RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 ERVK-24P63145 666 aa8.56□□□□□ -1.04
UBR4-209ENST00000465036 EMILIN2Q9BXX0 1053 aa8.56□□□□□ -1.04
UBR4-209ENST00000465036 GPN3Q9UHW5 284 aaPredicted RBP8.56□□□□□ -1.04
UBR4-209ENST00000465036 CD8BP10966 210 aa8.55□□□□□ -1.04
UBR4-209ENST00000465036 NME2P22392 152 aa8.55□□□□□ -1.04
UBR4-209ENST00000465036 BNIP3Q12983 259 aa8.55□□□□□ -1.04
UBR4-209ENST00000465036 SULF2Q8IWU5 870 aa8.55□□□□□ -1.04
UBR4-209ENST00000465036 RNF214Q8ND24 703 aa8.55□□□□□ -1.04
UBR4-209ENST00000465036 BCO2Q9BYV7 579 aa8.55□□□□□ -1.04
UBR4-209ENST00000465036 TMEM265A0A087WTH1 108 aa8.54□□□□□ -1.04
UBR4-209ENST00000465036 SOWAHDA6NJG2 315 aa8.54□□□□□ -1.04
UBR4-209ENST00000465036 RNGTTO60942 597 aaKnown RBP8.54□□□□□ -1.04
UBR4-209ENST00000465036 NEFMP07197 916 aa8.54□□□□□ -1.04
UBR4-209ENST00000465036 HCLS1P14317 486 aaPredicted RBP8.54□□□□□ -1.04
UBR4-209ENST00000465036 OXCT1P55809 520 aa8.54□□□□□ -1.04
UBR4-209ENST00000465036 ZNF252P-AS1Q0IIN9 211 aa8.54□□□□□ -1.04
UBR4-209ENST00000465036 TMC7Q7Z402 723 aa8.54□□□□□ -1.04
UBR4-209ENST00000465036 C14orf37Q86TY3 774 aa8.54□□□□□ -1.04
UBR4-209ENST00000465036 FAM181AQ8N9Y4 354 aa8.54□□□□□ -1.04
UBR4-209ENST00000465036 KCNB2Q92953 911 aa8.54□□□□□ -1.04
UBR4-209ENST00000465036 SNX11Q9Y5W9 270 aa8.54□□□□□ -1.04
UBR4-209ENST00000465036 CEACAM5P06731 702 aa8.53□□□□□ -1.04
UBR4-209ENST00000465036 DSC3Q14574 896 aa8.53□□□□□ -1.04
UBR4-209ENST00000465036 ISL2Q96A47 359 aa8.53□□□□□ -1.04
UBR4-209ENST00000465036 TNKS2Q9H2K2 1166 aa8.53□□□□□ -1.04
UBR4-209ENST00000465036 GNEQ9Y223 722 aaKnown RBP8.53□□□□□ -1.04
UBR4-209ENST00000465036 CARMIL2Q6F5E8 1435 aa8.53□□□□□ -1.04
UBR4-209ENST00000465036 LEFTY1O75610 366 aa8.52□□□□□ -1.05
UBR4-209ENST00000465036 SCARA3Q6AZY7 606 aa8.52□□□□□ -1.05
UBR4-209ENST00000465036 STK35Q8TDR2 534 aa8.52□□□□□ -1.05
UBR4-209ENST00000465036 HRASLS5Q96KN8 279 aa8.52□□□□□ -1.05
UBR4-209ENST00000465036 MBNL3Q9NUK0 354 aaKnown RBP8.52□□□□□ -1.05
UBR4-209ENST00000465036 DCTN4Q9UJW0 460 aa8.52□□□□□ -1.05
UBR4-209ENST00000465036 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.52□□□□□ -1.05
UBR4-209ENST00000465036 U3KQE9 123 aa8.52□□□□□ -1.05
UBR4-209ENST00000465036 IGF2BP3O00425 579 aaKnown RBP eCLIP8.51□□□□□ -1.05
UBR4-209ENST00000465036 RNASE1P07998 156 aaKnown RBP8.51□□□□□ -1.05
UBR4-209ENST00000465036 ENOX2Q16206 610 aaKnown RBP8.51□□□□□ -1.05
UBR4-209ENST00000465036 LCE1DQ5T752 114 aa8.51□□□□□ -1.05
UBR4-209ENST00000465036 PI16Q6UXB8 463 aa8.51□□□□□ -1.05
UBR4-209ENST00000465036 FAM214BQ7L5A3 538 aa8.51□□□□□ -1.05
UBR4-209ENST00000465036 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.51□□□□□ -1.05
UBR4-209ENST00000465036 RETREG2Q8NC44 543 aa8.51□□□□□ -1.05
UBR4-209ENST00000465036 ANKRD24Q8TF21 1146 aa8.51□□□□□ -1.05
UBR4-209ENST00000465036 RC3H2Q9HBD1 1191 aaKnown RBP8.51□□□□□ -1.05
UBR4-209ENST00000465036 PLAGL2Q9UPG8 496 aa8.51□□□□□ -1.05
UBR4-209ENST00000465036 AOC3Q16853 763 aa8.5□□□□□ -1.05
UBR4-209ENST00000465036 C3orf58Q8NDZ4 430 aa8.5□□□□□ -1.05
UBR4-209ENST00000465036 PI4K2BQ8TCG2 481 aa8.5□□□□□ -1.05
UBR4-209ENST00000465036 TMEM40Q8WWA1 233 aa8.5□□□□□ -1.05
UBR4-209ENST00000465036 NECAB3Q96P71 396 aaPredicted RBP8.5□□□□□ -1.05
UBR4-209ENST00000465036 SRCIN1Q9C0H9 1055 aa8.5□□□□□ -1.05
UBR4-209ENST00000465036 TREHO43280 583 aa8.49□□□□□ -1.05
UBR4-209ENST00000465036 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.49□□□□□ -1.05
UBR4-209ENST00000465036 ANGEL2Q5VTE6 544 aaKnown RBP8.49□□□□□ -1.05
UBR4-209ENST00000465036 SLC23A3Q6PIS1 610 aa8.49□□□□□ -1.05
UBR4-209ENST00000465036 NXPE4Q6UWF7 544 aa8.49□□□□□ -1.05
UBR4-209ENST00000465036 ARHGAP27Q6ZUM4 889 aa8.49□□□□□ -1.05
UBR4-209ENST00000465036 GPBAR1Q8TDU6 330 aa8.49□□□□□ -1.05
UBR4-209ENST00000465036 ADAMTS6Q9UKP5 1117 aa8.49□□□□□ -1.05
UBR4-209ENST00000465036 PPM1HQ9ULR3 514 aa8.49□□□□□ -1.05
UBR4-209ENST00000465036 AKAP2Q9Y2D5 859 aa8.49□□□□□ -1.05
UBR4-209ENST00000465036 PLCB3Q01970 1234 aa8.48□□□□□ -1.05
UBR4-209ENST00000465036 RING1Q06587 406 aa8.48□□□□□ -1.05
UBR4-209ENST00000465036 MAP1SQ66K74 1059 aaPredicted RBP8.48□□□□□ -1.05
UBR4-209ENST00000465036 TOP6BLQ8N6T0 577 aa8.48□□□□□ -1.05
UBR4-209ENST00000465036 FBF1Q8TES7 1133 aa8.48□□□□□ -1.05
UBR4-209ENST00000465036 HEXIM2Q96MH2 286 aaKnown RBP8.48□□□□□ -1.05
UBR4-209ENST00000465036 CEP44Q9C0F1 390 aa8.48□□□□□ -1.05
UBR4-209ENST00000465036 SSU72Q9NP77 194 aaKnown RBP8.48□□□□□ -1.05
UBR4-209ENST00000465036 GTF2IRD1Q9UHL9 959 aa8.48□□□□□ -1.05
UBR4-209ENST00000465036 SAMM50Q9Y512 469 aa8.48□□□□□ -1.05
UBR4-209ENST00000465036 TRIM37O94972 964 aa8.47□□□□□ -1.05
UBR4-209ENST00000465036 GSTT1P30711 240 aa8.47□□□□□ -1.05
UBR4-209ENST00000465036 NTF4P34130 210 aa8.47□□□□□ -1.05
UBR4-209ENST00000465036 FLAD1Q8NFF5 587 aa8.47□□□□□ -1.05
UBR4-209ENST00000465036 FAM168AQ92567 244 aa8.47□□□□□ -1.05
UBR4-209ENST00000465036 PNMA6FA0A0J9YX94 578 aa8.46□□□□□ -1.06
UBR4-209ENST00000465036 GIPC1O14908 333 aa8.46□□□□□ -1.06
UBR4-209ENST00000465036 FANCGO15287 622 aa8.46□□□□□ -1.06
UBR4-209ENST00000465036 FARP2O94887 1054 aaPredicted RBP8.46□□□□□ -1.06
UBR4-209ENST00000465036 BMP6P22004 513 aa8.46□□□□□ -1.06
UBR4-209ENST00000465036 LRRN4CLQ8ND94 238 aa8.46□□□□□ -1.06
UBR4-209ENST00000465036 ASB11Q8WXH4 323 aa8.46□□□□□ -1.06
UBR4-209ENST00000465036 ENC1O14682 589 aa8.45□□□□□ -1.06
UBR4-209ENST00000465036 CD96P40200 585 aa8.45□□□□□ -1.06
UBR4-209ENST00000465036 KCT2Q8NC54 265 aa8.45□□□□□ -1.06
UBR4-209ENST00000465036 ACSBG1Q96GR2 724 aa8.45□□□□□ -1.06
UBR4-209ENST00000465036 PRDM10Q9NQV6 1147 aa8.45□□□□□ -1.06
UBR4-209ENST00000465036 CBX8Q9HC52 389 aa8.44□□□□□ -1.06
UBR4-209ENST00000465036 LRRC14Q15048 493 aa8.43□□□□□ -1.06
UBR4-209ENST00000465036 PPM1JQ5JR12 505 aa8.43□□□□□ -1.06
UBR4-209ENST00000465036 ZNF648Q5T619 568 aaPredicted RBP8.43□□□□□ -1.06
UBR4-209ENST00000465036 SPACA3Q8IXA5 215 aa8.43□□□□□ -1.06
UBR4-209ENST00000465036 BHLHE22Q8NFJ8 381 aaPredicted RBP8.43□□□□□ -1.06
UBR4-209ENST00000465036 BIN2Q9UBW5 565 aaPredicted RBP8.43□□□□□ -1.06
UBR4-209ENST00000465036 DBX1A6NMT0 343 aa8.42□□□□□ -1.06
UBR4-209ENST00000465036 BRD1O95696 1058 aa8.42□□□□□ -1.06
UBR4-209ENST00000465036 CLCN7P51798 805 aa8.42□□□□□ -1.06
UBR4-209ENST00000465036 ZBTB37Q5TC79 503 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms