RNA–Protein interactions for RNA: ENST00000464940.1

KPNA1-202, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-202ENST00000464940 CDK13Q14004 1512 aaKnown RBP8.65□□□□□ -1.02
KPNA1-202ENST00000464940 PTPRMP28827 1452 aa8.65□□□□□ -1.02
KPNA1-202ENST00000464940 FMN1Q68DA7 1419 aa8.65□□□□□ -1.02
KPNA1-202ENST00000464940 AKNAQ7Z591 1439 aa8.65□□□□□ -1.02
KPNA1-202ENST00000464940 EREGO14944 169 aa8.65□□□□□ -1.02
KPNA1-202ENST00000464940 KANSL3Q9P2N6 904 aa8.65□□□□□ -1.02
KPNA1-202ENST00000464940 IREB2P48200 963 aaKnown RBP8.64□□□□□ -1.03
KPNA1-202ENST00000464940 EGFLAMQ63HQ2 1017 aa8.64□□□□□ -1.03
KPNA1-202ENST00000464940 MSL1Q68DK7 614 aa8.64□□□□□ -1.03
KPNA1-202ENST00000464940 ERMP1Q7Z2K6 904 aa8.64□□□□□ -1.03
KPNA1-202ENST00000464940 FBXO11Q86XK2 927 aa8.64□□□□□ -1.03
KPNA1-202ENST00000464940 CACTIN-AS1Q8N1I8 211 aa8.64□□□□□ -1.03
KPNA1-202ENST00000464940 PBX4Q9BYU1 374 aa8.64□□□□□ -1.03
KPNA1-202ENST00000464940 MAGI2Q86UL8 1455 aa8.64□□□□□ -1.03
KPNA1-202ENST00000464940 KIF14Q15058 1648 aa8.63□□□□□ -1.03
KPNA1-202ENST00000464940 PAX4O43316 350 aa8.63□□□□□ -1.03
KPNA1-202ENST00000464940 EDN3P14138 238 aa8.63□□□□□ -1.03
KPNA1-202ENST00000464940 NFE2L2Q16236 605 aa8.63□□□□□ -1.03
KPNA1-202ENST00000464940 ZNF746Q6NUN9 644 aaPredicted RBP8.63□□□□□ -1.03
KPNA1-202ENST00000464940 NXPE4Q6UWF7 544 aa8.63□□□□□ -1.03
KPNA1-202ENST00000464940 CKAP2LQ8IYA6 745 aa8.63□□□□□ -1.03
KPNA1-202ENST00000464940 RASGRP4Q8TDF6 673 aa8.63□□□□□ -1.03
KPNA1-202ENST00000464940 BCO2Q9BYV7 579 aa8.63□□□□□ -1.03
KPNA1-202ENST00000464940 PPP4R2Q9NY27 417 aa8.63□□□□□ -1.03
KPNA1-202ENST00000464940 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.63□□□□□ -1.03
KPNA1-202ENST00000464940 ZFYVE16Q7Z3T8 1539 aa8.63□□□□□ -1.03
KPNA1-202ENST00000464940 ARHGAP35Q9NRY4 1499 aa8.63□□□□□ -1.03
KPNA1-202ENST00000464940 RIMS1Q86UR5 1692 aaKnown RBP8.62□□□□□ -1.03
KPNA1-202ENST00000464940 NFKBIEO00221 500 aa8.62□□□□□ -1.03
KPNA1-202ENST00000464940 GADD45BO75293 160 aaPredicted RBP8.62□□□□□ -1.03
KPNA1-202ENST00000464940 SMNDC1O75940 238 aaKnown RBP eCLIP8.62□□□□□ -1.03
KPNA1-202ENST00000464940 NOS3P29474 1203 aa8.62□□□□□ -1.03
KPNA1-202ENST00000464940 PRR23CQ6ZRP0 262 aa8.62□□□□□ -1.03
KPNA1-202ENST00000464940 GALNT12Q8IXK2 581 aa8.62□□□□□ -1.03
KPNA1-202ENST00000464940 SEC16BQ96JE7 1060 aa8.62□□□□□ -1.03
KPNA1-202ENST00000464940 RASSF4Q9H2L5 321 aa8.62□□□□□ -1.03
KPNA1-202ENST00000464940 NPHS2Q9NP85 383 aa8.62□□□□□ -1.03
KPNA1-202ENST00000464940 COPRSQ9NQ92 184 aa8.62□□□□□ -1.03
KPNA1-202ENST00000464940 PCMTD2Q9NV79 361 aa8.62□□□□□ -1.03
KPNA1-202ENST00000464940 DZANK1Q9NVP4 752 aa8.62□□□□□ -1.03
KPNA1-202ENST00000464940 PLCH2O75038 1416 aa8.62□□□□□ -1.03
KPNA1-202ENST00000464940 PCF11O94913 1555 aaKnown RBP8.61□□□□□ -1.03
KPNA1-202ENST00000464940 LRRIQ1Q96JM4 1722 aa8.61□□□□□ -1.03
KPNA1-202ENST00000464940 CLSTN1O94985 981 aa8.61□□□□□ -1.03
KPNA1-202ENST00000464940 ATP11AP98196 1134 aa8.61□□□□□ -1.03
KPNA1-202ENST00000464940 BMS1Q14692 1282 aaKnown RBP8.61□□□□□ -1.03
KPNA1-202ENST00000464940 NBPF6Q5VWK0 638 aa8.61□□□□□ -1.03
KPNA1-202ENST00000464940 CEP135Q66GS9 1140 aa8.61□□□□□ -1.03
KPNA1-202ENST00000464940 MRFAP1L1Q96HT8 127 aa8.61□□□□□ -1.03
KPNA1-202ENST00000464940 NBPF4Q96M43 638 aa8.61□□□□□ -1.03
KPNA1-202ENST00000464940 RSRP1Q9BUV0 290 aa8.61□□□□□ -1.03
KPNA1-202ENST00000464940 NOC4LQ9BVI4 516 aaKnown RBP8.61□□□□□ -1.03
KPNA1-202ENST00000464940 POGZQ7Z3K3 1410 aa8.61□□□□□ -1.03
KPNA1-202ENST00000464940 FER1L4A9Z1Z3 1794 aa8.61□□□□□ -1.03
KPNA1-202ENST00000464940 SIGLEC1Q9BZZ2 1709 aa8.6□□□□□ -1.03
KPNA1-202ENST00000464940 TXKP42681 527 aa8.6□□□□□ -1.03
KPNA1-202ENST00000464940 PWP1Q13610 501 aa8.6□□□□□ -1.03
KPNA1-202ENST00000464940 IGF2-ASQ6U949 168 aa8.6□□□□□ -1.03
KPNA1-202ENST00000464940 SLC51AQ86UW1 340 aa8.6□□□□□ -1.03
KPNA1-202ENST00000464940 MEGF10Q96KG7 1140 aa8.6□□□□□ -1.03
KPNA1-202ENST00000464940 POP1Q99575 1024 aaKnown RBP8.6□□□□□ -1.03
KPNA1-202ENST00000464940 SPON2Q9BUD6 331 aa8.6□□□□□ -1.03
KPNA1-202ENST00000464940 KBTBD4Q9NVX7 518 aa8.6□□□□□ -1.03
KPNA1-202ENST00000464940 ARID4BQ4LE39 1312 aaPredicted RBP8.59□□□□□ -1.03
KPNA1-202ENST00000464940 POLR3DP05423 398 aaPredicted RBP8.59□□□□□ -1.03
KPNA1-202ENST00000464940 SSBP05455 408 aaKnown RBP eCLIP8.59□□□□□ -1.03
KPNA1-202ENST00000464940 GSTT1P30711 240 aa8.59□□□□□ -1.03
KPNA1-202ENST00000464940 PEAR1Q5VY43 1037 aaPredicted RBP8.59□□□□□ -1.03
KPNA1-202ENST00000464940 GDF6Q6KF10 455 aaPredicted RBP8.59□□□□□ -1.03
KPNA1-202ENST00000464940 RELL1Q8IUW5 271 aa8.59□□□□□ -1.03
KPNA1-202ENST00000464940 NLGN1Q8N2Q7 840 aa8.59□□□□□ -1.03
KPNA1-202ENST00000464940 IL22RA1Q8N6P7 574 aa8.59□□□□□ -1.03
KPNA1-202ENST00000464940 OSMRQ99650 979 aa8.59□□□□□ -1.03
KPNA1-202ENST00000464940 TRIM33Q9UPN9 1127 aa8.59□□□□□ -1.03
KPNA1-202ENST00000464940 CLIP1P30622 1438 aa8.59□□□□□ -1.03
KPNA1-202ENST00000464940 TROQ12816 1431 aaPredicted RBP8.59□□□□□ -1.03
KPNA1-202ENST00000464940 LMTK3Q96Q04 1460 aa8.58□□□□□ -1.04
KPNA1-202ENST00000464940 SCAPERQ9BY12 1400 aa8.58□□□□□ -1.04
KPNA1-202ENST00000464940 YEATS2Q9ULM3 1422 aa8.58□□□□□ -1.04
KPNA1-202ENST00000464940 PDE2AO00408 941 aaPredicted RBP8.58□□□□□ -1.04
KPNA1-202ENST00000464940 WFDC8Q8IUA0 241 aa8.58□□□□□ -1.04
KPNA1-202ENST00000464940 KIAA0825Q8IV33 1275 aa8.58□□□□□ -1.04
KPNA1-202ENST00000464940 TMEM102Q8N9M5 508 aaPredicted RBP8.58□□□□□ -1.04
KPNA1-202ENST00000464940 NXPE3Q969Y0 559 aa8.58□□□□□ -1.04
KPNA1-202ENST00000464940 ADAM19Q9H013 955 aa8.58□□□□□ -1.04
KPNA1-202ENST00000464940 TTF2Q9UNY4 1162 aaKnown RBP8.58□□□□□ -1.04
KPNA1-202ENST00000464940 CCDC18Q5T9S5 1454 aa8.57□□□□□ -1.04
KPNA1-202ENST00000464940 ZNF518AQ6AHZ1 1483 aa8.57□□□□□ -1.04
KPNA1-202ENST00000464940 KDM5CP41229 1560 aa8.57□□□□□ -1.04
KPNA1-202ENST00000464940 TRPA1O75762 1119 aa8.57□□□□□ -1.04
KPNA1-202ENST00000464940 ACPPP15309 386 aa8.57□□□□□ -1.04
KPNA1-202ENST00000464940 KIAA0319Q5VV43 1072 aa8.57□□□□□ -1.04
KPNA1-202ENST00000464940 MKL1Q969V6 931 aa8.57□□□□□ -1.04
KPNA1-202ENST00000464940 FMNL2Q96PY5 1086 aa8.57□□□□□ -1.04
KPNA1-202ENST00000464940 ZKSCAN3Q9BRR0 538 aa8.57□□□□□ -1.04
KPNA1-202ENST00000464940 MUC3BQ9H195 1237 aa8.57□□□□□ -1.04
KPNA1-202ENST00000464940 ARHGAP5Q13017 1502 aa8.57□□□□□ -1.04
KPNA1-202ENST00000464940 PREX2Q70Z35 1606 aa8.57□□□□□ -1.04
KPNA1-202ENST00000464940 CDC42BPBQ9Y5S2 1711 aa8.57□□□□□ -1.04
KPNA1-202ENST00000464940 C9orf84Q5VXU9 1444 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms