RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 PAFAH1B1P43034 410 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 IRAK1P51617 712 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 VSNL1P62760 191 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 DDR1Q08345 913 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 NCAPHQ15003 741 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 MTHFSDQ2M296 383 aaKnown RBP4.38□□□□□ -1.71
CCNL1-204ENST00000464316 USPL1Q5W0Q7 1092 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 ALS2CLQ60I27 953 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 CEP57Q86XR8 500 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 ELOA2Q8IYF1 753 aaPredicted RBP4.38□□□□□ -1.71
CCNL1-204ENST00000464316 RUBCNQ92622 972 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 TRIM6Q9C030 488 aaPredicted RBP4.38□□□□□ -1.71
CCNL1-204ENST00000464316 HAUS4Q9H6D7 363 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 ACTR5Q9H9F9 607 aaPredicted RBP4.38□□□□□ -1.71
CCNL1-204ENST00000464316 DBF4Q9UBU7 674 aaPredicted RBP4.38□□□□□ -1.71
CCNL1-204ENST00000464316 KCNH3Q9ULD8 1083 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 IQSEC3Q9UPP2 1182 aaPredicted RBP4.38□□□□□ -1.71
CCNL1-204ENST00000464316 SAR1BQ9Y6B6 198 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 SBNO1A3KN83 1393 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 MON2Q7Z3U7 1717 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 A0A0D9SFI3 127 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 ANKRD65E5RJM6 399 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 NEBLO76041 1014 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 CLNS1AP54105 237 aaKnown RBP4.38□□□□□ -1.71
CCNL1-204ENST00000464316 CRYMQ14894 314 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 SLMAPQ14BN4 828 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 PPP2R5AQ15172 486 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 CCDC181Q5TID7 509 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 NFATC2IPQ8NCF5 419 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 KIFC2Q96AC6 838 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 NUP88Q99567 741 aaPredicted RBP4.38□□□□□ -1.71
CCNL1-204ENST00000464316 DESI2Q9BSY9 194 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 ANKZF1Q9H8Y5 726 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 LTBP4Q8N2S1 1624 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 TCHHQ07283 1943 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 PXDNLA1KZ92 1463 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 A0A087WWV3 80 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 MEFVO15553 781 aaPredicted RBP4.38□□□□□ -1.71
CCNL1-204ENST00000464316 USO1O60763 962 aaKnown RBP4.38□□□□□ -1.71
CCNL1-204ENST00000464316 PPFIA3O75145 1194 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 VAV2P52735 878 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 USP14P54578 494 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 PLCB4Q15147 1175 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 SNCBQ16143 134 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 TOGARAM2Q6ZUX3 1019 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 TEX11Q8IYF3 940 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 CNPY4Q8N129 248 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 SLC35F6Q8N357 371 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 CARD10Q9BWT7 1032 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 HELLSQ9NRZ9 838 aa4.38□□□□□ -1.71
CCNL1-204ENST00000464316 N4BP3O15049 544 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 EIF3HO15372 352 aaKnown RBP eCLIP4.37□□□□□ -1.71
CCNL1-204ENST00000464316 N4BP1O75113 896 aaKnown RBP4.37□□□□□ -1.71
CCNL1-204ENST00000464316 ATP5JP18859 108 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 MARCKSP29966 332 aaPredicted RBP4.37□□□□□ -1.71
CCNL1-204ENST00000464316 CYLC1P35663 651 aaPredicted RBP4.37□□□□□ -1.71
CCNL1-204ENST00000464316 NBPF9Q3BBW0 867 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 RASGRP2Q7LDG7 609 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 TAX1BP1Q86VP1 789 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 KRI1Q8N9T8 703 aaKnown RBP4.37□□□□□ -1.71
CCNL1-204ENST00000464316 TC2NQ8N9U0 490 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 N4BP2L2Q92802 583 aaPredicted RBP4.37□□□□□ -1.71
CCNL1-204ENST00000464316 PYM1Q9BRP8 204 aaKnown RBP4.37□□□□□ -1.71
CCNL1-204ENST00000464316 DSCC1Q9BVC3 393 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 BATF3Q9NR55 127 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 SPATS2LQ9NUQ6 558 aaKnown RBP4.37□□□□□ -1.71
CCNL1-204ENST00000464316 FAM184BQ9ULE4 1060 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 PCDHA5Q9Y5H7 936 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 N4BP2Q86UW6 1770 aaPredicted RBP4.37□□□□□ -1.71
CCNL1-204ENST00000464316 ATXN2Q99700 1313 aaKnown RBP4.37□□□□□ -1.71
CCNL1-204ENST00000464316 ADCY9O60503 1353 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 GOLGA6L10A0A0M3HER8 536 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 ANKRD18BA2A2Z9 1011 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 SEMA3EO15041 775 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 C21orf2O43822 256 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 GCFC2P16383 781 aaKnown RBP4.37□□□□□ -1.71
CCNL1-204ENST00000464316 PDIA3P30101 505 aaKnown RBP4.37□□□□□ -1.71
CCNL1-204ENST00000464316 TBX2Q13207 712 aaPredicted RBP4.37□□□□□ -1.71
CCNL1-204ENST00000464316 CCDC40Q4G0X9 1142 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 HSP90AB2PQ58FF8 381 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 TTC39AQ5SRH9 613 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 BEND3Q5T5X7 828 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 AP1ARQ63HQ0 302 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 FOXR1Q6PIV2 292 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 IQCA1Q86XH1 822 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 LINS1Q8NG48 757 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 TBC1D22AQ8WUA7 517 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 PNKPQ96T60 521 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 LRRC2Q9BYS8 371 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 FTOQ9C0B1 505 aaKnown RBP eCLIP4.37□□□□□ -1.71
CCNL1-204ENST00000464316 CLIC4Q9Y696 253 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 NEXMIFQ5QGS0 1516 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 RFX7Q2KHR2 1363 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 ABCC6O95255 1503 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 GOLGA8BA8MQT2 603 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 ZEB2O60315 1214 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 SMTNP53814 917 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 NAA25Q14CX7 972 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 SPA17Q15506 151 aa4.37□□□□□ -1.71
CCNL1-204ENST00000464316 WASHC4Q2M389 1173 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms