RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 CHMP3Q9Y3E7 222 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 COL15A1P39059 1388 aa10.06□□□□□ -0.8
SHQ1-203ENST00000463369 DPYSL4O14531 572 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 BDNFP23560 247 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 TBX4P57082 545 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 CCZ1BP86790 482 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 CCZ1P86791 482 aaPredicted RBP10.05□□□□□ -0.8
SHQ1-203ENST00000463369 JAZF1Q86VZ6 243 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 DZIP3Q86Y13 1208 aaKnown RBP10.05□□□□□ -0.8
SHQ1-203ENST00000463369 ZBTB9Q96C00 473 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 UBXN6Q9BZV1 441 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 LRRCC1Q9C099 1032 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 IRF2BPLQ9H1B7 796 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 IL25Q9H293 177 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 CLSTN2Q9H4D0 955 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 ZBTB3Q9H5J0 574 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 DMGDHQ9UI17 866 aaKnown RBP10.05□□□□□ -0.8
SHQ1-203ENST00000463369 A0A087WZG4 1122 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 MYO1CO00159 1063 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 ATP8B1O43520 1251 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 IGKV5-2P06315 115 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 CASQ1P31415 396 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 SERPINB4P48594 390 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 GYS2P54840 703 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 RPUSD2Q8IZ73 545 aaKnown RBP10.05□□□□□ -0.8
SHQ1-203ENST00000463369 FBXO22Q8NEZ5 403 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 MYD88Q99836 296 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 USP44Q9H0E7 712 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 DNAJC25Q9H1X3 360 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 EXOC6BQ9Y2D4 811 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 RTCBQ9Y3I0 505 aaKnown RBP10.05□□□□□ -0.8
SHQ1-203ENST00000463369 COL4A3BPQ9Y5P4 624 aa10.05□□□□□ -0.8
SHQ1-203ENST00000463369 CCDC69A6NI79 296 aa10.04□□□□□ -0.8
SHQ1-203ENST00000463369 NEURL1BA8MQ27 555 aa10.04□□□□□ -0.8
SHQ1-203ENST00000463369 POLR3GO15318 223 aaPredicted RBP10.04□□□□□ -0.8
SHQ1-203ENST00000463369 LARGE1O95461 756 aa10.04□□□□□ -0.8
SHQ1-203ENST00000463369 MMP14P50281 582 aa10.04□□□□□ -0.8
SHQ1-203ENST00000463369 ST5P78524 1137 aa10.04□□□□□ -0.8
SHQ1-203ENST00000463369 GPS2Q13227 327 aa10.04□□□□□ -0.8
SHQ1-203ENST00000463369 TCIRG1Q13488 830 aa10.04□□□□□ -0.8
SHQ1-203ENST00000463369 CWF19L2Q2TBE0 894 aaKnown RBP10.04□□□□□ -0.8
SHQ1-203ENST00000463369 MYSM1Q5VVJ2 828 aa10.04□□□□□ -0.8
SHQ1-203ENST00000463369 TMCO3Q6UWJ1 677 aa10.04□□□□□ -0.8
SHQ1-203ENST00000463369 FILIP1Q7Z7B0 1213 aa10.04□□□□□ -0.8
SHQ1-203ENST00000463369 CCDC83Q8IWF9 413 aa10.04□□□□□ -0.8
SHQ1-203ENST00000463369 RASEFQ8IZ41 740 aa10.04□□□□□ -0.8
SHQ1-203ENST00000463369 SMARCE1Q969G3 411 aa10.04□□□□□ -0.8
SHQ1-203ENST00000463369 CAMKK2Q96RR4 588 aa10.04□□□□□ -0.8
SHQ1-203ENST00000463369 TINF2Q9BSI4 451 aa10.04□□□□□ -0.8
SHQ1-203ENST00000463369 LRRFIP2Q9Y608 721 aaKnown RBP10.04□□□□□ -0.8
SHQ1-203ENST00000463369 VPS37CA5D8V6 355 aaPredicted RBP10.03□□□□□ -0.8
SHQ1-203ENST00000463369 CAMTA2O94983 1202 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 GNAI3P08754 354 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 GTF2A1P52655 376 aaPredicted RBP10.03□□□□□ -0.8
SHQ1-203ENST00000463369 IQCB1Q15051 598 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 HLFQ16534 295 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 ZSCAN26Q16670 478 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 ARHGAP29Q52LW3 1261 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 WDR78Q5VTH9 848 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 C10orf67Q8IYJ2 551 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 STAG1Q8WVM7 1258 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 ZSCAN31Q96LW9 406 aaPredicted RBP10.03□□□□□ -0.8
SHQ1-203ENST00000463369 RPS6KC1Q96S38 1066 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 BEGAINQ9BUH8 593 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 ARGLU1Q9NWB6 273 aaPredicted RBP10.03□□□□□ -0.8
SHQ1-203ENST00000463369 CWC15Q9P013 229 aaKnown RBP10.03□□□□□ -0.8
SHQ1-203ENST00000463369 CCDC189A1A4V9 331 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 GOLGA6L4A6NEF3 574 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 GOLGA6L19H0YKK7 550 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 UTYO14607 1347 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 TRIM28Q13263 835 aaKnown RBP10.03□□□□□ -0.8
SHQ1-203ENST00000463369 SF3B2Q13435 895 aaKnown RBP10.03□□□□□ -0.8
SHQ1-203ENST00000463369 SNW1Q13573 536 aaKnown RBP10.03□□□□□ -0.8
SHQ1-203ENST00000463369 GCKRQ14397 625 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 COL24A1Q17RW2 1714 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 HSP90AB3PQ58FF7 597 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 LRRN4CLQ8ND94 238 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 UCN2Q96RP3 112 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 ISCA1Q9BUE6 129 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 SCAND2PQ9GZW5 306 aaPredicted RBP10.03□□□□□ -0.8
SHQ1-203ENST00000463369 ZSWIM4Q9H7M6 989 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 SH2B1Q9NRF2 756 aaPredicted RBP10.03□□□□□ -0.8
SHQ1-203ENST00000463369 TFIP11Q9UBB9 837 aaKnown RBP10.03□□□□□ -0.8
SHQ1-203ENST00000463369 LCMT1Q9UIC8 334 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 FARP1Q9Y4F1 1045 aaPredicted RBP10.03□□□□□ -0.8
SHQ1-203ENST00000463369 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.03□□□□□ -0.88e-9■■■■■ 31.5
SHQ1-203ENST00000463369 COMMD10Q9Y6G5 202 aa10.03□□□□□ -0.8
SHQ1-203ENST00000463369 LAMB2P55268 1798 aa10.02□□□□□ -0.8
SHQ1-203ENST00000463369 AOX1Q06278 1338 aa10.02□□□□□ -0.81
SHQ1-203ENST00000463369 ATP5J2-PTCD1G3V325 749 aa10.02□□□□□ -0.81
SHQ1-203ENST00000463369 SGSM2O43147 1006 aa10.02□□□□□ -0.81
SHQ1-203ENST00000463369 TUBB4AP04350 444 aa10.02□□□□□ -0.81
SHQ1-203ENST00000463369 EN1Q05925 392 aaPredicted RBP10.02□□□□□ -0.81
SHQ1-203ENST00000463369 BIRC2Q13490 618 aa10.02□□□□□ -0.81
SHQ1-203ENST00000463369 EZH2Q15910 746 aaKnown RBP10.02□□□□□ -0.81
SHQ1-203ENST00000463369 ICE2Q659A1 982 aa10.02□□□□□ -0.81
SHQ1-203ENST00000463369 CCDC191Q8NCU4 936 aa10.02□□□□□ -0.81
SHQ1-203ENST00000463369 TMUB1Q9BVT8 246 aa10.02□□□□□ -0.81
SHQ1-203ENST00000463369 LSG1Q9H089 658 aaKnown RBP10.02□□□□□ -0.81
SHQ1-203ENST00000463369 TMX4Q9H1E5 349 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms