-F-223ENST00000465459 PRKAB2O43741 272 aa17.59■□□□□ 0.41
HLA-F-223ENST00000465459 HSPD1P10809 573 aaKnown RBP17.59■□□□□ 0.41
HLA-F-223ENST00000465459 PICALMQ13492 652 aa17.59■□□□□ 0.41
HLA-F-223ENST00000465459 KIAA1211Q6ZU35 1233 aa17.59■□□□□ 0.41
HLA-F-223ENST00000465459 SMC1BQ8NDV3 1235 aa17.59■□□□□ 0.41
HLA-F-223ENST00000465459 SDR42E1Q8WUS8 393 aa17.59■□□□□ 0.41
HLA-F-223ENST00000465459 FOCADQ5VW36 1801 aa17.58■□□□□ 0.41
HLA-F-223ENST00000465459 APPP05067 770 aa17.58■□□□□ 0.4
HLA-F-223ENST00000465459 TCP10Q12799 353 aa17.58■□□□□ 0.4
HLA-F-223ENST00000465459 SUPT20HL1Q3ZLR7 823 aa17.58■□□□□ 0.4
HLA-F-223ENST00000465459 MAP1SQ66K74 1059 aaPredicted RBP17.58■□□□□ 0.4
HLA-F-223ENST00000465459 TTC6Q86TZ1 520 aa17.58■□□□□ 0.4
HLA-F-223ENST00000465459 USP48Q86UV5 1035 aa17.58■□□□□ 0.4
HLA-F-223ENST00000465459 AMOTL1Q8IY63 956 aa17.58■□□□□ 0.4
HLA-F-223ENST00000465459 IFNL3Q8IZI9 196 aa17.58■□□□□ 0.4
HLA-F-223ENST00000465459 IL25Q9H293 177 aa17.58■□□□□ 0.4
HLA-F-223ENST00000465459 POLR2AP24928 1970 aaKnown RBP17.58■□□□□ 0.4
HLA-F-223ENST00000465459 CDK5RAP2Q96SN8 1893 aa17.57■□□□□ 0.4
HLA-F-223ENST00000465459 FOXP2O15409 715 aa17.57■□□□□ 0.4
HLA-F-223ENST00000465459 EPB41L2O43491 1005 aaKnown RBP17.57■□□□□ 0.4
HLA-F-223ENST00000465459 FSTL1Q12841 308 aa17.57■□□□□ 0.4
HLA-F-223ENST00000465459 SBK1Q52WX2 424 aa17.57■□□□□ 0.4
HLA-F-223ENST00000465459 TEPSINQ96N21 525 aa17.57■□□□□ 0.4
HLA-F-223ENST00000465459 GLIS2Q9BZE0 524 aaPredicted RBP17.57■□□□□ 0.4
HLA-F-223ENST00000465459 TMEM39BQ9GZU3 492 aa17.57■□□□□ 0.4
HLA-F-223ENST00000465459 MCM9Q9NXL9 1143 aa17.57■□□□□ 0.4
HLA-F-223ENST00000465459 ARPP21Q9UBL0 812 aaPredicted RBP17.57■□□□□ 0.4
HLA-F-223ENST00000465459 ADM5C9JUS6 153 aa17.56■□□□□ 0.4
HLA-F-223ENST00000465459 REC8O95072 547 aa17.56■□□□□ 0.4
HLA-F-223ENST00000465459 ITGBL1O95965 494 aaPredicted RBP17.56■□□□□ 0.4
HLA-F-223ENST00000465459 HLA-DOAP06340 250 aa17.56■□□□□ 0.4
HLA-F-223ENST00000465459 TDO2P48775 406 aa17.56■□□□□ 0.4
HLA-F-223ENST00000465459 VPS53Q5VIR6 699 aa17.56■□□□□ 0.4
HLA-F-223ENST00000465459 FOXP4Q8IVH2 680 aaPredicted RBP17.56■□□□□ 0.4
HLA-F-223ENST00000465459 ZSCAN29Q8IWY8 852 aaPredicted RBP17.56■□□□□ 0.4
HLA-F-223ENST00000465459 ZFPM1Q8IX07 1006 aa17.56■□□□□ 0.4
HLA-F-223ENST00000465459 NAPBQ9H115 298 aa17.56■□□□□ 0.4
HLA-F-223ENST00000465459 EPB41L4AQ9HCS5 686 aaPredicted RBP17.56■□□□□ 0.4
HLA-F-223ENST00000465459 PI4KBQ9UBF8 816 aa17.56■□□□□ 0.4
HLA-F-223ENST00000465459 CTNNA3Q9UI47 895 aa17.56■□□□□ 0.4
HLA-F-223ENST00000465459 DDTLA6NHG4 134 aaPredicted RBP17.55■□□□□ 0.4
HLA-F-223ENST00000465459 USP17L12C9JPN9 530 aa17.55■□□□□ 0.4
HLA-F-223ENST00000465459 USP17L21D6R901 530 aa17.55■□□□□ 0.4
HLA-F-223ENST00000465459 FGAP02671 866 aa17.55■□□□□ 0.4
HLA-F-223ENST00000465459 POLR3DP05423 398 aaPredicted RBP17.55■□□□□ 0.4
HLA-F-223ENST00000465459 CTR9Q6PD62 1173 aa17.55■□□□□ 0.4
HLA-F-223ENST00000465459 SH3BP5LQ7L8J4 393 aa17.55■□□□□ 0.4
HLA-F-223ENST00000465459 MAP4K1Q92918 833 aa17.55■□□□□ 0.4
HLA-F-223ENST00000465459 CDCA5Q96FF9 252 aa17.55■□□□□ 0.4
HLA-F-223ENST00000465459 CSRNP1Q96S65 589 aa17.55■□□□□ 0.4
HLA-F-223ENST00000465459 EHD4Q9H223 541 aa17.55■□□□□ 0.4
HLA-F-223ENST00000465459 PALD1Q9ULE6 856 aa17.55■□□□□ 0.4
HLA-F-223ENST00000465459 TBC1D12O60347 775 aa17.54■□□□□ 0.4
HLA-F-223ENST00000465459 NF2P35240 595 aa17.54■□□□□ 0.4
HLA-F-223ENST00000465459 MAP3K10Q02779 954 aa17.54■□□□□ 0.4
HLA-F-223ENST00000465459 C12orf60Q5U649 245 aa17.54■□□□□ 0.4
HLA-F-223ENST00000465459 METTL16Q86W50 562 aaKnown RBP17.54■□□□□ 0.4
HLA-F-223ENST00000465459 LSG1Q9H089 658 aaKnown RBP17.54■□□□□ 0.4
HLA-F-223ENST00000465459 ANO2Q9NQ90 1003 aa17.54■□□□□ 0.4
HLA-F-223ENST00000465459 SAP30BPQ9UHR5 308 aaKnown RBP17.54■□□□□ 0.4
HLA-F-223ENST00000465459 HERC5Q9UII4 1024 aaKnown RBP17.54■□□□□ 0.4
HLA-F-223ENST00000465459 U3KPZ7 1027 aaPredicted RBP17.54■□□□□ 0.4
HLA-F-223ENST00000465459 DDX60LQ5H9U9 1706 aaKnown RBP17.53■□□□□ 0.4
HLA-F-223ENST00000465459 NAV1Q8NEY1 1877 aa17.53■□□□□ 0.4
HLA-F-223ENST00000465459 NBPF12Q5TAG4 269 aaPredicted RBP17.53■□□□□ 0.4
HLA-F-223ENST00000465459 DCAF15Q66K64 600 aa17.53■□□□□ 0.4
HLA-F-223ENST00000465459 SCAF8Q9UPN6 1271 aaKnown RBP17.53■□□□□ 0.4
HLA-F-223ENST00000465459 MYH1P12882 1939 aa17.53■□□□□ 0.4
HLA-F-223ENST00000465459 PTH1RQ03431 593 aa17.52■□□□□ 0.4
HLA-F-223ENST00000465459 C8orf34Q49A92 452 aa17.52■□□□□ 0.4
HLA-F-223ENST00000465459 SERPINB13Q9UIV8 391 aa17.52■□□□□ 0.4
HLA-F-223ENST00000465459 ANAPC4Q9UJX5 808 aa17.52■□□□□ 0.4
HLA-F-223ENST00000465459 ROBO3Q96MS0 1386 aa17.52■□□□□ 0.39
HLA-F-223ENST00000465459 PASKQ96RG2 1323 aa17.51■□□□□ 0.39
HLA-F-223ENST00000465459 PPP1R12BO60237 982 aaPredicted RBP17.51■□□□□ 0.39
HLA-F-223ENST00000465459 SLC3A2P08195 630 aaKnown RBP17.51■□□□□ 0.39
HLA-F-223ENST00000465459 PLCD1P51178 756 aa17.51■□□□□ 0.39
HLA-F-223ENST00000465459 FKBP1BP68106 108 aa17.51■□□□□ 0.39
HLA-F-223ENST00000465459 ZNF287Q9HBT7 754 aa17.51■□□□□ 0.39
HLA-F-223ENST00000465459 SWAP70Q9UH65 585 aa17.51■□□□□ 0.39
HLA-F-223ENST00000465459 BAZ2AQ9UIF9 1905 aaKnown RBP17.51■□□□□ 0.39
HLA-F-223ENST00000465459 MINDY4BA8MYZ0 360 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms