RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 A0A0G2JLL6 359 aaPredicted RBP12.74□□□□□ -0.37
TMEM54-203ENST00000463914 CXCL11O14625 94 aa12.74□□□□□ -0.37
TMEM54-203ENST00000463914 SEMA3EO15041 775 aa12.74□□□□□ -0.37
TMEM54-203ENST00000463914 CCL5P13501 91 aa12.74□□□□□ -0.37
TMEM54-203ENST00000463914 PTPRAP18433 802 aa12.74□□□□□ -0.37
TMEM54-203ENST00000463914 HOXD10P28358 340 aa12.74□□□□□ -0.37
TMEM54-203ENST00000463914 CCDC102BQ68D86 513 aa12.74□□□□□ -0.37
TMEM54-203ENST00000463914 CHRDL2Q6WN34 429 aa12.74□□□□□ -0.37
TMEM54-203ENST00000463914 PRRT2Q7Z6L0 340 aaPredicted RBP12.74□□□□□ -0.37
TMEM54-203ENST00000463914 CCDC84Q86UT8 332 aaPredicted RBP12.74□□□□□ -0.37
TMEM54-203ENST00000463914 DZIP1Q86YF9 867 aaKnown RBP12.74□□□□□ -0.37
TMEM54-203ENST00000463914 ZSCAN29Q8IWY8 852 aaPredicted RBP12.74□□□□□ -0.37
TMEM54-203ENST00000463914 MEIS3Q99687 375 aa12.74□□□□□ -0.37
TMEM54-203ENST00000463914 DDX4Q9NQI0 724 aaKnown RBP12.74□□□□□ -0.37
TMEM54-203ENST00000463914 PICK1Q9NRD5 415 aa12.74□□□□□ -0.37
TMEM54-203ENST00000463914 DDTLA6NHG4 134 aaPredicted RBP12.73□□□□□ -0.37
TMEM54-203ENST00000463914 ENTPD3O75355 529 aa12.73□□□□□ -0.37
TMEM54-203ENST00000463914 GJB1P08034 283 aa12.73□□□□□ -0.37
TMEM54-203ENST00000463914 IL15P40933 162 aaPredicted RBP12.73□□□□□ -0.37
TMEM54-203ENST00000463914 GJA8P48165 433 aa12.73□□□□□ -0.37
TMEM54-203ENST00000463914 FCGRTP55899 365 aa12.73□□□□□ -0.37
TMEM54-203ENST00000463914 GADL1Q6ZQY3 521 aa12.73□□□□□ -0.37
TMEM54-203ENST00000463914 UBE2Q1Q7Z7E8 422 aa12.73□□□□□ -0.37
TMEM54-203ENST00000463914 IDI2Q9BXS1 227 aa12.73□□□□□ -0.37
TMEM54-203ENST00000463914 RNF208Q9H0X6 261 aa12.73□□□□□ -0.37
TMEM54-203ENST00000463914 UNC93B1Q9H1C4 597 aa12.73□□□□□ -0.37
TMEM54-203ENST00000463914 BIN2Q9UBW5 565 aaPredicted RBP12.73□□□□□ -0.37
TMEM54-203ENST00000463914 ZHX2Q9Y6X8 837 aa12.73□□□□□ -0.37
TMEM54-203ENST00000463914 LOC285556D6RIA3 1793 aa12.73□□□□□ -0.37
TMEM54-203ENST00000463914 ALPK3Q96L96 1907 aa12.72□□□□□ -0.37
TMEM54-203ENST00000463914 FAM196BA6NMK8 535 aa12.72□□□□□ -0.37
TMEM54-203ENST00000463914 ELNP15502 786 aa12.72□□□□□ -0.37
TMEM54-203ENST00000463914 BTDP43251 543 aa12.72□□□□□ -0.37
TMEM54-203ENST00000463914 PICALMQ13492 652 aa12.72□□□□□ -0.37
TMEM54-203ENST00000463914 ZGPATQ8N5A5 531 aaKnown RBP12.72□□□□□ -0.37
TMEM54-203ENST00000463914 NKX2-3Q8TAU0 364 aa12.72□□□□□ -0.37
TMEM54-203ENST00000463914 DPF3Q92784 378 aa12.72□□□□□ -0.37
TMEM54-203ENST00000463914 COPRSQ9NQ92 184 aa12.72□□□□□ -0.37
TMEM54-203ENST00000463914 ABCF2Q9UG63 623 aa12.72□□□□□ -0.37
TMEM54-203ENST00000463914 NOB1Q9ULX3 412 aaKnown RBP12.72□□□□□ -0.37
TMEM54-203ENST00000463914 AFG3L2Q9Y4W6 797 aa12.72□□□□□ -0.37
TMEM54-203ENST00000463914 MROH7-TTC4A0A0A0MT08 1334 aa12.71□□□□□ -0.37
TMEM54-203ENST00000463914 TRIM75PA6NK02 468 aa12.71□□□□□ -0.37
TMEM54-203ENST00000463914 FARP2O94887 1054 aaPredicted RBP12.71□□□□□ -0.37
TMEM54-203ENST00000463914 TIMM10P62072 90 aa12.71□□□□□ -0.37
TMEM54-203ENST00000463914 UBXN2AP68543 259 aa12.71□□□□□ -0.37
TMEM54-203ENST00000463914 SLAIN1Q8ND83 568 aa12.71□□□□□ -0.37
TMEM54-203ENST00000463914 U2AF1L4Q8WU68 220 aaKnown RBP12.71□□□□□ -0.37
TMEM54-203ENST00000463914 RBM27Q9P2N5 1060 aaKnown RBP12.71□□□□□ -0.37
TMEM54-203ENST00000463914 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.71□□□□□ -0.37
TMEM54-203ENST00000463914 SIPA1L1O43166 1804 aa12.71□□□□□ -0.38
TMEM54-203ENST00000463914 PDS5AQ29RF7 1337 aaKnown RBP12.7□□□□□ -0.38
TMEM54-203ENST00000463914 A0A1B0GUL7 405 aa12.7□□□□□ -0.38
TMEM54-203ENST00000463914 ADCY3O60266 1144 aa12.7□□□□□ -0.38
TMEM54-203ENST00000463914 INHAP05111 366 aa12.7□□□□□ -0.38
TMEM54-203ENST00000463914 FLT3LGP49771 235 aa12.7□□□□□ -0.38
TMEM54-203ENST00000463914 RHBDL3P58872 404 aa12.7□□□□□ -0.38
TMEM54-203ENST00000463914 PI16Q6UXB8 463 aa12.7□□□□□ -0.38
TMEM54-203ENST00000463914 FASTKD5Q7L8L6 764 aaKnown RBP12.7□□□□□ -0.38
TMEM54-203ENST00000463914 SMCR8Q8TEV9 937 aaPredicted RBP12.7□□□□□ -0.38
TMEM54-203ENST00000463914 ZNF384Q8TF68 577 aa12.7□□□□□ -0.38
TMEM54-203ENST00000463914 MAST2Q6P0Q8 1798 aa12.7□□□□□ -0.38
TMEM54-203ENST00000463914 TNPO2O14787 897 aaKnown RBP12.69□□□□□ -0.38
TMEM54-203ENST00000463914 ZBTB22O15209 634 aa12.69□□□□□ -0.38
TMEM54-203ENST00000463914 CTNND1O60716 968 aaKnown RBP12.69□□□□□ -0.38
TMEM54-203ENST00000463914 MAP3K10Q02779 954 aa12.69□□□□□ -0.38
TMEM54-203ENST00000463914 MECOMQ03112 1051 aa12.69□□□□□ -0.38
TMEM54-203ENST00000463914 TFCP2Q12800 502 aa12.69□□□□□ -0.38
TMEM54-203ENST00000463914 TREML2Q5T2D2 321 aa12.69□□□□□ -0.38
TMEM54-203ENST00000463914 TRMT2AQ8IZ69 625 aaKnown RBP12.69□□□□□ -0.38
TMEM54-203ENST00000463914 ANKRD13CQ8N6S4 541 aa12.69□□□□□ -0.38
TMEM54-203ENST00000463914 XAGE2Q96GT9 111 aa12.69□□□□□ -0.38
TMEM54-203ENST00000463914 HTATIP2Q9BUP3 242 aa12.69□□□□□ -0.38
TMEM54-203ENST00000463914 API5Q9BZZ5 524 aaKnown RBP12.69□□□□□ -0.38
TMEM54-203ENST00000463914 TAOK2Q9UL54 1235 aa12.69□□□□□ -0.38
TMEM54-203ENST00000463914 SLC45A1Q9Y2W3 748 aa12.69□□□□□ -0.38
TMEM54-203ENST00000463914 CDK5RAP2Q96SN8 1893 aa12.69□□□□□ -0.38
TMEM54-203ENST00000463914 GPR75-ASB3A0A0A6YYF3 556 aa12.68□□□□□ -0.38
TMEM54-203ENST00000463914 ERICH6Q7L0X2 663 aa12.68□□□□□ -0.38
TMEM54-203ENST00000463914 SLF2Q8IX21 1173 aa12.68□□□□□ -0.38
TMEM54-203ENST00000463914 FAM163AQ96GL9 167 aaPredicted RBP12.68□□□□□ -0.38
TMEM54-203ENST00000463914 AGTPBP1Q9UPW5 1226 aa12.68□□□□□ -0.38
TMEM54-203ENST00000463914 PLXNB2O15031 1838 aa12.67□□□□□ -0.38
TMEM54-203ENST00000463914 COL2A1P02458 1487 aaPredicted RBP12.67□□□□□ -0.38
TMEM54-203ENST00000463914 SRGAP3O43295 1099 aa12.67□□□□□ -0.38
TMEM54-203ENST00000463914 SGPL1O95470 568 aa12.67□□□□□ -0.38
TMEM54-203ENST00000463914 IRF5Q13568 498 aa12.67□□□□□ -0.38
TMEM54-203ENST00000463914 MVPQ14764 893 aaKnown RBP12.67□□□□□ -0.38
TMEM54-203ENST00000463914 SPTY2D1Q68D10 685 aaPredicted RBP12.67□□□□□ -0.38
TMEM54-203ENST00000463914 TBC1D9Q6ZT07 1266 aa12.67□□□□□ -0.38
TMEM54-203ENST00000463914 DEFB118Q96PH6 123 aa12.67□□□□□ -0.38
TMEM54-203ENST00000463914 PRO3102Q9H379 93 aa12.67□□□□□ -0.38
TMEM54-203ENST00000463914 HMG20BQ9P0W2 317 aa12.67□□□□□ -0.38
TMEM54-203ENST00000463914 MYO5AQ9Y4I1 1855 aaKnown RBP12.67□□□□□ -0.38
TMEM54-203ENST00000463914 ZBTB7BO15156 539 aaPredicted RBP12.66□□□□□ -0.38
TMEM54-203ENST00000463914 CT47B1P0C2W7 299 aaPredicted RBP12.66□□□□□ -0.38
TMEM54-203ENST00000463914 SPP2Q13103 211 aa12.66□□□□□ -0.38
TMEM54-203ENST00000463914 MTX1Q13505 466 aa12.66□□□□□ -0.38
TMEM54-203ENST00000463914 RRP1BQ14684 758 aaKnown RBP12.66□□□□□ -0.38
TMEM54-203ENST00000463914 PXYLP1Q8TE99 480 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms